Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_02059 LG1 25289158 25291234 PREDICTED: probable receptor-like protein kinase At1g11050
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   hormone-mediated signaling pathway, hormone-mediated signaling pathway, response to chitin, response to jasmonic acid, response to water deprivation, hormone-mediated signaling pathway, defense response to bacterium, salicylic acid mediated signaling pathway, defense response to bacterium, response to abscisic acid, response to abscisic acid, regulation of defense response, glucosinolate metabolic process, hormone-mediated signaling pathway, response to oxidative stress, response to jasmonic acid, indole-containing compound metabolic process, response to water deprivation, phosphorylation, defense response to fungus, indole-containing compound metabolic process, defense response to fungus, response to water deprivation, defense response to fungus, glucosinolate metabolic process, salicylic acid mediated signaling pathway, glucosinolate metabolic process, response to wounding, phosphorylation, salicylic acid mediated signaling pathway, defense response to bacterium
Cellular Component   is active in   plasma membrane
Cellular Component   located in   chloroplast
Molecular Function   enables   transmembrane receptor protein tyrosine kinase activity, protein serine/threonine kinase activity, transmembrane receptor protein tyrosine kinase activity, transmembrane receptor protein tyrosine kinase activity, kinase activity, protein serine/threonine kinase activity, transmembrane receptor protein tyrosine kinase activity, protein serine/threonine kinase activity
SNP Position Effect Amino acid change
A/G 25289213 missense_variant p.Ile12Val
C/T 25289287 synonymous_variant p.Thr36Thr
C/A 25289312 synonymous_variant p.Arg45Arg
T/C 25289326 synonymous_variant p.Val49Val
G/T 25289374 synonymous_variant p.Gly65Gly
T/A 25289421 missense_variant p.Val81Glu
A/G 25289455 synonymous_variant p.Gln92Gln
C/T 25289479 synonymous_variant p.Ile100Ile
G/C 25289521 missense_variant p.Glu114Asp
A/G 25289534 missense_variant p.Thr119Ala
T/C 25289560 synonymous_variant p.Thr127Thr
C/G 25289598 missense_variant p.Pro140Arg
A/G 25289602 synonymous_variant p.Leu141Leu
T/C 25289680 synonymous_variant p.Ser167Ser
G/A 25289695 synonymous_variant p.Leu172Leu
G/A 25289758 synonymous_variant p.Gln193Gln
A/T 25289768 missense_variant p.Thr197Ser
G/T 25289809 synonymous_variant p.Leu210Leu
