Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_02236 LG1 28391333 28393901 hypothetical protein
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   signal transduction
Cellular Component   located in   plasma membrane
Molecular Function   enables   kinase activity
SNP Position Effect Amino acid change
T/C 28391377 missense_variant p.Gln344Arg
T/A 28391665 downstream_gene_variant
A/T 28391674 downstream_gene_variant
C/T 28391721 downstream_gene_variant
G/A 28391726 downstream_gene_variant
A/G 28391730 downstream_gene_variant
C/G 28391744 downstream_gene_variant
G/A 28391745 downstream_gene_variant
C/A,T 28391749 downstream_gene_variant
C/A 28391753 downstream_gene_variant
T/A 28391754 downstream_gene_variant
C/A 28391803 downstream_gene_variant
C/T 28391871 downstream_gene_variant
G/T 28392021 intron_variant
C/T 28392158 intron_variant
T/C 28392161 intron_variant
C/T 28392191 intron_variant
C/T 28392322 synonymous_variant p.Arg325Arg
T/C 28392324 missense_variant p.Arg325Gly
G/T 28392329 missense_variant p.Ser323Tyr
G/A 28392337 synonymous_variant p.Ile320Ile
A/G 28392386 missense_variant p.Ile304Thr
T/C,A 28392444 missense_variant p.Ile285Phe
T/C 28392555 missense_variant p.Ile248Val
C/T 28392624 missense_variant p.Gly225Arg
C/A 28392660 missense_variant p.Asp213Tyr
C/A 28392717 missense_variant p.Val194Phe
G/T 28392744 missense_variant p.Arg185Ser
A/G 28392793 synonymous_variant p.Asn168Asn
A/G 28392803 missense_variant p.Leu165Pro
G/A 28392826 synonymous_variant p.Cys157Cys
T/G 28392838 synonymous_variant p.Ser153Ser
A/T 28392863 missense_variant p.Leu145Gln
C/T 28392896 missense_variant p.Cys134Tyr
C/T 28392923 missense_variant p.Ser125Asn
A/C 28392968 missense_variant p.Val110Gly
C/A 28392971 missense_variant p.Ser109Ile
G/A,T 28392975 stop_gained p.Gln108*
C/A 28392983 missense_variant p.Cys105Phe
T/C 28392993 missense_variant p.Ile102Val
A/T 28393031 missense_variant p.Ile89Lys
G/A 28393035 synonymous_variant p.Leu88Leu
A/G 28393055 missense_variant p.Phe81Ser
C/G 28393071 missense_variant p.Gly76Arg
C/A 28393131 missense_variant p.Asp56Tyr
G/A 28393136 missense_variant p.Pro54Leu
A/G 28393142 missense_variant p.Val52Ala
A/T 28393155 missense_variant p.Tyr48Asn
