Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_02175 LG1 27347390 27349740 PREDICTED: probable inactive receptor kinase At4g23740
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   protein phosphorylation, developmental growth, meristem development, cellular developmental process, cell division, flavonoid metabolic process, microtubule cytoskeleton organization, cell wall organization, cytokinesis, protein phosphorylation, cytokinesis, gametophyte development, protein phosphorylation, microtubule cytoskeleton organization, cell wall organization
Molecular Function   enables   protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, kinase activity, protein kinase activity, protein kinase activity, protein kinase activity, protein binding, protein binding
SNP Position Effect Amino acid change
C/T 27347518 synonymous_variant p.Ile43Ile
C/T 27347569 synonymous_variant p.Cys60Cys
T/A 27347631 missense_variant p.Ile81Asn
A/C 27347640 missense_variant p.Asn84Thr
C/A 27347645 missense_variant p.Leu86Ile
A/C 27348032 missense_variant p.Asn215His
A/T 27348036 missense_variant p.Asn216Ile
C/T 27348496 synonymous_variant p.Val369Val
G/C 27348553 missense_variant p.Glu388Asp
C/A 27348661 intron_variant
T/A 27348681 intron_variant
A/T 27348730 intron_variant
T/A 27348778 intron_variant
C/T 27348866 intron_variant
C/G 27348889 intron_variant
C/T 27348907 intron_variant
T/A 27348935 intron_variant
A/G 27348938 intron_variant
A/T 27349152 missense_variant p.Ser428Cys
C/A 27349320 missense_variant p.Pro484Thr
C/T 27349352 synonymous_variant p.Ser494Ser
G/A 27349551 missense_variant p.Ala561Thr
T/A 27349611 missense_variant p.Cys581Ser
G/T 27349642 missense_variant p.Gly591Val

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_02175.1
MAKMLGVLLMIGAMMFGVRAEPTEDKQALLDFLHNISHSHHLINWNKSSSVCKSWIGVTCNSEQSHVIALQLTRTGLSGRIPPNTLSRLSALQTVSLASNSITGSFPSDFSQLNNLIYLYLQFNKFSGPLPSDFSVWKNLSIVNLSNNSFNGSIPFSLSNLTHLSSLVLANNTLSGDIPDLTIPTLLELNFANNNLSGVVPESLERFPRGAFSGNNLASSHALSPSFLIKPRNSHPTRKKSKGLREPALLGVIIGACVLGISVITAFVIVCFYEKGGRSGQQVKSQKGEASRKKEGSESRDNNRIVFFEGCTLAFDLEDLLRASAEVLGKGTFGTVYKAALEDVTTVAVKRLKDVIVGKREFEQQMEMVGRIRHDNVAALRAYYYSKEEKLMVYDYYEQGSVSSMLHGKREGSRVSLNWDSRLKIAIGVARGIAHIHAQQGGKLLHGNIKSSNIFLNPRGYGCVSDIGLATLINPATRTTGYRAPEATDTRKSVAASDVYSFGVLLLELLTGRFPLHAKGGEEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEEMVEMLQIGMACVVRTPDQRPKIGDVVRMVEEIRRVNAENRSSTESRSEGSTPTPHSIEIPSTSFAY*


