Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_02027 LG1 24842003 24845025 hypothetical protein
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/T 24842054 missense_variant p.Val18Leu
C/T 24842063 synonymous_variant p.Leu21Leu
C/G 24842086 missense_variant p.Ser28Arg
C/T 24842093 synonymous_variant p.Leu31Leu
A/C 24842101 synonymous_variant p.Gly33Gly
T/G 24842378 missense_variant p.Ser126Ala
A/G 24842456 missense_variant p.Thr152Ala
C/A 24842457 missense_variant p.Thr152Lys
A/T 24842460 missense_variant p.Glu153Val
G/A 24842485 synonymous_variant p.Arg161Arg
C/G,* 24842536 synonymous_variant p.Thr178Thr
A/T 24842540 missense_variant p.Ile180Leu
G/A 24842544 missense_variant p.Gly181Glu
A/G 24842621 missense_variant p.Thr207Ala
C/T 24842622 missense_variant p.Thr207Ile
G/A 24842739 missense_variant p.Ser246Asn
C/T 24842758 synonymous_variant p.Cys252Cys
C/A 24842767 synonymous_variant p.Ser255Ser
A/G 24842768 missense_variant p.Met256Val
C/A 24842771 missense_variant p.Leu257Ile
T/A 24842772 missense_variant p.Leu257His
C/A 24842773 synonymous_variant p.Leu257Leu
C/A 24842829 missense_variant p.Ala276Glu
A/G 24842854 synonymous_variant p.Lys284Lys
C/A 24842856 missense_variant p.Pro285Gln
C/A 24842927 upstream_gene_variant
A/T 24842932 upstream_gene_variant
A/G 24842937 upstream_gene_variant
T/C,* 24843026 upstream_gene_variant
C/T,G 24843048 upstream_gene_variant
G/A 24843078 upstream_gene_variant
G/A 24843130 upstream_gene_variant
T/C 24843134 upstream_gene_variant
G/C 24843147 upstream_gene_variant
T/C 24843203 upstream_gene_variant
A/T 24843205 upstream_gene_variant
T/A 24843234 upstream_gene_variant
A/T 24843286 upstream_gene_variant
G/C 24843309 upstream_gene_variant
T/C 24843325 upstream_gene_variant
T/A 24843329 upstream_gene_variant
T/C 24843336 upstream_gene_variant
C/T 24843396 synonymous_variant p.Ser300Ser
A/G 24843444 synonymous_variant p.Ser316Ser
A/C 24843449 missense_variant p.Asn318Thr
C/T 24843450 synonymous_variant p.Asn318Asn
G/C 24843464 stop_lost p.Ter323Serext*?
A/T,G 24843480 stop_lost p.Ter328Trpext*?
A/C 24843488 missense_variant p.Tyr331Ser
G/A 24843499 missense_variant p.Asp335Asn
T/C 24843511 missense_variant p.Trp339Arg
G/T 24843515 missense_variant p.Arg340Met
A/C 24843523 missense_variant p.Lys343Gln
A/C 24843524 missense_variant p.Lys343Thr
A/C 24843525 missense_variant p.Lys343Asn
G/T 24843528 missense_variant p.Lys344Asn
C/T 24843534 synonymous_variant p.Ala346Ala
T/C 24843549 synonymous_variant p.Tyr351Tyr
T/C 24843601 upstream_gene_variant
T/G 24843640 upstream_gene_variant
A/C 24843663 upstream_gene_variant
A/G 24843676 upstream_gene_variant
C/T 24843677 upstream_gene_variant
A/C 24843680 upstream_gene_variant
A/G,* 24843763 upstream_gene_variant
A/T 24843769 upstream_gene_variant
C/G,* 24843802 upstream_gene_variant
G/C 24843839 upstream_gene_variant
T/C 24843867 upstream_gene_variant
A/T 24843884 upstream_gene_variant
T/G 24843891 upstream_gene_variant
T/C 24843928 missense_variant p.Val365Ala
G/T 24843957 missense_variant p.Val375Phe
G/A 24843990 missense_variant p.Glu386Lys
A/G 24844053 missense_variant p.Ile407Val
G/C 24844076 missense_variant p.Gln414His
G/A 24844123 missense_variant p.Ser430Asn
T/A 24844128 missense_variant p.Trp432Arg
T/A 24844188 missense_variant p.Tyr452Asn
A/T 24844202 missense_variant p.Gln456His
A/C 24844213 stop_lost p.Ter460Serext*?
