Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_02050 LG1 25144796 25146801 hypothetical protein
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   cellular response to oxygen-containing compound, defense response to other organism, cellular response to organic cyclic compound, protein phosphorylation, defense response to other organism, regulation of defense response, protein phosphorylation, defense response to other organism, cellular response to oxygen-containing compound, response to inorganic substance, response to organonitrogen compound, shoot system development, response to oxidative stress, response to alcohol, response to wounding, response to lipid, cellular response to organic cyclic compound, signal transduction, shoot system development, protein phosphorylation
Cellular Component   located in   extracellular region
Molecular Function   enables   protein serine/threonine kinase activity, protein serine/threonine kinase activity, polysaccharide binding, protein serine/threonine kinase activity
SNP Position Effect Amino acid change
A/G 25144805 stop_lost p.Ter476Argext*?
A/G 25144809 synonymous_variant p.Ser474Ser
C/T 25144845 synonymous_variant p.Gly462Gly
A/C 25144851 missense_variant p.Ser460Arg
G/A 25144859 missense_variant p.His458Tyr
C/T 25144868 missense_variant p.Gly455Ser
T/A 25144962 synonymous_variant p.Ala423Ala
G/A 25145375 intron_variant
G/A 25145489 splice_region_variant&intron_variant
G/A 25145504 missense_variant p.Leu375Phe
A/G 25145555 missense_variant p.Phe358Leu
A/G 25145791 missense_variant p.Phe279Ser
C/T 25145809 missense_variant p.Ser273Asn
G/C 25145812 stop_gained p.Ser272*
C/T 25145844 synonymous_variant p.Glu261Glu
A/G 25145875 missense_variant p.Phe251Ser
G/A 25145904 intron_variant
A/G 25145973 intron_variant
A/G 25146003 intron_variant
T/A 25146009 intron_variant
T/A 25146019 intron_variant
A/G 25146028 intron_variant
T/A 25146031 intron_variant
C/T 25146033 intron_variant
T/A 25146066 missense_variant p.Thr246Ser
G/T 25146080 missense_variant p.Ser241Tyr
G/A 25146087 missense_variant p.Pro239Ser
A/G 25146118 synonymous_variant p.Cys228Cys
T/C 25146140 missense_variant p.Asp221Gly
C/A 25146141 missense_variant p.Asp221Tyr
A/G 25146160 synonymous_variant p.Cys214Cys
G/C 25146169 synonymous_variant p.Gly211Gly
A/T,G 25146187 synonymous_variant p.Ser205Ser
A/C 25146189 missense_variant p.Ser205Ala
A/G 25146198 missense_variant p.Ser202Pro
T/G 25146208 missense_variant p.Arg198Ser
C/T 25146209 missense_variant p.Arg198Lys
A/G,C 25146216 missense_variant p.Tyr196Asp