C/T 28393160 missense_variant p.Ser46Asn
G/A 28393200 stop_gained p.Gln33*
A/C 28393234 synonymous_variant p.Leu21Leu
C/A 28393241 missense_variant p.Ser19Ile
G/A 28393279 intron_variant
C/T 28393285 intron_variant
C/T 28393295 intron_variant
C/T,* 28393310 intron_variant
A/T 28393342 intron_variant
C/A 28393595 intron_variant
G/A 28393601 intron_variant
A/C 28393646 intron_variant
A/T 28393681 intron_variant
A/T 28393682 intron_variant
C/G 28393890 synonymous_variant p.Ala4Ala

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_02236.1
MMLAKTIISLRKNTGSNLSLLDLHANQLQGKLQIFPVRAIYLDYSSNYFSFVIPSDVGTRLSSIVFLSLSKNNLSGSIPQFLCNSSQLIVLDVSYNNFAWTIPECLTQSVTIKVLNLQHNKFNGSIPDKFPVSCALKTLDLNSNLLKGPIPKSLQNCSSLEVLDLGNNEVDDGFPYFLNSISTIRVLVLRGNKVHGHIECADNSTWPMLQIFDVAFNKFSGLLPGKCFKTWKAMKLDEYHDASKFSRIGSAVLTFGGIYYQDSVTLTIKGLELDFVKVLNLVTSIDCSSNNFNGTIPEELMDFIGLYALNLSHNGLTGQIPSSIRNLTQLESLDLSSNNLGGTFNDRCIPFEPDSVCE*


CDS Sequence:
>Vu_02236.1
ATGATGCTTGCGAAAACCATCATAAGTTTAAGAAAGAACACTGGTTCCAATCTGAGCCTCCTTGACCTTCATGCTAACCAACTCCAAGGGAAGCTTCAGATATTTCCAGTGCGTGCCATTTATTTGGACTATTCAAGCAATTATTTCAGTTTCGTTATTCCGTCAGATGTTGGTACTCGTCTGTCTTCCATAGTTTTTCTGTCTCTGTCCAAAAATAATTTATCTGGGAGTATTCCTCAATTCTTGTGCAATAGTTCACAGCTGATAGTTCTGGATGTTTCTTATAATAACTTCGCTTGGACAATTCCAGAGTGCTTAACACAGAGTGTGACAATTAAGGTATTAAATCTGCAACATAACAAGTTTAATGGCAGCATTCCAGATAAATTTCCAGTATCTTGTGCTCTGAAGACTCTGGATCTCAATAGTAATCTATTGAAGGGGCCAATTCCTAAATCACTACAAAATTGCTCATCATTAGAGGTGTTGGATCTTGGAAACAATGAGGTAGATGATGGATTTCCATACTTCCTAAATTCAATATCCACAATCCGTGTTCTGGTTTTGAGGGGAAACAAAGTTCATGGTCACATTGAATGTGCTGATAACAGTACTTGGCCAATGCTTCAAATTTTTGATGTGGCTTTCAACAAATTTAGTGGTTTACTTCCAGGAAAATGTTTCAAAACATGGAAGGCAATGAAGCTTGACGAATATCATGATGCATCAAAGTTCAGTCGCATAGGATCTGCGGTCCTTACATTTGGTGGTATATATTATCAGGATTCTGTGACACTTACAATCAAAGGTTTGGAGTTGGACTTTGTTAAAGTCCTAAATCTCGTCACATCTATTGACTGCTCATCCAACAATTTTAATGGAACAATACCTGAAGAGCTTATGGATTTTATTGGACTTTATGCTCTCAACTTGTCTCATAATGGTTTAACAGGCCAAATCCCTTCATCTATAAGGAATTTAACACAGCTTGAGTCATTGGACCTGTCAAGCAACAATCTTGGTGGTACATTCAATGATCGTTGTATTCCATTTGAACCTGATTCCGTCTGTGAGTAG


Promoter Sequence:
>Vu_02236::LG1:28393901-28395901(-)