A/G 25289832 missense_variant p.Lys218Arg
T/C 25290082 synonymous_variant p.Asp301Asp
C/T 25290178 synonymous_variant p.Tyr333Tyr
C/T 25290382 synonymous_variant p.Ala401Ala
A/T 25290507 missense_variant p.Gln443Leu
T/C 25290514 synonymous_variant p.Asn445Asn
T/C 25290610 synonymous_variant p.Asp477Asp
G/T 25290697 synonymous_variant p.Thr506Thr
T/G 25290752 missense_variant p.Ser525Ala
C/T 25290850 synonymous_variant p.Ala557Ala
C/T 25290877 synonymous_variant p.Asp566Asp
C/G 25291003 synonymous_variant p.Ser608Ser
A/G 25291009 synonymous_variant p.Ser610Ser
A/T 25291025 missense_variant p.Thr616Ser
T/G,C 25291061 3_prime_UTR_variant
C/G 25291229 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_02059.1
MDKQVVLLSLLIFFFTVSISGVSSTTCPMDLSYVETFPWDASSCRDPVVDKEHCCQALLSVIGMGLAEHLKNTSYFQLPDVNTSSICLSDFQTKVSALSINSSLVPYCFPRASEFVTNTSTCAGIITVDDWKSKVGMISPLDTSCNGDMSDQTRCSLCTDAGLKVTSHLNSLDPNGTKCFYFTVLYASAIVNQYGPTNLGTAGCILGLPLSVKGSSNKKQELKLVFGLVGAVTGVVLGFVLILVYRKWDKRRKEDKYHRSVENGVRNSVLPNTGAKWFRISELERATGKFSQRNMVGQGGDGVVYKGTLSDGTVVAVKEIFDLETKGDEDFCYEVEIISKIKHRNLLPLRGCCISSDNLKGKRRFLVYDFMPNGSLSYQLSVSGANRLTWPQRKNIILDVAKGLAYLHYEIKPPIYHRDIKATNILLDSKMKAKVSDFGLAKQGNDGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILEIMSGRKVLDTMNSSVVLITDWAWTLAKSGNMEDIFDQSIKEEGPEKIMERFVLVGILCAHAMVALRPTIAEALKMLEGDIDIPQLPDRPVPLGQEAFHSSLQHGLQTSVGSSSYFSSYLASYSSSTRTT*


CDS Sequence:
>Vu_02059.1
ATGGATAAGCAAGTGGTTCTTCTTTCTCTCCTTATTTTCTTCTTCACTGTTTCCATATCTGGTGTTTCATCCACCACATGCCCCATGGATCTCAGCTACGTTGAGACCTTTCCCTGGGATGCTTCATCTTGCCGAGACCCTGTTGTTGATAAGGAGCACTGTTGTCAAGCTTTGCTCAGTGTAATTGGCATGGGGTTGGCCGAACACCTCAAAAACACTTCCTACTTTCAACTTCCTGATGTAAACACTTCCTCCATCTGCTTGTCAGATTTCCAAACCAAAGTCTCAGCCTTGTCAATCAACTCCTCTTTGGTCCCTTATTGTTTTCCTAGAGCTTCTGAGTTTGTTACCAACACTTCCACTTGTGCAGGAATCATAACTGTAGATGATTGGAAGAGTAAAGTGGGTATGATTAGCCCCTTAGACACTTCTTGCAATGGGGACATGAGTGATCAAACCCGTTGCAGCCTTTGTACTGATGCTGGTCTCAAAGTGACTTCTCACCTCAATAGTTTGGACCCAAATGGCACAAAGTGCTTTTACTTCACAGTTTTGTATGCCTCGGCTATTGTTAATCAGTATGGTCCTACAAATTTGGGCACCGCTGGTTGCATACTGGGCTTGCCGCTGTCTGTGAAAGGTTCATCGAATAAAAAACAAGAGCTGAAACTTGTTTTTGGGTTGGTGGGTGCTGTTACTGGTGTTGTGCTTGGTTTTGTGTTGATTTTGGTGTACAGAAAGTGGGATAAGAGAAGGAAGGAAGATAAGTATCACAGGTCGGTTGAAAACGGTGTGAGGAACAGTGTTTTGCCTAATACTGGTGCGAAATGGTTTCGCATATCGGAGCTTGAGCGAGCCACTGGTAAATTTTCTCAGAGGAATATGGTTGGCCAAGGTGGTGATGGGGTTGTGTACAAAGGGACTCTTTCAGATGGCACTGTGGTTGCGGTAAAGGAAATTTTTGATTTGGAGACAAAAGGGGATGAAGATTTCTGCTACGAAGTGGAGATCATAAGCAAAATAAAGCACAGGAATCTTCTTCCTCTTCGGGGCTGTTGCATTTCAAGTGATAATTTGAAAGGCAAGAGAAGGTTTCTGGTTTATGATTTCATGCCAAATGGCAGCCTCAGTTACCAGTTATCAGTTTCTGGTGCTAATAGGCTAACATGGCCACAAAGGAAGAACATAATCCTTGATGTGGCCAAGGGGCTTGCTTATTTGCATTATGAGATCAAACCCCCAATTTATCACCGTGACATAAAGGCTACCAACATACTTTTGGATTCAAAAATGAAAGCAAAAGTGTCAGATTTTGGGTTGGCGAAGCAAGGGAATGATGGCCAGTCTCATCTCACAACAAGAGTTGCTGGCACATACGGTTATTTGGCACCAGAGTATGCTCTTTATGGGCAACTGACAGAGAAGAGTGATGTGTACAGTTTTGGCATTGTGATTCTTGAGATCATGAGTGGAAGAAAAGTGCTTGATACCATGAATTCATCGGTTGTTTTGATCACGGATTGGGCATGGACACTGGCAAAATCAGGGAACATGGAAGACATTTTTGACCAGTCAATAAAGGAAGAGGGACCAGAGAAGATCATGGAAAGGTTTGTTCTTGTGGGAATACTCTGTGCTCATGCGATGGTGGCTTTAAGACCTACCATTGCCGAGGCCCTTAAGATGTTAGAGGGTGACATTGACATACCCCAGTTACCTGACAGACCAGTGCCACTGGGTCAGGAGGCCTTCCATTCTTCTTTGCAGCATGGTTTGCAAACTAGCGTAGGATCATCCTCCTATTTTTCTTCATATCTTGCATCCTATTCATCAAGCACTAGAACAACATAG


Promoter Sequence:
>Vu_02059::LG1:25287158-25289158(+)
TACCTCGGTTGGAATCGCGACCTAAAGTGTTAGACCTTTTTACCTCGCTTGTATATGCCGCAGTTCTAAAACCGAAGCGTATATTAAAAAACAACCGTTGTCGTTTCCCTTTGCTGCACTATTGGAGTAACGAATATTTTTCAAAAAAGCCTATATAGAGAGGACTACATGAAGAGAAGAAACAAGAAGAATTATTGGTACACACTCTCTTGCTATTATTCTCTCTAAAGCTTACATAGTCTAATGATAGTTCTTTGAAAAAGAAAAAGTTCTTTATAAGTTTTCATAATTTCTTTTTATACATTTCAAATATTCTCTACGAGAGTTACATATTCTATTCTTTTGATCTATAAAACCTTTGTTATTTTCTTTAAGAAGTGAAGTAGAACTCTTGTAAGTTTAACTCAGTAGAGTTAAACCGTCTAGTCAGTTAGACTAGTTCATACTAGGAGTGATTATACTCGTCCTAACTAGTTGAGTTTGTTGTATATTAAGAGTGGTTAAACTTGTTATAATCTTTTGTGATTATTGGAACTCCTTAAGAGTGTTTAAGGAGGAACTGGACGTAATATAAAAATAAGTGTGTTATTACTTTTGTTTTCAAATATTTTCCTTACACGTTTTATACATTCATGTGTGTAATAATTATTGCAGATCGTTTAACCCCTACAAAAGAGATTAAACACTGCTTTGCAAAAAGATTTAAAATTTTATTCAAACTCACTTTTCTAGAGTTTGCATGTGTTACAACTTTATGAGGTTAAGTTACGTTAAAAACCTACTTGTTAACCATTTGTAAAATAAAACATATGAAAATACAAAAGTTGGGAGAAAACAAAATGTAAAACTAACATAATTTTTTTTAGGTTTAAGTCTTACTTAAAAGTCATAGAAAAAAGAAATTAAAAATCTAAAAAAATATATTTATATTAAAACAAGTATTTAAAAACAAGCAATGTATAGAAATAAATAAAGCGTAAAAGCTTATGTTATCAAAAGCAAAGTCTTAAAACTATAATATTATGATAAAATTAATAATCATAAGTAAATTACTAAATAGGACATTTTTATACTCTTTAATTTACTACAAATTTTCTATACTCTCTCAAACTAAGCTATTTTAGAATAATATAAATTCATTAATTAAACTAAAAATATAAATATGTATATGTATATATTTGTCTTATATTATAAATAAATTTTGATAGAATTTGATCACAAAATTTAAAAATAAATAAATATAAATTTTTTAATTTAATTATATTAAATTTGTTTAAATTGTCAACGATTAAATTTAAATTGTTTACATGTTTAATAAATTTTCATTCAAATATCAACCTAAAAATATATCTAAATTATTTGAAGTAGAAACAAATACCTATTTCATATCCAAATTTCATATTTAGATACTAAAATCATATTTAATAATTTCTTTTTAAAGATTGGATTAATATAATATTAGAAGTTTTAAATTCCCTAACTCAAGTACAAAACTTGTCAACATATAAGCTCAACGACATTGGAACCACCGAGTGAACTTTGTTGACAAGTTTATTAAATAGAGCTATAATTTTATTTTTATTTAACATCGTAAAATATTATAATTAATATTAAAAGAATACTAATAATAGGTATTAGTCCCTTCATGATGAACCATTATTACCTGGCGCGCTTTTAAAAACGCTCGCTTATTGAGACTTGGGACTAAGGAAACACGAAAGAGACCGCAAATGTCTTTGTCCAGAAACCAAAACCAAAAACATAAATTCAAAATAGTAGCAACAATTTGACCTGGGTCAGCATAAAATACACCGAACCCTCTTGTTACTTAACTTTGAAAACGACATCAAAATCAAATTTTTAATTCAGTTTTACTGTGCATTCTATTCTAAACGTGGCTTTTGATCACAGCAAGCCAGGTTTGACTGGTAAAACTTGCAGTTATCCATCCGATAGTGGTTGTATTATAAAAGACTAATGGTCACAAAATCAAGGTTTCA