G/A,T 25146221 missense_variant p.Pro194Leu
G/A 25146222 missense_variant p.Pro194Ser
A/G 25146225 missense_variant p.Tyr193His
T/C 25146228 missense_variant p.Arg192Gly
A/C 25146231 missense_variant p.Tyr191Asp
T/C,G 25146234 missense_variant p.Thr190Ala
A/G 25146236 missense_variant p.Phe189Ser
A/G 25146237 missense_variant p.Phe189Leu
C/G 25146239 missense_variant p.Arg188Pro
G/C 25146240 missense_variant p.Arg188Gly
C/T,G 25146291 missense_variant p.Glu171Gln
G/A 25146294 missense_variant p.Leu170Phe
G/T 25146301 missense_variant p.Asp167Glu
T/A 25146302 missense_variant p.Asp167Val
T/A 25146304 missense_variant p.Leu166Phe
G/T 25146314 missense_variant p.Ser163Tyr
C/T 25146325 synonymous_variant p.Pro159Pro
C/A,* 25146336 missense_variant p.Val156Phe
C/*,G 25146337 missense_variant p.Leu155Phe
G/C,* 25146346 synonymous_variant p.Ser152Ser
G/A,* 25146347 missense_variant p.Ser152Phe
T/G,* 25146356 missense_variant p.Glu149Ala
G/T,* 25146360 synonymous_variant p.Arg148Arg
A/T,* 25146363 missense_variant p.Tyr147Asn
C/A,* 25146365 missense_variant p.Arg146Leu
T/G,* 25146370 missense_variant p.Gln144His
T/A,* 25146371 missense_variant p.Gln144Leu
G/A,* 25146372 stop_gained p.Gln144*
C/T,* 25146379 synonymous_variant p.Gly141Gly
C/T 25146380 missense_variant p.Gly141Glu
G/A 25146388 synonymous_variant p.Thr138Thr
C/G,* 25146404 missense_variant p.Ser133Thr
C/G,* 25146406 missense_variant p.Leu132Phe
T/G 25146413 missense_variant p.His130Pro
G/A 25146414 missense_variant p.His130Tyr
G/A 25146416 missense_variant p.Pro129Leu
A/G,* 25146421 synonymous_variant p.Tyr127Tyr
T/A 25146422 missense_variant p.Tyr127Phe
A/C,G 25146423 missense_variant p.Tyr127Asp
A/T 25146426 missense_variant p.Tyr126Asn
T/A 25146427 synonymous_variant p.Leu125Leu
A/T,G 25146428 missense_variant p.Leu125Pro
G/C 25146429 missense_variant p.Leu125Val
A/C 25146432 missense_variant p.Ser124Ala
A/G,* 25146437 missense_variant p.Phe122Ser
T/C 25146447 missense_variant p.Ser119Gly
C/A 25146453 missense_variant p.Val117Phe
A/T 25146457 missense_variant p.Asn115Lys
T/C 25146462 missense_variant p.Ile114Val
G/T 25146463 synonymous_variant p.Ile113Ile
A/G 25146470 missense_variant p.Met111Thr
A/G,* 25146472 synonymous_variant p.Phe110Phe
G/A 25146482 missense_variant p.Ser107Phe
T/G 25146491 missense_variant p.Asn104Thr
C/T 25146496 synonymous_variant p.Pro102Pro
G/C 25146497 missense_variant p.Pro102Arg
G/A 25146499 synonymous_variant p.Asp101Asp
A/C 25146507 missense_variant p.Leu99Val
T/G,A 25146508 missense_variant p.Leu98Phe