C/T 24844263 stop_gained p.Gln477*
C/T 24844347 missense_variant p.His505Tyr
A/T 24844355 missense_variant p.Leu507Phe
C/G 24844371 missense_variant p.Pro513Ala
C/A 24844386 missense_variant p.Gln518Lys
A/G 24844395 missense_variant p.Met521Val
A/G 24844413 missense_variant p.Asn527Asp
G/A 24844733 synonymous_variant p.Arg633Arg
C/A 24844738 missense_variant p.Thr635Lys
C/A 24844767 missense_variant p.Leu645Ile
C/G 24844783 missense_variant p.Ser650Cys
A/C,G 24844795 missense_variant p.Tyr654Ser
G/A 24844803 missense_variant p.Gly657Arg
C/G,A 24844807 missense_variant p.Thr658Asn
A/G 24844837 missense_variant p.Tyr668Cys
C/T 24844860 stop_gained p.Gln676*
T/C 24844867 missense_variant p.Leu678Pro
T/A 24844877 stop_gained p.Tyr681*
G/A 24844936 missense_variant p.Cys701Tyr
A/G 24844960 missense_variant p.Tyr709Cys
T/A,C 24844971 missense_variant p.Phe713Ile
G/A 24845007 missense_variant p.Glu725Lys

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_02027.1
MAGMRLKEMQKQLTRLTVVLLMALEAASQALPGCPYSCGIVSSIPYPFGIGNSNLTGENCFLDKELNLTCTNSTLYRGKGNVQILNITLAGKIDMLTYISEVCKNESLGREETHGYDVSLTTPAFSISSEDNKFVTVGCDTYGYLNSFRNGTESSTGCLTRCDTLESVESMQRSGNCTGIGCCQVDIPPGMKNITFQAFSFNNFNSTSDFNDCGFSFVVKNGNYTFSVDHLNGAPFSMTPIVMDWSVGNDTCEASMLRADYACKSPYSECENSPFAYGYRCKCKPGFQGNAYLLHGCQDIPECSSNKHNCDSEDHCHETPGSFECFCPDGLIGNGTKEGGGCQKRQPADAFMKIVIGAGVGLIALFIGIFWLYLMFQKRKVLKLKQKFFQQNGGIILRQQLSTEEDSSQTTTIFSAEQLKKATNNFDESLVIGKGGYGTVFKGVLSNNKVVAIKKSKIVDKSQVEQFINEVIILSQINHRNVVKLLGCCLETEVPLLVYEFVNNGTLYDYLHNQGQGVNVSWKTRLRIATEAAAALSYLHSAASIPIIHRDVKTANILLDDTYTAKVSDFGASRLVPLDQTEIATIVQGTFGYLDPEYMQSSQLTEKSDVYSFGVVLVELLTGEKPFSFDRAEGKRSLTVHFLCSLKEDRLFDVIQVGLLDEENQQEIMQVAILAARCLRLIGEERPSMKEVTMELEGIKLVKKHPWINTGKNFNESQYLLCETQSSYAW*


CDS Sequence:
>Vu_02027.1