CDS Sequence:
>Vu_02175.1
ATGGCAAAGATGCTGGGTGTCTTGCTCATGATTGGAGCAATGATGTTCGGAGTAAGAGCTGAGCCAACGGAAGATAAACAAGCATTGCTTGATTTCCTTCACAACATTAGCCACTCTCATCATCTGATCAACTGGAACAAGAGCTCTTCTGTGTGCAAAAGTTGGATAGGAGTGACCTGCAACTCTGAGCAATCACATGTTATTGCCCTCCAACTGACCAGAACTGGATTGAGTGGTCGAATCCCACCCAACACTCTTAGCCGTCTCTCAGCGCTCCAAACTGTGAGTCTAGCCTCAAATAGCATAACTGGTTCTTTCCCTTCTGATTTCTCTCAGCTAAATAACTTGATCTATCTGTATCTCCAATTCAACAAATTTTCTGGTCCATTGCCATCAGACTTTTCAGTATGGAAGAATCTTAGTATTGTCAATTTGTCCAACAATTCTTTTAATGGGAGCATCCCATTTTCACTTTCAAATTTGACTCATCTCTCTTCTTTAGTTCTAGCCAACAACACCCTTTCGGGTGACATTCCTGATCTCACTATCCCTACCCTGCTGGAGCTGAATTTTGCCAACAATAACCTTAGTGGGGTTGTGCCCGAATCGTTGGAGAGATTTCCAAGGGGCGCATTTTCTGGTAACAACCTTGCTTCTTCACATGCTCTTTCTCCTTCTTTTCTTATTAAACCCCGAAATTCTCATCCAACAAGGAAAAAATCCAAAGGGCTGCGAGAACCAGCATTGTTGGGTGTCATTATTGGTGCTTGCGTGCTGGGAATTTCAGTGATAACAGCTTTTGTGATTGTGTGTTTCTATGAGAAAGGTGGTAGAAGTGGACAACAAGTGAAGTCTCAGAAAGGAGAAGCATCCAGGAAAAAGGAAGGTTCTGAAAGTCGAGACAACAACAGAATTGTTTTCTTTGAGGGTTGCACTCTTGCATTTGACTTGGAGGACTTGTTGAGAGCATCTGCTGAAGTGCTTGGAAAGGGCACGTTTGGGACAGTGTATAAGGCTGCTCTAGAAGACGTAACAACCGTGGCAGTGAAAAGATTGAAGGATGTCATTGTCGGAAAACGCGAGTTTGAACAACAGATGGAGATGGTCGGGAGGATTAGGCACGATAATGTGGCTGCTTTAAGGGCATATTACTATTCAAAGGAGGAGAAACTTATGGTATATGATTACTACGAACAGGGCAGTGTGTCTTCAATGTTGCATGGCAAAAGAGAAGGAAGTAGAGTTTCTTTAAACTGGGATAGCCGTTTGAAAATAGCAATTGGAGTAGCAAGAGGCATTGCTCACATCCATGCTCAACAAGGAGGAAAACTCCTCCATGGAAACATAAAGTCCTCTAACATCTTCCTCAACCCAAGAGGATATGGTTGTGTATCTGACATTGGTCTTGCAACACTGATAAATCCAGCAACGAGAACAACAGGATACCGTGCCCCAGAAGCCACGGACACCAGAAAATCGGTAGCCGCATCTGATGTCTATAGTTTTGGGGTGCTGCTACTTGAGCTTCTAACTGGGAGGTTTCCCTTACATGCCAAAGGAGGTGAGGAAGTTGTGCACTTGGTTAGATGGGTGAATTCAGTGGTTAGAGAGGAGTGGACTGCAGAAGTGTTTGATGTGGAGTTGCTGAGGTATCCTAATATTGAGGAGGAAATGGTTGAGATGCTGCAAATAGGGATGGCATGTGTTGTGAGAACACCAGATCAGAGGCCAAAAATTGGTGATGTGGTGAGAATGGTGGAGGAAATTCGTAGGGTAAATGCCGAAAATAGATCATCCACTGAATCAAGGTCAGAAGGTTCCACTCCAACCCCTCATTCCATTGAGATACCTTCAACCTCTTTTGCATATTGA


Promoter Sequence:
>Vu_02175::LG1:27345390-27347390(+)