Gene Sequence:
>Vu_02059(+)
AAGGTTTTGCCTGCCCCAGAAAATGGATAAGCAAGTGGTTCTTCTTTCTCTCCTTATTTTCTTCTTCACTGTTTCCATATCTGGTGTTTCATCCACCACATGCCCCATGGATCTCAGCTACGTTGAGACCTTTCCCTGGGATGCTTCATCTTGCCGAGACCCTGTTGTTGATAAGGAGCACTGTTGTCAAGCTTTGCTCAGTGTAATTGGCATGGGGTTGGCCGAACACCTCAAAAACACTTCCTACTTTCAACTTCCTGATGTAAACACTTCCTCCATCTGCTTGTCAGATTTCCAAACCAAAGTCTCAGCCTTGTCAATCAACTCCTCTTTGGTCCCTTATTGTTTTCCTAGAGCTTCTGAGTTTGTTACCAACACTTCCACTTGTGCAGGAATCATAACTGTAGATGATTGGAAGAGTAAAGTGGGTATGATTAGCCCCTTAGACACTTCTTGCAATGGGGACATGAGTGATCAAACCCGTTGCAGCCTTTGTACTGATGCTGGTCTCAAAGTGACTTCTCACCTCAATAGTTTGGACCCAAATGGCACAAAGTGCTTTTACTTCACAGTTTTGTATGCCTCGGCTATTGTTAATCAGTATGGTCCTACAAATTTGGGCACCGCTGGTTGCATACTGGGCTTGCCGCTGTCTGTGAAAGGTTCATCGAATAAAAAACAAGAGCTGAAACTTGTTTTTGGGTTGGTGGGTGCTGTTACTGGTGTTGTGCTTGGTTTTGTGTTGATTTTGGTGTACAGAAAGTGGGATAAGAGAAGGAAGGAAGATAAGTATCACAGGTCGGTTGAAAACGGTGTGAGGAACAGTGTTTTGCCTAATACTGGTGCGAAATGGTTTCGCATATCGGAGCTTGAGCGAGCCACTGGTAAATTTTCTCAGAGGAATATGGTTGGCCAAGGTGGTGATGGGGTTGTGTACAAAGGGACTCTTTCAGATGGCACTGTGGTTGCGGTAAAGGAAATTTTTGATTTGGAGACAAAAGGGGATGAAGATTTCTGCTACGAAGTGGAGATCATAAGCAAAATAAAGCACAGGAATCTTCTTCCTCTTCGGGGCTGTTGCATTTCAAGTGATAATTTGAAAGGCAAGAGAAGGTTTCTGGTTTATGATTTCATGCCAAATGGCAGCCTCAGTTACCAGTTATCAGTTTCTGGTGCTAATAGGCTAACATGGCCACAAAGGAAGAACATAATCCTTGATGTGGCCAAGGGGCTTGCTTATTTGCATTATGAGATCAAACCCCCAATTTATCACCGTGACATAAAGGCTACCAACATACTTTTGGATTCAAAAATGAAAGCAAAAGTGTCAGATTTTGGGTTGGCGAAGCAAGGGAATGATGGCCAGTCTCATCTCACAACAAGAGTTGCTGGCACATACGGTTATTTGGCACCAGAGTATGCTCTTTATGGGCAACTGACAGAGAAGAGTGATGTGTACAGTTTTGGCATTGTGATTCTTGAGATCATGAGTGGAAGAAAAGTGCTTGATACCATGAATTCATCGGTTGTTTTGATCACGGATTGGGCATGGACACTGGCAAAATCAGGGAACATGGAAGACATTTTTGACCAGTCAATAAAGGAAGAGGGACCAGAGAAGATCATGGAAAGGTTTGTTCTTGTGGGAATACTCTGTGCTCATGCGATGGTGGCTTTAAGACCTACCATTGCCGAGGCCCTTAAGATGTTAGAGGGTGACATTGACATACCCCAGTTACCTGACAGACCAGTGCCACTGGGTCAGGAGGCCTTCCATTCTTCTTTGCAGCATGGTTTGCAAACTAGCGTAGGATCATCCTCCTATTTTTCTTCATATCTTGCATCCTATTCATCAAGCACTAGAACAACATAGATTGCAAAGTCTACAGTAGTTTGCTTGTGCTGAAGAAACTAATCACTATTAGGTCTTAGTCAGCAATTCACGCCCACCATTTCCCATTTGGAACCTTCAATTTGACCTTCAAAATCGTGCCGTAAATATCTTGGATTCTTTTTCATTTTGTATACTTGTAATTTGATTATTTTTTATTCAGATTAAATTTGCGTTTTTCATATC