Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_02026 LG1 24817139 24820179 hypothetical protein
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/C 24817165 missense_variant p.Gln9His
G/T 24817181 missense_variant p.Val15Leu
G/C 24817258 synonymous_variant p.Ser40Ser
A/G 24817464 missense_variant p.Glu109Gly
G/A 24817478 missense_variant p.Asp114Asn
A/T 24817479 missense_variant p.Asp114Val
G/A 24817485 missense_variant p.Ser116Asn
C/T 24817494 missense_variant p.Thr119Ile
C/G 24817500 missense_variant p.Ala121Gly
T/C 24817504 synonymous_variant p.Phe122Phe
C/G 24817536 missense_variant p.Thr133Ser
G/A 24817586 missense_variant p.Glu150Lys
G/C 24817597 synonymous_variant p.Thr153Thr
C/G 24817662 missense_variant p.Thr175Ser
C/G 24817663 synonymous_variant p.Thr175Thr
A/G 24817706 missense_variant p.Asn190Asp
C/A 24817713 missense_variant p.Thr192Asn
G/A 24817754 missense_variant p.Asp206Asn
C/A 24817786 synonymous_variant p.Val216Val
A/G 24817797 missense_variant p.Asn220Ser
A/G 24817823 missense_variant p.Asn229Asp
G/A,* 24817839 missense_variant p.Ser234Asn
G/A 24817866 missense_variant p.Ser243Asn
A/G 24817875 missense_variant p.Asn246Ser
C/T 24817890 missense_variant p.Ala251Val
T/A 24817896 missense_variant p.Met253Lys
T/A 24817899 missense_variant p.Leu254His
C/A 24817900 synonymous_variant p.Leu254Leu
T/G 24817928 missense_variant p.Tyr264Asp
G/T 24817936 missense_variant p.Glu266Asp
G/A 24817993 synonymous_variant p.Gln285Gln
A/G 24817996 synonymous_variant p.Gly286Gly
T/G 24818002 synonymous_variant p.Ala288Ala
C/G 24818012 missense_variant p.His292Asp
T/C 24818017 synonymous_variant p.Gly293Gly
C/G 24818021 missense_variant p.Gln295Glu
C/A 24818032 splice_region_variant&intron_variant
T/G,* 24818035 intron_variant
T/A 24818040 intron_variant
A/C,* 24818055 intron_variant
G/A 24818101 intron_variant
C/A 24818150 intron_variant
G/T 24818158 intron_variant
G/A 24818237 intron_variant
T/C 24818241 intron_variant
A/T 24818251 intron_variant
A/G 24818262 intron_variant
T/C 24818307 intron_variant
A/T 24818312 intron_variant
C/T 24818313 intron_variant
G/C 24818366 intron_variant
A/T 24818404 intron_variant
T/G 24818523 missense_variant p.Ile310Arg
G/A 24818533 synonymous_variant p.Ser313Ser
T/C 24818542 synonymous_variant p.Phe316Phe
C/T 24818546 missense_variant p.Leu318Phe
G/C 24818553 stop_lost p.Ter320Serext*?
A/T,G 24818569 stop_lost p.Ter325Trpext*?
A/C 24818577 missense_variant p.Tyr328Ser
G/A 24818588 missense_variant p.Asp332Asn
C/T,* 24818622 missense_variant p.Ala343Val
G/T 24818624 missense_variant p.Gly344Cys
T/G 24818634 missense_variant p.Phe347Cys
A/C 24818655 splice_region_variant&intron_variant
A/T 24818656 splice_region_variant&intron_variant
A/T 24818667 intron_variant
C/T 24818688 intron_variant
A/C 24818694 intron_variant
T/G 24818727 intron_variant
G/A 24818743 intron_variant
T/A 24818814 intron_variant
T/G 24818817 intron_variant
C/G 24818845 intron_variant
C/A 24818863 intron_variant
A/T 24818866 intron_variant
A/G 24818877 intron_variant
A/T 24818892 intron_variant
A/G 24818906 intron_variant
G/C 24818930 intron_variant
G/A 24819009 missense_variant p.Asp365Asn
G/*,A 24819036 missense_variant p.Glu374Lys
C/T 24819048 missense_variant p.Leu378Phe
A/G 24819102 missense_variant p.Thr396Ala
T/A 24819107 synonymous_variant p.Thr397Thr
A/G 24819115 missense_variant p.Lys400Arg
A/G 24819164 stop_retained_variant p.Ter416Ter
G/T 24819165 stop_gained p.Glu417*
A/T 24819201 missense_variant p.Arg429Trp
T/C 24819278 synonymous_variant p.Asn454Asn
G/A 24819294 missense_variant p.Gly460Ser
T/C 24819309 stop_lost p.Ter465Glnext*?