TACCTCATAATCGAGGGTGCAATCTTGGCCAATAGCAGACCTAATCTGCCATTGTTCATCATCCTAATCAGGGGGTTTAGAGGGTCCACGTGGTGCTTCTTCTTTGTCGTTGTCGTCATCTTCAAGATCGCCGAGGTCCTCCGGCTGAACCCGCGAACTGGAAAAAGGGTAGGGTTGGGTTGGAGGGTTCGTTTGGAGGATTCACGCCCCTCAATCAACCCCTTTTGCAGCTTCAATCCTGTAGTTTGATCCATTGAATCTGCATTTTCGCAAAGGAAGAATGGAATTCTCTTCGCATTTCTCCCAGCCTCTCGAAACCTAGCTTCGAAGGTTTTCAATTTGGGGTGAAAATTTTTATTAGAAGAAAAATCTGTGGTTCAGTTAACTGTACTCTAACTGTATAGTTCAATTTCTTTTAACTGTACTGTATAATAGTTTATTTAGTTTTTAGTTAAAAAAAATTTAGTGTTTTTAAGTACAATATAGTATGGTTAACTGTAGTTACAGTACAGTTCATTGAACTATGCCCAGCCCTATCTTTCACAATCTCAAAATACTATAACTTATTTATTTTTGCAGCGGGGTGTTGACACATGTGAACAAAGACAAAACAGCTACTACAACAGCTAATCTGTTTGTATCACTTTCTATGCACCGTTTAATATTTGGATTAGCACAAATGAAACAAATCACGGGCATTCATCCCATTGATATGTCAAACAATTTCAAAGATGAATAATAGTTTTGTAGACTGAAGCCCCTTTTTGTGATAGTGTTTAACGAAATAGGCTATGCTATAGGTAGCTCATGGATCACCTATGCATGTGTGATTGAAGTTCAAGACAAAGTTCATGAGGACATCACTCCTTGTCCATTTTCACATCCTACACTTTTCTATATTATTGTTTTCCGCTCCTTCTGCATTTACGTCTCCATATGCAAGCCGTTGAAAGTTTTCTTAGAATACACGTTATAGACCAAGGGGAAGCAAAAGAAGTAGCACCACCTTAGGATCTGTTACAATCAACAGGTATTTCTTTATGTCTAATGTTTCGATACATTTCAGCATAATCATTGCCTTATTCACAAACTTACATTATAATTTCCATATTTGTCTAGTTACTCCAATAAATTTTTCTACATGGCCCCTTCCAATTCTTTAAAAAAGAAAAACATATCTTAGGTTTCTCACTGATATGTAACTGTTATATTATAATAGTAAGAGCGCCATTATTGAAACGATTCTTACAGGTGAATGGTCCTGGTCTTCTGGACCTACCAGTTTTCTTGCTTTCTCCCTTCCAAAATTCACCACTTTTCTGACCCTTATGTCTTATGGTTGTGTGGTACATTGCCGGTTGTATCTGCACTTTTAACTGATTGGTGAATTTTGGAAGGAGTATGTGAGTATCCCTTTTCTCTATGTATCAAAGTGTCAAGTGCTCTCTGACTTTAGCTCTATAAATCTTAGAATTGGATGATTTCTGTACACCATCCTTGTGTATACATATGGAAAAATGTTTCTGGTCATTTTAAATTCCTCAAAATAGTATTTTCTTTTCATTCGTTTGTCTGCTGGCATGGTCTTGATCACTGGATTATTAACTAGTAAACTGACTCGTCAAAGTATTCGTTTACATCTTTTTGGTGGACATTGGTGGGGAATCAATCAAAGTAGGTGAACAGAAGAAAGATAATAAGGCGATTTTCTATGTCAAACAGGAGCTGCCTATTTTGACGTAAAAAGACACTTTAAAAGTGTCGTTTAGTCTTTTAGATCAAAATCAAAGAAAATAACTACAATATGTCTTACGTCTTATATAATACAAACCGTACAGCCTAACACTTAACATGTCTAAAAAATAACCCCAAATTCTCTTTGTTGTTTTAGATTTGCAAAGACAGCACACACGCTAGCGCTCAATCATCTAATCATTTGTTTGGTCTCCAGTTTGTTGTCCAGGGGAAGTCCTTGTTTTGCATCCATTGGAGCTAGAAAA


Gene Sequence:
>Vu_02175(+)
