Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_02231 LG1 28333635 28335502 PREDICTED: rust resistance kinase Lr10-like
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/T 28334303 missense_variant p.Cys372Tyr
T/A 28334665 missense_variant p.Arg251Ser
G/T 28334729 missense_variant p.Ser230Tyr
G/T 28334784 intron_variant
C/A 28334788 intron_variant
C/G 28334810 intron_variant
G/A 28334825 splice_region_variant&intron_variant
G/A 28334879 synonymous_variant p.Cys208Cys
C/A 28334952 missense_variant p.Ser184Ile
G/C 28334990 missense_variant p.Asn171Lys
T/C 28335000 missense_variant p.Asp168Gly
C/G 28335003 missense_variant p.Arg167Pro
G/C 28335017 synonymous_variant p.Val162Val
T/A 28335070 missense_variant p.Ile145Phe
A/C 28335074 missense_variant p.Asn143Lys
T/G 28335077 missense_variant p.Glu142Asp
T/A 28335104 synonymous_variant p.Ser133Ser
C/T 28335152 synonymous_variant p.Leu117Leu
A/T,C 28335153 missense_variant p.Leu117Arg
A/G 28335179 synonymous_variant p.Asn108Asn
G/A 28335208 missense_variant p.Leu99Phe
G/A 28335243 missense_variant p.Ser87Leu
A/G 28335389 synonymous_variant p.Phe38Phe
G/A 28335454 synonymous_variant p.Leu17Leu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_02231.1
MLNFQNLALVLTVLLLLWKPAICKNGCTEKCGSIHIQFPFHLRNSKLNHTMGYPRGFDLLCTDADETVMDLPSVPIKLYVQSIDYKSQQIQLYDPQNCLPRQLMKLGNSSISPFQFLSNRDRDVSFFRCNSMSCPILQLDSENDILDPEIVSCTKLSDVYSVQWYVRDYLNNTVVAEWTSPNCSSCEAQGSKCRYKNGTQSEVECFVCPTNGLPTSTIVLIAAGGFGGFLLVLLLAKALFHVHDHYKMKGEDQARIEKFLEDYKAMKPTRFTYADIKRITNGFSESLGEGAHGAVFKGMLSRDILVAVKILNDAVGDGKDFINEVGTMGKIHHVNVVRLLGFCADGFHRALVYDFFPNGSLQRFLAPPDNKDVFLVEESFQVLYPEWIHNLVEARDVEVTIEEEGDAKIARKLAIIGLWCIQWNPVDRPSMKTVVQMLEGDGDKLIAPPTPFDKTGSSRTNAAVQTRHQNFELEIIHEMEE*


CDS Sequence:
>Vu_02231.1
ATGCTAAATTTTCAAAATCTCGCTCTTGTGCTGACGGTGTTGCTTCTGCTATGGAAGCCTGCCATATGCAAAAATGGGTGCACGGAAAAGTGTGGCTCCATTCACATTCAATTTCCATTTCACCTCAGAAATAGCAAGTTGAATCACACCATGGGCTATCCTCGTGGGTTCGATCTGTTGTGTACGGATGCAGATGAGACTGTGATGGATCTGCCTTCTGTTCCAATAAAATTGTATGTCCAAAGCATAGATTACAAGTCACAGCAAATCCAACTCTACGACCCTCAAAATTGCCTTCCTAGGCAGCTCATGAAGCTCGGCAATTCCTCTATTTCACCATTTCAATTCCTGTCAAATAGGGACCGGGATGTTTCCTTCTTCCGCTGCAACTCAATGTCATGCCCAATTTTGCAACTTGATTCTGAAAATGACATTCTTGATCCCGAGATAGTATCGTGCACAAAGTTGAGTGATGTTTACTCCGTCCAGTGGTATGTACGGGATTATTTGAACAACACCGTGGTTGCGGAATGGACCAGCCCCAATTGCAGTTCCTGTGAAGCACAAGGAAGTAAATGTAGATACAAGAATGGTACCCAAAGTGAAGTTGAATGTTTTGTTTGCCCCACAAACGGGCTTCCAACATCAACTATTGTACTTATCGCAGCAGGGGGATTCGGTGGTTTCCTTCTTGTGCTGCTTTTGGCCAAGGCTTTGTTTCATGTGCATGACCATTATAAGATGAAAGGAGAAGACCAAGCTCGAATAGAGAAATTCTTGGAGGATTACAAGGCAATGAAGCCTACAAGATTCACTTACGCTGACATTAAGAGAATCACAAATGGGTTTAGTGAGAGTTTGGGAGAAGGAGCTCATGGAGCAGTGTTCAAGGGAATGCTCTCCCGCGATATTCTCGTTGCTGTGAAGATACTCAATGACGCTGTTGGAGATGGAAAGGATTTCATAAACGAAGTGGGAACAATGGGCAAAATTCATCATGTTAATGTTGTTCGCTTGCTTGGATTCTGTGCTGATGGATTCCACCGTGCTCTTGTCTATGATTTCTTCCCAAATGGATCACTGCAGAGATTCTTGGCTCCACCAGACAACAAGGATGTTTTCCTTGTGGAGGAAAGTTTCCAAGTTCTGTACCCTGAGTGGATCCATAATTTGGTGGAAGCACGAGACGTGGAAGTTACAATTGAGGAGGAGGGAGATGCTAAAATTGCTAGGAAACTTGCCATTATAGGACTTTGGTGTATTCAGTGGAACCCAGTGGACCGTCCATCCATGAAAACTGTGGTACAAATGCTTGAAGGAGATGGAGACAAGTTAATTGCACCCCCTACTCCTTTTGATAAGACCGGTTCCTCAAGAACAAATGCAGCTGTTCAAACAAGACACCAGAATTTCGAGTTGGAAATTATTCATGAAATGGAAGAGTAA


Promoter Sequence:
>Vu_02231::LG1:28335502-28337502(-)
CAATTAGATCGAGTTTAGCCACTCCTGGATCTAACCCTAGACAACTATCTGAATGTTCAACTCAACATGAGCTAAAGAACCAAGTATTTAAGTTCTCTTTAGAATTTACAACAAATCCACAAATGGATTTTCTATAAGGTACAGATAATTAACTCTTAACGAGAGGATGTGTATTCCAATATAATACAATTTATGACACTTGAATGTGTTTCTTTCTTTCACTAAGATTTTTCTCTAAAAGAATATTGAGCTTCAAACGATATAGGTTGACTTTTCTCTCTTTTCACATTACTATTCTTCTTATGTTCTCTTTATTGCGCTTTTTATCAACAACAACTTCTCTTCAAGCTTTCTTCTATACATAGCTTCTCTTGAAAGATGAATGTTAGACAAAAAGTTGACCTTAAGAGAGTAGGTAGACTTTAGATGTGAAGTCAAACTCTACTTTGTAGGCTTCAGAGCTTTTTCTCATAGCCTTAGGTGAAATTGAGCTTGTACGAAGTGACTGAGCTTGTACGAAGTGACTGAGCTTGTACGAAGTGACTAAGCGTAGGGCTTCAAGGGAAATATTCCTAAAATGTTCTTCTTCTCTCATAACCTCTTTTTCTTGGGTGTCATGATTCTGATCATATCTTTCTACTTTATCGATCTACAAGAATACCAAGAACAAAGTATACAAGCATCAAAGTACTTTTTGTACATGCATTTAATGATTTGAACGTTGATAAACGTTAAACAATGTAGCGTATTCAAAACATTTTATCATTTGTCATTTCATTCATAAATGCATCGTTTGGTAAGATAAATGTTTATTCATCAGATGTTATAAACATAAGATGGTCACTTAGGAGACAATGTTTTCTCTAGAAAGCTTTGCTTTATATAGCACTGTATTTGAATGAAAATTTCTTTTAACCCTTAGTGTTATATAAGAGATAGACTTCTGTTTTCATAAGAAGCTAGTTTGTTTTGCTCATGAAGTTTATTAATTGATTCAATGAGAGATACTCTCTTTTAAATGCTATTTATGATTTTCTGAATCATTTAAACATTTTTGTGTAGAAAACATTATTTATAAACCTTGCTCTAGACTTATGAAAAGAGTTTCTCATTAGAGGTTACTATGTTTTTAATATAACAATATTTTATTTAATGCTCTTTGTTAAACTTCAAAATTTGTCTTGCCTAGACAATCTATTTTCTAGACAATTTTGTTTTAATAAAATGTAGAAAATTGAATATTAAATAACTTTCCAAAATTGTTAAGTTTAATTTATTAAGTTTATATTAACGAGTCGGTTTAAAAACTTATTTTAATATTTTGTGGACAATTTTTATTTACTATGTCAAATATAATACATTATTTGTTAACAAGAATTTAAATAACAATGTAAAAGTTATTAAGAAAATGTATTTAAAATTTATCCCACAAATCTCTTTTATAAATTTTAATTTTATTTTTGTAATTTAATTTTTTTTATCAACAACAATTTCAATTTCATTTTAATATAATATTCTCTACTTAAGTATATATTTATATCAAATTTCTAAAACAAAATGAATAATACTCTAATTTTATCAATTATGACAAATATTTTAATCTATCATATCTCGATACATGATTTACAAATTTTTCTTTTAAATTATTCATTCATCTATTCAAATTCTTTAATCCAAATCCAAATAAGAAGGTAATATCCTCTCAATCCCCTCCATTCCACGAAGGAACCGTCTATCACAACCAATCCCCGTCAATACACTAATTACAAGTTACAACTGTTCCTCTGTAATTATTTGTATTAGATAAAGTCAAGTCCACTTTTTGTTTTGGTATGCGAGTCAAGTCCACTATTTAATTTTTGATAAGCAAGCAAGTCCACTTGTCTACTTCCAACGCGGAATCGCAGTTGCACTTACACCCGGCGGCCATTATCTCCTTCTCCAACTTGCACACACACTTTAATTATGCTAAGCATTGCTAAATTTTCTGCAACCACTCA


Gene Sequence:
>Vu_02231(-)
ATGCTAAATTTTCAAAATCTCGCTCTTGTGCTGACGGTGTTGCTTCTGCTATGGAAGCCTGCCATATGCAAAAATGGGTGCACGGAAAAGTGTGGCTCCATTCACATTCAATTTCCATTTCACCTCAGAAATAGCAAGTTGAATCACACCATGGGCTATCCTCGTGGGTTCGATCTGTTGTGTACGGATGCAGATGAGACTGTGATGGATCTGCCTTCTGTTCCAATAAAATTGTATGTCCAAAGCATAGATTACAAGTCACAGCAAATCCAACTCTACGACCCTCAAAATTGCCTTCCTAGGCAGCTCATGAAGCTCGGCAATTCCTCTATTTCACCATTTCAATTCCTGTCAAATAGGGACCGGGATGTTTCCTTCTTCCGCTGCAACTCAATGTCATGCCCAATTTTGCAACTTGATTCTGAAAATGACATTCTTGATCCCGAGATAGTATCGTGCACAAAGTTGAGTGATGTTTACTCCGTCCAGTGGTATGTACGGGATTATTTGAACAACACCGTGGTTGCGGAATGGACCAGCCCCAATTGCAGTTCCTGTGAAGCACAAGGAAGTAAATGTAGATACAAGAATGGTACCCAAAGTGAAGTTGAATGTTTTGTTTGCCCCACAAACGGGCTTCCAACATCAACTATTGTACTTATCGCAGCAGGTATGTGCGGTATCCTTGTTTCGCCGTTTTCTTTCTCTGTTTGTGGTTCTTTGTAAGGTGTCTAACAGAAGATACACCCACAGGGGGATTCGGTGGTTTCCTTCTTGTGCTGCTTTTGGCCAAGGCTTTGTTTCATGTGCATGACCATTATAAGATGAAAGGAGAAGACCAAGCTCGAATAGAGAAATTCTTGGAGGATTACAAGGCAATGAAGCCTACAAGATTCACTTACGCTGACATTAAGAGAATCACAAATGGGTTTAGTGAGAGTTTGGGAGAAGGAGCTCATGGAGCAGTGTTCAAGGGAATGCTCTCCCGCGATATTCTCGTTGCTGTGAAGATACTCAATGACGCTGTTGGAGATGGAAAGGATTTCATAAACGAAGTGGGAACAATGGGCAAAATTCATCATGTTAATGTTGTTCGCTTGCTTGGATTCTGTGCTGATGGATTCCACCGTGCTCTTGTCTATGATTTCTTCCCAAATGGATCACTGCAGAGATTCTTGGCTCCACCAGACAACAAGGATGTTTTCCTTGGTTGGGAGAAGTTGCAACAAATTGCTCTTGGTGTTGCCAAAGGGATTGAGTATCTCCATCTGGGCTGTGATCATAGAATACTTCACTTTGACATCAATCCTCACAATGTTTTGTTAGATGATCACTTCAATCCAAAGATCACTGATTTTGGACTTGCTAAACTGTGTCCTAAAAATCAAAGTACTGTGTCTGTGACTGCAGCCAGGGGAACCTTAGGCTACATTGCCCCTGAAGTTTTCTCAAGAAACTTTGGTAATGTCTCTTATAAGTCTGACATTTACAGCTATGGAATGTTGCTTCTGGAGATGGTAGGAGGAAGAAAGAATACAAATATGTCAGTGGAGGAAAGTTTCCAAGTTCTGTACCCTGAGTGGATCCATAATTTGGTGGAAGCACGAGACGTGGAAGTTACAATTGAGGAGGAGGGAGATGCTAAAATTGCTAGGAAACTTGCCATTATAGGACTTTGGTGTATTCAGTGGAACCCAGTGGACCGTCCATCCATGAAAACTGTGGTACAAATGCTTGAAGGAGATGGAGACAAGTTAATTGCACCCCCTACTCCTTTTGATAAGACCGGTTCCTCAAGAACAAATGCAGCTGTTCAAACAAGACACCAGAATTTCGAGTTGGAAATTATTCATGAAATGGAAGAGTAA