A/G 25146509 missense_variant p.Leu98Ser
T/C 25146515 missense_variant p.Glu96Gly
C/T 25146516 missense_variant p.Glu96Lys
G/T 25146519 missense_variant p.Gln95Lys
A/T 25146520 stop_gained p.Tyr94*
A/C 25146522 missense_variant p.Tyr94Asp
C/T 25146525 missense_variant p.Glu93Lys
G/C 25146529 missense_variant p.Asn91Lys
T/A 25146530 missense_variant p.Asn91Ile
T/A,C 25146531 missense_variant p.Asn91Tyr
G/T 25146535 stop_gained p.Tyr89*
A/T 25146537 missense_variant p.Tyr89Asn
C/T 25146540 missense_variant p.Asp88Asn
A/C 25146554 missense_variant p.Ile83Ser
T/C 25146555 missense_variant p.Ile83Val
T/A 25146559 synonymous_variant p.Pro81Pro
A/G 25146562 synonymous_variant p.Leu80Leu
G/C,T 25146579 missense_variant p.Gln75Glu
G/T 25146582 missense_variant p.His74Asn
A/G 25146601 synonymous_variant p.Cys67Cys
T/C 25146630 missense_variant p.Lys58Glu
G/A 25146632 missense_variant p.Thr57Met
T/A 25146633 missense_variant p.Thr57Ser
A/C 25146637 missense_variant p.Asn55Lys
G/T 25146643 synonymous_variant p.Leu53Leu
C/T 25146676 synonymous_variant p.Pro42Pro
C/G 25146702 missense_variant p.Asp34His
G/C 25146706 missense_variant p.His32Gln
G/C,T 25146708 missense_variant p.His32Asp
T/C 25146729 missense_variant p.Arg25Gly
T/C 25146742 missense_variant p.Ile20Met
C/T 25146748 synonymous_variant p.Ser18Ser
A/G 25146761 missense_variant p.Leu14Ser
G/C 25146765 missense_variant p.Leu13Val
G/C 25146771 missense_variant p.His11Asp
A/G 25146779 missense_variant p.Leu8Pro
C/T 25146796 missense_variant p.Met2Ile

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_02050.1
MMASVLLLQRHSLLMKLSLILILIRSGSAHNHCDGENLSCGPNQPLIRFPFQLVNETKEPCSYPRLCLSCTEKHQTMLLLPTIKLQVDYINYEYQEILLTDPENCFSNKFMQIINFVQSYQFESLYYEPHNLSFFNCTSAGHRQLRYRESYSQDLVSCPIFISDSLDSVLELDLTSCTKMFDIPSPIRFTYRYPLYWRWFKSNCSECEAKGKRCKWKTNNDTEGDIECFECTRKRIHVPKSLIFATTGSIFLGLVVTAVFKSIVYFREKQEDQARVDKFLEDYRAEKPARFTYADLKRITNGFKEMLGEGAHGAVFRGKLSSEIPVAVKILNNTEGEGNEFINEVGIMGKIHHINVVRLLGFCAEGLHRALVYNFFPNEDFHVLYPDWIHNLVDGDVHIHVEDEDDFKIAKKLAIIGLWCIQWQPGNRPSIKSVINMLETQEENQIAVPPNPFHSATSTTVKGPISTRRPLHLEVIEE*


CDS Sequence:
>Vu_02050.1
ATGATGGCAAGTGTGTTGCTCCTCCAACGTCATTCTCTATTGATGAAGTTATCGCTAATACTTATTCTTATCAGAAGTGGCAGCGCTCATAACCACTGCGATGGAGAAAACTTGTCTTGTGGGCCGAACCAACCCCTTATCAGATTTCCCTTCCAACTCGTGAATGAGACGAAGGAGCCATGCAGTTATCCCCGTCTTTGTCTTTCTTGTACTGAAAAACATCAGACCATGCTTCTGCTTCCAACGATCAAACTCCAAGTCGATTACATAAACTACGAATATCAGGAAATTTTATTAACTGACCCGGAAAACTGCTTTTCCAACAAGTTTATGCAAATCATCAATTTTGTTCAGAGTTACCAATTTGAATCACTATATTATGAACCACACAACTTGAGCTTCTTCAACTGTACCTCAGCTGGGCATCGACAACTCCGCTACCGGGAATCATATTCCCAAGATTTGGTCTCCTGTCCGATTTTCATTTCTGATTCTTTAGACAGTGTCCTCGAATTAGATCTAACATCCTGTACCAAGATGTTCGACATCCCTTCGCCAATCCGTTTCACCTACAGGTATCCCTTGTATTGGAGATGGTTCAAATCAAATTGTTCTGAGTGCGAAGCTAAAGGCAAGAGATGTAAATGGAAGACCAACAACGACACAGAAGGAGACATCGAATGTTTTGAATGCACACGAAAAAGAATTCACGTTCCTAAATCTCTTATTTTTGCTACTACAGGTTCGATCTTTTTGGGGCTGGTGGTCACTGCTGTCTTTAAGAGCATTGTCTATTTTAGGGAAAAACAAGAAGATCAAGCAAGAGTGGACAAGTTTTTAGAGGACTACAGGGCAGAAAAGCCTGCAAGATTCACCTACGCTGACCTTAAAAGAATCACCAATGGCTTTAAGGAAATGTTAGGAGAAGGAGCTCATGGGGCTGTGTTCAGAGGAAAACTTTCCAGTGAGATACCCGTGGCTGTGAAGATCCTCAACAATACAGAGGGAGAAGGGAACGAGTTCATCAATGAAGTGGGAATTATGGGCAAAATCCATCACATCAACGTGGTGCGTTTGCTTGGCTTCTGTGCAGAAGGACTCCATCGTGCTCTTGTCTACAATTTCTTTCCAAACGAAGATTTCCATGTTCTGTACCCTGATTGGATCCATAACCTGGTTGATGGAGATGTGCATATCCATGTTGAGGATGAAGATGATTTTAAGATTGCAAAGAAACTGGCAATTATTGGGCTTTGGTGCATTCAGTGGCAGCCAGGGAACCGTCCATCCATAAAATCTGTGATAAACATGCTAGAAACTCAAGAGGAAAACCAGATTGCCGTGCCTCCTAATCCCTTTCACTCGGCAACTTCCACTACAGTTAAGGGACCCATTTCGACAAGACGACCTTTGCATTTGGAAGTGATTGAAGAATGA


Promoter Sequence:
>Vu_02050::LG1:25146801-25148801(-)
CCTCAACATCAACATATACACATACCATGGCATTACAGAATCTCTCTGCGAGACTCATACCATGCTCACATTCCTCAACTCATATTATACCATTACGAGATCTCCCCATAATACTCATATTATGTTCAGATGCATAAATTCAAATCCAATATAATAATTTACAATCATCACAGAAATCATACAAATTGAATATATCACAAAATAAATTAACAATACTGAAATATCACCATAAATGGTTACTAGAGAAGAATCAAATGTTTGACGAATCAAACTCACCATAAACGTCAGTACATATGACTAGTCACAACTTACTGGATTGGACCAGGGCTGCTCTATGATCAGGGATGAACCAACTCCGGTTTTTAAGATTCCTCTATCCTACCATCACAATTATAATTCATAATTCCATATCTACCATAATAACATGAATCCATCAGACATTTTCATTCCAACGAGATATATTGCATAATAATTTAACAGTACTCAATCTGTACAACAAGATTTCAGTTAAAAACATATCGAGTAGACTTCTAGGAAAGAGAGGTGTGTCACAATGGACAACTTAAGTACCAAGTCTTTCCTTAGCCAAAGTGTTCCTCAACTAGTTTTTAACAAATTTCTTATTTACAGATTCAAAACAATAACATATAATATTAACCCCGAAATTCAATATAGATAGATATACATTAAGCATTAACAATATTCATACAGAATTTCAAGACATGAATAGTAATAAAACAATACTAAATCATAATATAAAAGCTTACAAAGGTTAGCTCCCCTACCTCTATTCCAAACTTCTCTTGCTCCGAATTTGTTTTCCCGAAAAACCCTCCAGAGTCTCTACTCTTCTTGCAACTAAAAATTTCTTCCTAACTCTTTCTTCTCTATTTCTCAAGGTTTCTCACTTGATTCTTGCTCTCTTTGTGCAAAATAGCCTCCCCTCTCATGGCTATTTATAGTCTAAAAATTTTACTATTCATCAGATTTTTAATATTATTTATTATTTTAATATTATTTTATTATATTAATATCTTAATCACCACTTACATAATGGATTTCTCAATAATGCCTTCAAATCTGAATGCTTTCTCCATTATCAATATTTTAAATTTTATTTTACTTTTTTGTTTTTTTAATGTTTTTTTAATTTTTTTTAGACAAAAAGGTAGAAAAGAGTTTGAACCCATTACAAAAATTTTCTAGCAGTTAAGCTACAAAAATTTCTTATTTAACTTTCCACATTTTATAAACTTATTATATTTTCTATTCAAAAAAAATTTATTACTACTAGTAATAAAATTGTTACTATTAAGATAAATATTTTTCATTGTCTTACGAGACTTTCTACCTTTATTACTTTCCTTTATTATGTCTTGTATTTAAACTTCTTACCTTTTCCACAAATAATATTTTATAACTATATAATATATACGAATTTAAAATTTTGATTAAAAATTATTAAAATTCATATTTTATAAATCCTCAGTAAGCACAATATTAGTCATCAATTAAAGATTTGCCAGAGAGAAAAGAAATTTAAAAATGGAGGGGAAATTTTTTTAATTTAGACAACAAACATAAAAGATCAAATTTAAATTAAGAGATTATAACAATATTTAACCATGAAAAATGTATAATAGGTAATATGATAGTTATGTAGAATCAAAATTAGTTTTGAATGTTGATATTTAAAAGCAAATTTAACCTGGTTTATTACTTGTGGGGGAAGAGATAAGGCCTATTTTGCAAAAACTATCATATAAGTTTTTTTTTTGTTAGAGTCAAATTGTACTAACTCATAAGTTAAATATATGCTAATATATTTATGAGTCGCACCTAATTAAGGGACTTTATTTTTCCTTTAAAAAAACTGTTTAAAAGCGCAGACTTTGACTCGTGAGAAATCAGTCGTTTTTATCTTTTCTATGTGGTTTCTGCAACTGATTATGAAGAGGCACTCGGCTTGGTTTGTTAAAAGTAACAGGGAAGAATTAAAC


Gene Sequence:
>Vu_02050(-)
ATGATGGCAAGTGTGTTGCTCCTCCAACGTCATTCTCTATTGATGAAGTTATCGCTAATACTTATTCTTATCAGAAGTGGCAGCGCTCATAACCACTGCGATGGAGAAAACTTGTCTTGTGGGCCGAACCAACCCCTTATCAGATTTCCCTTCCAACTCGTGAATGAGACGAAGGAGCCATGCAGTTATCCCCGTCTTTGTCTTTCTTGTACTGAAAAACATCAGACCATGCTTCTGCTTCCAACGATCAAACTCCAAGTCGATTACATAAACTACGAATATCAGGAAATTTTATTAACTGACCCGGAAAACTGCTTTTCCAACAAGTTTATGCAAATCATCAATTTTGTTCAGAGTTACCAATTTGAATCACTATATTATGAACCACACAACTTGAGCTTCTTCAACTGTACCTCAGCTGGGCATCGACAACTCCGCTACCGGGAATCATATTCCCAAGATTTGGTCTCCTGTCCGATTTTCATTTCTGATTCTTTAGACAGTGTCCTCGAATTAGATCTAACATCCTGTACCAAGATGTTCGACATCCCTTCGCCAATCCGTTTCACCTACAGGTATCCCTTGTATTGGAGATGGTTCAAATCAAATTGTTCTGAGTGCGAAGCTAAAGGCAAGAGATGTAAATGGAAGACCAACAACGACACAGAAGGAGACATCGAATGTTTTGAATGCACACGAAAAAGAATTCACGTTCCTAAATCTCTTATTTTTGCTACTACAGGTCATATCAGAGACTCTTACACTTTCGCATTTTAATATTGATTTGTTCCTATTTCCTAGAAATTTGAATGCCAACAAGTGAATGGCTTTACAAAGATTTGAAACAAAGACTAAAATAAATAAATAAAGCTTTCTCTTTTCTTTTCTAAATGAAGTCTCCAACCGCTATTGTAGGTTCGATCTTTTTGGGGCTGGTGGTCACTGCTGTCTTTAAGAGCATTGTCTATTTTAGGGAAAAACAAGAAGATCAAGCAAGAGTGGACAAGTTTTTAGAGGACTACAGGGCAGAAAAGCCTGCAAGATTCACCTACGCTGACCTTAAAAGAATCACCAATGGCTTTAAGGAAATGTTAGGAGAAGGAGCTCATGGGGCTGTGTTCAGAGGAAAACTTTCCAGTGAGATACCCGTGGCTGTGAAGATCCTCAACAATACAGAGGGAGAAGGGAACGAGTTCATCAATGAAGTGGGAATTATGGGCAAAATCCATCACATCAACGTGGTGCGTTTGCTTGGCTTCTGTGCAGAAGGACTCCATCGTGCTCTTGTCTACAATTTCTTTCCAAACGGTTCCTTACAAAGCTTCATTTTTCCTCCAGAAGACAAGGACCGTTTCCTTGGCTGGGAGAAGCTTCAACACATTGCTCTTGGTATAGCTAAAGGGATTGAGTATCTTCATCAAGGTTGCAATCATCCCATTATTCACTTTGACATCAATCCTCACAACGTGTTACTTGATGACAACTTCACTCCAAAAATATCTGATTTTGGCTTGGCCAAATTGTGTTCCAAGAATCCCAGTTTGGTGTCCATGACAGCTGCTAGGGGAACCTTGGGATACATTGCACCTGAAGTCTTCTCTAGAAACTTTGGAAACGTGTCTTACAAGTCTGATATTTACAGTTATGGAATGTTGTTGTTAGAAATGGTTGGTGGGAGGAAGAATGTGGACATGTCTTCTCCAGAAGATTTCCATGTTCTGTACCCTGATTGGATCCATAACCTGGTTGATGGAGATGTGCATATCCATGTTGAGGATGAAGATGATTTTAAGATTGCAAAGAAACTGGCAATTATTGGGCTTTGGTGCATTCAGTGGCAGCCAGGGAACCGTCCATCCATAAAATCTGTGATAAACATGCTAGAAACTCAAGAGGAAAACCAGATTGCCGTGCCTCCTAATCCCTTTCACTCGGCAACTTCCACTACAGTTAAGGGACCCATTTCGACAAGACGACCTTTGCATTTGGAAGTGATTGAAGAATGA