ATGGCAAAGATGCTGGGTGTCTTGCTCATGATTGGAGCAATGATGTTCGGAGTAAGAGCTGAGCCAACGGAAGATAAACAAGCATTGCTTGATTTCCTTCACAACATTAGCCACTCTCATCATCTGATCAACTGGAACAAGAGCTCTTCTGTGTGCAAAAGTTGGATAGGAGTGACCTGCAACTCTGAGCAATCACATGTTATTGCCCTCCAACTGACCAGAACTGGATTGAGTGGTCGAATCCCACCCAACACTCTTAGCCGTCTCTCAGCGCTCCAAACTGTGAGTCTAGCCTCAAATAGCATAACTGGTTCTTTCCCTTCTGATTTCTCTCAGCTAAATAACTTGATCTATCTGTATCTCCAATTCAACAAATTTTCTGGTCCATTGCCATCAGACTTTTCAGTATGGAAGAATCTTAGTATTGTCAATTTGTCCAACAATTCTTTTAATGGGAGCATCCCATTTTCACTTTCAAATTTGACTCATCTCTCTTCTTTAGTTCTAGCCAACAACACCCTTTCGGGTGACATTCCTGATCTCACTATCCCTACCCTGCTGGAGCTGAATTTTGCCAACAATAACCTTAGTGGGGTTGTGCCCGAATCGTTGGAGAGATTTCCAAGGGGCGCATTTTCTGGTAACAACCTTGCTTCTTCACATGCTCTTTCTCCTTCTTTTCTTATTAAACCCCGAAATTCTCATCCAACAAGGAAAAAATCCAAAGGGCTGCGAGAACCAGCATTGTTGGGTGTCATTATTGGTGCTTGCGTGCTGGGAATTTCAGTGATAACAGCTTTTGTGATTGTGTGTTTCTATGAGAAAGGTGGTAGAAGTGGACAACAAGTGAAGTCTCAGAAAGGAGAAGCATCCAGGAAAAAGGAAGGTTCTGAAAGTCGAGACAACAACAGAATTGTTTTCTTTGAGGGTTGCACTCTTGCATTTGACTTGGAGGACTTGTTGAGAGCATCTGCTGAAGTGCTTGGAAAGGGCACGTTTGGGACAGTGTATAAGGCTGCTCTAGAAGACGTAACAACCGTGGCAGTGAAAAGATTGAAGGATGTCATTGTCGGAAAACGCGAGTTTGAACAACAGATGGAGATGGTCGGGAGGATTAGGCACGATAATGTGGCTGCTTTAAGGGCATATTACTATTCAAAGGAGGAGAAACTTATGGTATATGATTACTACGAACAGGGCAGTGTGTCTTCAATGTTGCATGGTATGCTATCTTGTTAAGATAATCTCCCCTTTAACTACTTCTAGTTAATCTAATTCATCATGACAGACCTAAACAATTAAAATTGGTTTTCTCTAATAGACTGATACAAATATTTGCTATAGCATTCTAAGGCTTATAGTGCTACTTTCATTCGTTTTTTTGGTTCTCCTTACATGCCTAGTAAACTTCTCCATAAGATAACCTCAACTTATGCGCCTTAGTTTTTGAAACGGTTAAATATAAGGAGTTTGTACCGAATTGCATAAATTGATTTTAACTTGGACAAGAAACTTAACTCATTTTATCTTCTTAATTTCTTCTCTTATAAATGATTATGGATATGTTTACCAAGCATGTTCTAAAACCAACAAAGTCACGAGACTTACAACTATGCAACAAAGTTAAACTATGTGGCATCCTACAACTACTTTGAGGGATTGTCTAATGTTAACTATGATTTGGTAACTTTATCAACGCAGGCAAAAGAGAAGGAAGTAGAGTTTCTTTAAACTGGGATAGCCGTTTGAAAATAGCAATTGGAGTAGCAAGAGGCATTGCTCACATCCATGCTCAACAAGGAGGAAAACTCCTCCATGGAAACATAAAGTCCTCTAACATCTTCCTCAACCCAAGAGGATATGGTTGTGTATCTGACATTGGTCTTGCAACACTGATAAATCCAGCAACGAGAACAACAGGATACCGTGCCCCAGAAGCCACGGACACCAGAAAATCGGTAGCCGCATCTGATGTCTATAGTTTTGGGGTGCTGCTACTTGAGCTTCTAACTGGGAGGTTTCCCTTACATGCCAAAGGAGGTGAGGAAGTTGTGCACTTGGTTAGATGGGTGAATTCAGTGGTTAGAGAGGAGTGGACTGCAGAAGTGTTTGATGTGGAGTTGCTGAGGTATCCTAATATTGAGGAGGAAATGGTTGAGATGCTGCAAATAGGGATGGCATGTGTTGTGAGAACACCAGATCAGAGGCCAAAAATTGGTGATGTGGTGAGAATGGTGGAGGAAATTCGTAGGGTAAATGCCGAAAATAGATCATCCACTGAATCAAGGTCAGAAGGTTCCACTCCAACCCCTCATTCCATTGAGATACCTTCAACCTCTTTTGCATATTGA