T/C 24819325 missense_variant p.Ile470Thr
A/G 24819363 missense_variant p.Arg483Gly
A/T 24819384 missense_variant p.Ser490Cys
T/C 24819408 missense_variant p.Cys498Arg
C/T 24819420 missense_variant p.His502Tyr
G/A 24819430 stop_retained_variant p.Ter505Ter
G/C 24819444 missense_variant p.Ala510Pro
A/G 24819468 missense_variant p.Met518Val
C/T 24819504 missense_variant p.Arg530Cys
C/G 24819566 missense_variant p.Asp550Glu
T/C 24819592 missense_variant p.Leu559Ser
T/G 24819597 missense_variant p.Cys561Gly
T/A 24819639 stop_lost p.Ter575Argext*?
G/A 24819681 missense_variant p.Val589Ile
A/C 24819693 synonymous_variant p.Arg593Arg
A/G 24819823 missense_variant p.Asn636Ser
A/G 24819834 missense_variant p.Met640Val
A/C 24819838 stop_lost p.Ter641Serext*?
A/T 24819840 missense_variant p.Ile642Phe
C/G 24819868 missense_variant p.Ser651Cys
C/G,A 24819880 missense_variant p.Thr655Asn
A/G 24819910 missense_variant p.Tyr665Cys
C/G 24819913 missense_variant p.Ala666Gly
T/G 24819919 missense_variant p.Phe668Cys
C/A,T 24819950 stop_gained p.Tyr678*
A/G 24819963 missense_variant p.Thr683Ala
G/A 24819967 missense_variant p.Cys684Tyr
C/G 24819968 missense_variant p.Cys684Trp
T/G 24819979 missense_variant p.Ile688Ser
A/C 24819990 missense_variant p.Ile692Leu
T/C 24819991 missense_variant p.Ile692Thr
A/G 24819993 missense_variant p.Arg693Gly
A/G 24819996 missense_variant p.Arg694Gly
C/T 24820010 synonymous_variant p.Tyr698Tyr
A/G 24820011 missense_variant p.Lys699Glu
G/C 24820020 missense_variant p.Ala702Pro
G/A,T 24820035 missense_variant p.Gly707Arg
C/T 24820083 missense_variant p.Leu723Phe
C/A 24820124 stop_gained p.Tyr736*
A/G 24820146 missense_variant p.Thr744Ala
A/T 24820173 stop_gained p.Lys753*

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_02026.1
MRLKEMQKQLTRLTVVLLMALEAASQALPGCPYSCGIVSSIPYPFGIGNSNLTGENCFLDKELNLTCTNSTLYRGKGNVQILNITLAGKIDMLTYISEVCKNESLGREETHGYDVSLTTPAFAISSEDNKFVTVGCDTYGYLNSFRNGTESSTGCLTRCDTLESVESMQRSGNCTGIGCCQVDIPPGMKNITFEAFSFNNFNSTSDFNDCGFSFVVKNGNYTFSVDHLNRAPFSMTPIVMDWSVGNDTCEASMLRADYACKSPYSECENSPFEYGYRCKCKQGFQGNAYLLHGCQDIPECTNNKHNCDSEYHCRETLGSFECFCPDGLIGNGTKEGGGCHPRQPADAFTKIVIGAGVGLIALFIGISWLYLMYQKRKVLKLKQKFFQQNGGIILRQQLSTKEDSSQTTTIFSAEQLKKATNNFDESLIIGKGGYGTVFKGFLSNNKVVAIKKSKIVDQSQVEQFINEVIILSQINHRNVVKLLGCCLETEVPLLVYEFVNNGTLFDYLHKQGQGVNVSWKTRLRIATEAAAALSYLHSAASIPIIHRDVKTANILLDDTYTAKVSDFGASRLVPLDQTEIATIVQGTFGYLDPEYMQSSQLTEKSDVYSFGVVLVELLTGEKPFSFDRAEEKRSLTTHFLCRLKEDRLFDVLQVGLLDEENQQEIMQVSILAARCLRLTGEERPAMKELTMELEGIKLTKKQPWINAGRNFEESEYLLYEAQSSYEHGDSSSGQQNTGYDTLRELELIDFGNGR*