ATTTTATAATGAGATTCTAAGATATCTAAAGTTTTTATATAATATATGGAATTGTCTCATGTGTTTATGTTGATTTTCCACTAGTAACCTATTAAATTTTGGCAAGGCATTTAGTAGGTCAATTTTGAGCTTATACTCCTCATTTGGGTATTGTATGTTTGTGTTTATGATGGTATTATTAGAGGTAGTTAATTTGTTGATGGTTGTTTGATTCATATGTCTGGGTTTAGGTTAGGTGAAGGATCATAAGATATGTTTATGAATGAAGGGGATGAACGTGGTATGACTTTAGTAGTGGCTTCAAATGTTTAAGATGTTCCCTTAATAGTACACCCAAAATGCAATACGTAGTCCACATGAAAGTTTCCTCTGCTTTTGACTTCTTTTTTCTTGATCTTGCTTTGGAGAAAGATGTAACAAGAAAAGAAGTTAAGATGTTATTGGATTCACTTCCAGGAAAGAGAGGTGCATCATAACAGACAACTTAAATATCATAACAATAAATGAAATATCAAATTAATAAAAGGCCCCTAAAACAATTATATTAAGAAAGGTTGATTTCACTACTCTTTCAAAATAAATTCTTCATTGATTAGCTAAAGATTATTGTTAAATTTTGTTATTTTTTTAGATTTTCAAATCAATCAATGCAAAGTCTCAATTGATTTGTTTGCATTATCACTTTTAACCAAAGTACAATTTCAATTAGAAGTGAGAACTTTTAAATGATCTATAGTAAATTCAACCAAAATACAATTTGAATAGAAATTTACTATACTTAATCATGTTTGTCCATTTTCCTATTCAGCAAGTAAAAAGTTAGTTAATCAAAGTAAAGTCTTGACTTATTCAGTTAAAATGATTACCTCTAATCAAAATAAAGTCTCAATTATTGGTAAAATGTCATTTAATCACATGAAACTTTCTAAATAAAATTAAAGTATGGTCTCAATTAAATTTGAAAACCTCAATTATTGATAAAAAATTATTTACTCATATGAAAGTTTCTAAACTAAATATTAGTCTCAATTAGATTTAAAAACCTCAATTATTGGTAAAAATTAATTTAATCACATAAAAATTTCTAAATTAAATCAAAGTACAGTCTCAATTAGATTTAAAAATCCTTAAATTCATTTGATTAACATACATATAGATTAAAAACATCTCATTAATTAGCTACAATATAAAAATTATTACTTTTTACTTGACTCGGAAACAAAAGAAATAGTAAACGAAAACCACAACAATAATAACAAAAACAAAGAAATTAATTATTTTTAACCTTAGAATCTATTATGAAACTACGAGGAATCAACTTAAAAGCTCAACATTCTATTGATGTGGTGGTGATATACATAATGAATGAAAGAAAAAATGAAAAAAGAAGTGAAAGAAAGTGAGAGATGTGATGAACGATATCTATCAAAATCAAAGTTATACTAAGACTCTTTTTTCTGCTTCTCTTAGGTATCTTATATAAAACTTGGTATGAGCTTTGGGTCTGATTTTTCTGTTACTATAACTTCAAGGATAGTTGTTAATATTCTACAGAAATTATCTTTTAAATACTTTTATTTTCTTCCATTACTGGTTTTTCTGATATTGATTGGAAATCAAGACCTTGATGATAGGAAAACAACCACGGGAAGAATGTTGCCTTTTGGATCTCTCAAAATAGCGTGTCGTGATCAAAAGCATCACTGAGACTAAAAACAGAAGCGTAAGTGCTGTCCTTACTGAAATTTTTTGGATCTCTTGTCTTCTGCATGAGCTGCACATTACCTTAGACGTTCTCACTATCTATTCTAGCAATTTAGGAGTTGTTTTACTTGTTGCCAGCCCTGTTCTTCATTCTCATTCTAAACACTGACTTAGACATGTGATCATGTTCAGAAAAAGCTTCATCATTCAATGCATCTTCCTCACAAACTTTAAATTACTGATCTTCTCGTCAAACCTTTATCTGATCTTCTTTCAAATGTTTTCGAGATAAACTC


Gene Sequence:
>Vu_02236(-)
ATGATGCTTGCGAAAACCATCATAAGTTTAAGAAAGGTCGTTAATGTATACAGTAATACACTAAATAAACCCACTTAGGTTTTCACTCCTATAGCTAGCTTGTATCACAAACTTTCTGTAATAATAATAATAATAATCTTCTATTATCTGTTTCCCTTTCTTAACAACCACGTTTTAAACTTTATTCAAACTACTCTTAAAGCTAACATTTCATTTAAATTTTTTCAAATTTGTTTAATACAAATTGATATCAACTTAGGCAGAAGTCAATTATTTTTTTTTAATTTTTAAATTCTAATTCTTACAGAGAAATATATTTAAACAGATAAAAAATGTTGGTTTAATACCTCTTTTGGTCCCTCGAAAGGGGGCAAATGTTCAATTCGGTCCTACCTTTTTTTAGAAGTTCAATGTGGTCCCAACTTTTGTAAAAAGTGTGCAATCAAGTCCTTTTTGGAAACAACATTGAGTTTTTAACGGAGCAGCTGACAGGGTGGACTGAAGTTAGCTACGTGGCTGTGTGTGGGTAATACGTGGCTGTGAGAGGGTGATACGTGGCTGTGAGAGGGTAAATGTGATAATATTACTGAGGTTAAGAAATCAGAAGTTAGGGTTTGAGTTGCAGAGAAGGATCTGTGCAGAACACTGGTTCCAATCTGAGCCTCCTTGACCTTCATGCTAACCAACTCCAAGGGAAGCTTCAGATATTTCCAGTGCGTGCCATTTATTTGGACTATTCAAGCAATTATTTCAGTTTCGTTATTCCGTCAGATGTTGGTACTCGTCTGTCTTCCATAGTTTTTCTGTCTCTGTCCAAAAATAATTTATCTGGGAGTATTCCTCAATTCTTGTGCAATAGTTCACAGCTGATAGTTCTGGATGTTTCTTATAATAACTTCGCTTGGACAATTCCAGAGTGCTTAACACAGAGTGTGACAATTAAGGTATTAAATCTGCAACATAACAAGTTTAATGGCAGCATTCCAGATAAATTTCCAGTATCTTGTGCTCTGAAGACTCTGGATCTCAATAGTAATCTATTGAAGGGGCCAATTCCTAAATCACTACAAAATTGCTCATCATTAGAGGTGTTGGATCTTGGAAACAATGAGGTAGATGATGGATTTCCATACTTCCTAAATTCAATATCCACAATCCGTGTTCTGGTTTTGAGGGGAAACAAAGTTCATGGTCACATTGAATGTGCTGATAACAGTACTTGGCCAATGCTTCAAATTTTTGATGTGGCTTTCAACAAATTTAGTGGTTTACTTCCAGGAAAATGTTTCAAAACATGGAAGGCAATGAAGCTTGACGAATATCATGATGCATCAAAGTTCAGTCGCATAGGATCTGCGGTCCTTACATTTGGTGGTATATATTATCAGGATTCTGTGACACTTACAATCAAAGGTTTGGAGTTGGACTTTGTTAAAGTCCTAAATCTCGTCACATCTATTGACTGCTCATCCAACAATTTTAATGGAACAATACCTGAAGAGCTTATGGATTTTATTGGACTTTATGCTCTCAACTTGTCTCATAATGGTTTAACAGGCCAAATCCCTTCATCTATAAGGAATTTAACACAGCTTGAGTCATTGGACCTGTCAAGCAACAATCTTGGTGGTGAAATTCCCACACATCTTGAACTTTTAAATTTCCTCTCAGTCTTGAACCTCTCCTCTTCATTGCTGCAATTGCATGACAGCATGGAATGACACTAATCATCCACTTTCTACAGCTACACGACGAACACGACAACCATGGGATTATCCCACAGTAACAAGTAGGGATTATCCCACCTCCTCTCACACCACAACCATGGGACCACCCAGAAGATCCTTTGCCCCAACTTCTCGAACACGACGAACACCCTTCAGAAGAAGCCATTCGTATCTCAAATTACCAATTTCTCTGCAACTCAAACCCTAACTTCTGATTTCTTAACCTCAGTAATATTATCACATTTACCCTCTCACAGCCACGTATGACCCTCTCACAGCCACGTATTACCCACACACAGCCACGTAGCTAACTTCAGTCCACCCTGTCAGCTGCTCCGTTAAAAACTCAACGCCGTTTCCAAAAAGGACTTGATTGCACACTTTTTACAAAAGTTGGGACCACATTGAACTTCTAAAAAAAGGTAGGACCGAATTGAACATTTGTCCCCTTTCGAGGGACCAAAAGAGGTATTAAACCAAAAATATTTTATAAAATAAAATAATCAAGAATCATACAACAAAAAAGATTTTATAGTAAATAATTTGTTTTTTCTACAACTTGCCCATCAATTTTGTTTAAAATACTCACAAATATACTGGCATAATAATCACCGGTTAGGTTCAGGAAAAAAAATTAAACATTTTTCTAAAGGTTGTAGCCACATGAAATGACCTAATCATTTTTTTCTATGGCAGACCCAAATATTTCGTAATCATTAACTCAACACGAAAGTTAAAAGGAATTAAAGTCAAATTTGGTTTTTGACAAACCAGTTGTGCAAATTAAAGGTACATTCAATGATCGTTGTATTCCATTTGAACCTGATTCCGTCTGTGAGTAG