ATGGCAGGAATGAGATTGAAGGAGATGCAGAAGCAACTGACCAGACTGACCGTGGTGTTACTGATGGCCTTAGAAGCCGCCAGCCAAGCCCTGCCCGGATGCCCGTACTCATGCGGAATTGTTTCATCGATTCCGTATCCATTCGGCATCGGCAATTCAAACCTCACCGGTGAAAACTGTTTTCTGGACAAAGAATTGAATCTCACTTGCACAAACTCAACCTTGTATCGCGGTAAAGGTAACGTCCAAATTCTGAACATAACCCTCGCCGGTAAAATCGACATGCTCACCTACATCTCCGAGGTCTGCAAAAACGAATCGTTAGGTAGAGAAGAAACACACGGCTACGATGTCAGTCTCACAACACCGGCTTTTTCCATTTCTAGTGAGGACAACAAGTTCGTGACCGTAGGCTGCGATACCTACGGCTATCTCAACAGTTTCCGGAACGGCACAGAATCTTCAACGGGGTGCTTGACCAGGTGCGACACCTTAGAGAGCGTTGAAAGCATGCAGAGAAGTGGAAACTGCACCGGCATAGGGTGTTGCCAGGTCGACATTCCTCCTGGGATGAAGAACATCACTTTTCAAGCTTTCTCCTTCAACAATTTCAATTCCACTTCCGATTTCAACGACTGTGGCTTCTCCTTCGTCGTCAAAAACGGCAACTACACTTTCTCCGTCGATCATTTAAACGGCGCCCCGTTCAGTATGACACCTATTGTCATGGATTGGAGCGTTGGAAACGACACGTGCGAAGCTTCCATGCTCAGAGCAGATTATGCATGCAAGAGTCCTTATAGCGAGTGTGAGAACTCCCCGTTTGCATATGGTTACCGATGCAAATGTAAACCAGGCTTTCAGGGAAACGCTTACCTTCTCCATGGTTGCCAAGACATTCCTGAGTGTAGTAGTAACAAACACAATTGCGATAGTGAAGATCATTGTCATGAAACTCCGGGTTCTTTTGAATGTTTCTGTCCTGACGGACTTATCGGAAATGGGACAAAAGAAGGTGGAGGATGCCAAAAAAGGCAGCCGGCCGATGCTTTTATGAAGATCGTCATCGGCGCAGGTGTAGGATTAATTGCTCTGTTCATAGGGATTTTTTGGTTGTACTTAATGTTTCAAAAAAGGAAAGTCTTAAAATTAAAGCAGAAGTTTTTTCAGCAGAACGGAGGAATCATTCTAAGACAACAACTCTCCACAGAAGAAGACTCATCTCAGACCACTACAATTTTCAGTGCAGAACAACTTAAGAAAGCCACCAACAATTTTGATGAGAGCTTAGTCATTGGTAAAGGAGGTTATGGTACAGTTTTCAAAGGAGTTCTCTCAAATAACAAAGTTGTAGCTATCAAAAAGTCCAAAATAGTGGATAAGAGCCAGGTGGAACAATTCATCAATGAGGTCATTATACTGTCACAGATCAATCACAGGAATGTGGTCAAACTCTTGGGATGTTGTCTGGAAACAGAAGTTCCTTTACTAGTCTATGAATTCGTTAACAATGGCACCCTTTATGATTATTTACATAACCAAGGTCAGGGAGTCAATGTGTCATGGAAAACACGTCTAAGAATAGCTACAGAAGCAGCTGCAGCTCTATCATATTTGCACTCAGCAGCTTCCATACCCATCATCCACAGAGATGTGAAGACTGCTAACATACTCTTAGATGACACTTACACTGCCAAAGTCTCTGACTTTGGAGCTTCAAGATTGGTTCCACTTGACCAAACTGAAATAGCCACAATTGTGCAAGGAACCTTTGGGTATTTAGACCCAGAATACATGCAATCAAGCCAGTTGACTGAAAAGAGTGATGTCTATAGCTTTGGGGTGGTTCTTGTAGAGTTGCTAACGGGGGAGAAACCTTTCTCTTTTGACAGGGCAGAAGGGAAACGAAGTCTTACAGTTCACTTTTTGTGTAGCTTGAAAGAGGATCGTCTGTTTGATGTTATTCAGGTGGGACTTTTGGATGAAGAAAACCAGCAGGAGATTATGCAGGTTGCTATTCTTGCTGCCAGATGCTTGAGACTTATAGGGGAGGAAAGGCCTAGCATGAAGGAAGTGACAATGGAACTGGAGGGAATAAAGCTTGTGAAGAAACACCCTTGGATCAATACAGGCAAAAATTTTAATGAGAGTCAATACTTACTTTGTGAAACACAGAGCTCTTATGCATGGTGA


Promoter Sequence:
>Vu_02027::LG1:24840003-24842003(+)
ATTAGAATCTTCCTTTCGTCAAGCATATTATCTCATTTAGAAGCTATTTTCAATTCATCCATAAAAGGAGTCTCACTAGATGTCAAAGGATTAGGAACTACCATTGACCATACAAATTATTGATAATGAGAGTGAAATCCTTTAAAGGAAACATACCTACAAACTATTGACAATGCGAGTGACATCCTCTAAAGGAGGCATACCAACGAAGGAATTGAATTTCACTAGCACACCACCATCAAGATTCTTAACAAGAGAATATTCATTCACAACACAAATATTATCATGATTATCCACCACTAGCTCAAGCTCAGGTTGTACCACCTTAGGTTGCAAAAATTGAACCATAGACTCCACCATAAGCTCCACCATACGCTTCATCACAGGCTTTATCACAGGCTCTACCATAAACTTCACCCTTTAAGCTAAAAAACTCTTAGGTCCATCATCGCATCAACCACCTTAGGACAATAATGTTGTTGTATTTTTTTCTCAAATTATTTTCTCCCGCTAGAAATAACATTAGCATCATGTTGTAACTGTCTACAATTAGATAGATCATGACCAATTACTTTACAATTTGAAAAGAATAAAGTTAATTTCTCATATTCCACATCAATAATAAACACAAATTTTGGTCTTTCCACCAAAACTAATTAGGTAAATAAGATAAAAAGTCAACATAAGTCAAGAAACGTGCTAAGAAACCCTGAGACTTATTCTTGGTGTACATCTAAAGATAAAGGTGTACAAATTTCACATGTTATTTGGAAAACCACTTTCAGTTGCCAATATTTCAAAGGAAGGTTATGAATGTGAATTCCCAACATTGAGTTTTTGTGAGTTTCATCGAAGTGGGGACAAAATTGTTTATCCAAGAAAAAGCACCAAGAATGCTAGGAGATAAATTCCAAGTTCCCAACAACCAAAATCTTTTGCATGTCTTCTAAAGTGGAAAAAACAAATTCATAAAACCCTTTGCTAAGTGGAATTATCTTCCAATGACCCAAATGCTTCCAAGTCACACCAAGTTTTTTACAAAGATTTAAATGTGTAAGCAATTTATCCCATTTTGTTAACAAAATACGCCTATACAAATGATTTTTTCACTCCATACTACCAAGATAAACTCCTTTAGAAATCTCCACATAAAGCATATCACACACAATAAAGGACCTGGATAAATGTACTTTATTTTTATGTCCACACATTTGAAGTAGATTTAAGGAAAGTTGACTTTCCTTGATGATCTTGTCAGCAACCCCAATGCATTTGAAAATTAAAAAGAAAAAAAAAAAAAAGAGATATCATGCTGCACTCCTTCCTTCAACCCACTCACCCACCCACAAACAACACCTACTATCATGAACCTAAAGTGGAGGCAAACAAACCATTAAACTAATGTGTGAAACTTGCACGTGATGATGCGTTGCAATTGCATCCTCACACCATCCAAACCACAATCACACACCAAGAAGATTGTTTCTTGATGCTAGAGTTTATTGTTTATTCTTTGTATTTTTACAAATCTATTATTTATTTTTTTATAAACTTATTAACTTTTTAAACCTATAAATATTGTTTTCAATGATTCTATTCAAAACATAATTATAAAGTTAAAATTATTTATTATTTTTTATCAACCTCTAAATCTCTTTTACTGTACACAAACAAATAACAAATCGTGCATAAACATGAGTTTAAAACTAGTTTGTTAATAAAATGATAAATTTTCCTAATCACTCAAAAAATAATAATTATTATCATAAGAATACACTCATCAATAAATATTGACATTAATCGCAATGTAGTTTTTTAATAAAACTTTTATTAATTGCAATGTCGCGGACGTGAACATATTTAAGGCTTCATTTTTTTCTTAAAAATGACGAATACTAAGTACGCGTGTAAGTCTCCGTCAACGATTAAGATGTTCATGTCTGTAATCGTTTAGCAAGTCGTATATTTCTTGTCCGTAATCGTTAGCCAGTAAAAGAATA


Gene Sequence:
>Vu_02027(+)
ATGGCAGGAATGAGATTGAAGGAGATGCAGAAGCAACTGACCAGACTGACCGTGGTGTTACTGATGGCCTTAGAAGCCGCCAGCCAAGCCCTGCCCGGATGCCCGTACTCATGCGGAATTGTTTCATCGATTCCGTATCCATTCGGCATCGGCAATTCAAACCTCACCGGTGAAAACTGTTTTCTGGACAAAGAATTGAATCTCACTTGCACAAACTCAACCTTGTATCGCGGTAAAGGTAACGTCCAAATTCTGAACATAACCCTCGCCGGTAAAATCGACATGCTCACCTACATCTCCGAGGTCTGCAAAAACGAATCGTTAGGTAGAGAAGAAACACACGGCTACGATGTCAGTCTCACAACACCGGCTTTTTCCATTTCTAGTGAGGACAACAAGTTCGTGACCGTAGGCTGCGATACCTACGGCTATCTCAACAGTTTCCGGAACGGCACAGAATCTTCAACGGGGTGCTTGACCAGGTGCGACACCTTAGAGAGCGTTGAAAGCATGCAGAGAAGTGGAAACTGCACCGGCATAGGGTGTTGCCAGGTCGACATTCCTCCTGGGATGAAGAACATCACTTTTCAAGCTTTCTCCTTCAACAATTTCAATTCCACTTCCGATTTCAACGACTGTGGCTTCTCCTTCGTCGTCAAAAACGGCAACTACACTTTCTCCGTCGATCATTTAAACGGCGCCCCGTTCAGTATGACACCTATTGTCATGGATTGGAGCGTTGGAAACGACACGTGCGAAGCTTCCATGCTCAGAGCAGATTATGCATGCAAGAGTCCTTATAGCGAGTGTGAGAACTCCCCGTTTGCATATGGTTACCGATGCAAATGTAAACCAGGCTTTCAGGGAAACGCTTACCTTCTCCATGGTTGCCAAGGTAATTCCTTTATTTATTACTTAATTTAACATTTAGACTAATTTAACAACTAAATTTTTAATTTAACAACTACATTTTGGATTCAAATTAGCTTACGCATTTTTCTTAACATATTATTAATTTAAACGTGCTAATTTTTAATACTATAAACAAGGTCTTTGTCATATACGTATATATATGGCATGATGGGTTGAGTTTATAAGTCTCTTTAGAGATTTCATGCATAATAGTGGTTATTCCAATTACACTGTAATCATAATCAAACGAAATATATTAATTATTAATTCCCAATTCATTAGATCTGTTTATGTCAAACATTATCATCCTTTGATAATTTATTAATTTGATGTCAAGCTTTTATTCTTAATCTTCTTTCTCCTTCCTTCTTATTCAACCTAAGGGTCTAAAATAGAAAATTTGTAAGTTTTTTTTTATATATATTATTCACATGTATTATTTAATGTGTCATTTAGACTTACAATTTCTTTGTAGACATTCCTGAGTGTAGTAGTAACAAACACAATTGCGATAGTGAAGATCATTGTCATGAAACTCCGGGTTCTTTTGAATGTTTCTGTCCTGACGGACTTATCGGAAATGGGACAAAAGAAGGTGGAGGATGCCAAAAAAGGCAGCCGGCCGATGCTTTTATGAAGATCGTCATCGGTATGTAAATAAATAATTTATTTCAGTTTTGTTTTTCTTGATGTTTTTAAACAATGGTTATTCAACACAGAACTAATAAAATAATTTGTTATTATGAAAAGGATGTGTTATTACGAAATCCTTTAAGGATAAAAATACTCATTTAACAGATAATATATTAACAGTTCACTTTTTATAATTTTTTAAAACTTTTTAAAATATTATTATGTTATTAAAGTAAATATTTTATTTTTTAAAACATATCAAACTGTATTTTTTTATCAAAAAAAAAATGGGTTATTAAAATTTTCTCACTCTATTGTATAAGCGCTTTATTCATAATCATATTTTGCTAACAGGCGCAGGTGTAGGATTAATTGCTCTGTTCATAGGGATTTTTTGGTTGTACTTAATGTTTCAAAAAAGGAAAGTCTTAAAATTAAAGCAGAAGTTTTTTCAGCAGAACGGAGGAATCATTCTAAGACAACAACTCTCCACAGAAGAAGACTCATCTCAGACCACTACAATTTTCAGTGCAGAACAACTTAAGAAAGCCACCAACAATTTTGATGAGAGCTTAGTCATTGGTAAAGGAGGTTATGGTACAGTTTTCAAAGGAGTTCTCTCAAATAACAAAGTTGTAGCTATCAAAAAGTCCAAAATAGTGGATAAGAGCCAGGTGGAACAATTCATCAATGAGGTCATTATACTGTCACAGATCAATCACAGGAATGTGGTCAAACTCTTGGGATGTTGTCTGGAAACAGAAGTTCCTTTACTAGTCTATGAATTCGTTAACAATGGCACCCTTTATGATTATTTACATAACCAAGGTCAGGGAGTCAATGTGTCATGGAAAACACGTCTAAGAATAGCTACAGAAGCAGCTGCAGCTCTATCATATTTGCACTCAGCAGCTTCCATACCCATCATCCACAGAGATGTGAAGACTGCTAACATACTCTTAGATGACACTTACACTGCCAAAGTCTCTGACTTTGGAGCTTCAAGATTGGTTCCACTTGACCAAACTGAAATAGCCACAATTGTGCAAGGAACCTTTGGGTATTTAGACCCAGAATACATGCAATCAAGCCAGTTGACTGAAAAGAGTGATGTCTATAGCTTTGGGGTGGTTCTTGTAGAGTTGCTAACGGGGGAGAAACCTTTCTCTTTTGACAGGGCAGAAGGGAAACGAAGTCTTACAGTTCACTTTTTGTGTAGCTTGAAAGAGGATCGTCTGTTTGATGTTATTCAGGTGGGACTTTTGGATGAAGAAAACCAGCAGGAGATTATGCAGGTTGCTATTCTTGCTGCCAGATGCTTGAGACTTATAGGGGAGGAAAGGCCTAGCATGAAGGAAGTGACAATGGAACTGGAGGGAATAAAGCTTGTGAAGAAACACCCTTGGATCAATACAGGCAAAAATTTTAATGAGAGTCAATACTTACTTTGTGAAACACAGAGCTCTTATGCATGGTGA