CDS Sequence:
>Vu_02026.1
ATGAGATTGAAGGAGATGCAGAAGCAACTGACCAGACTGACCGTGGTGTTACTGATGGCCTTAGAAGCCGCCAGCCAAGCCCTGCCCGGCTGCCCGTACTCATGCGGAATTGTTTCATCGATTCCGTATCCATTCGGCATCGGCAATTCAAACCTCACCGGTGAAAACTGTTTTCTGGACAAAGAATTGAATCTCACTTGCACAAACTCAACCTTGTATCGCGGTAAAGGTAACGTCCAAATTCTGAACATAACCCTCGCCGGTAAAATCGACATGCTCACCTACATCTCCGAGGTCTGCAAAAACGAATCGTTAGGTAGAGAAGAAACACACGGCTACGATGTCAGTCTCACAACACCGGCTTTTGCCATTTCTAGTGAGGACAACAAGTTCGTGACCGTAGGCTGCGACACCTACGGCTATCTCAACAGTTTCCGGAACGGCACAGAATCTTCAACGGGGTGCTTGACCAGGTGCGACACCTTAGAGAGCGTTGAAAGCATGCAGAGAAGTGGAAACTGCACCGGCATAGGGTGTTGCCAGGTCGACATTCCTCCTGGGATGAAGAACATCACTTTTGAAGCTTTCTCCTTCAACAATTTCAATTCCACTTCCGATTTCAACGACTGTGGCTTCTCTTTCGTCGTCAAAAACGGCAACTACACTTTCTCCGTCGATCATTTAAACCGCGCCCCGTTCAGTATGACACCTATTGTCATGGATTGGAGCGTTGGAAACGACACGTGCGAAGCTTCCATGCTCAGAGCAGATTATGCATGCAAGAGTCCTTATAGCGAGTGTGAGAACTCCCCGTTTGAATATGGTTACCGATGCAAATGTAAACAAGGCTTTCAGGGAAACGCTTACCTTCTCCATGGTTGCCAAGACATTCCGGAGTGTACTAATAACAAACACAATTGCGATAGTGAATATCATTGTCGTGAAACTTTGGGCTCTTTTGAATGTTTCTGTCCTGACGGACTTATCGGAAATGGGACAAAAGAAGGCGGAGGATGCCACCCAAGGCAGCCGGCCGATGCTTTTACGAAGATCGTCATCGGCGCCGGTGTAGGGTTAATTGCTCTGTTCATAGGGATTTCTTGGTTGTACTTAATGTACCAGAAAAGGAAAGTCTTGAAATTAAAGCAGAAGTTTTTTCAGCAGAACGGAGGCATCATTCTGAGACAACAACTCTCCACAAAAGAAGACTCATCTCAGACCACTACAATTTTCAGTGCAGAACAACTTAAGAAAGCCACCAACAATTTTGATGAGAGCTTAATCATAGGTAAAGGAGGTTATGGTACAGTTTTCAAAGGATTTCTCTCCAACAACAAAGTTGTAGCAATCAAAAAGTCCAAAATAGTGGATCAGAGCCAGGTGGAACAATTCATTAATGAGGTCATTATATTGTCACAGATTAATCACAGGAATGTGGTCAAACTCTTAGGATGTTGTCTGGAAACAGAAGTTCCTTTACTAGTCTATGAATTTGTTAACAATGGCACCCTTTTTGATTATTTACATAAGCAAGGTCAGGGAGTAAATGTGTCATGGAAAACACGTCTAAGGATAGCTACAGAAGCAGCCGCAGCTCTATCATATTTGCACTCAGCAGCTTCCATACCCATCATCCACAGAGATGTGAAGACTGCTAACATACTCTTAGATGACACTTACACTGCCAAAGTTTCTGACTTTGGAGCTTCAAGATTGGTTCCACTTGACCAAACTGAAATAGCCACAATTGTGCAAGGAACCTTTGGGTATTTAGACCCAGAATACATGCAATCAAGCCAGTTGACTGAAAAGAGTGATGTCTATAGCTTTGGGGTGGTTCTTGTAGAGTTGCTAACGGGGGAGAAACCTTTCTCTTTTGACAGGGCAGAAGAGAAAAGAAGTCTTACAACTCACTTTCTATGTAGATTGAAAGAGGATCGTCTGTTTGATGTTCTTCAGGTAGGACTTTTGGATGAAGAAAACCAGCAGGAGATTATGCAGGTTTCTATTCTTGCTGCTAGATGCCTGAGACTTACAGGGGAGGAAAGACCTGCCATGAAGGAATTGACAATGGAATTAGAAGGAATAAAGCTTACAAAGAAACAGCCTTGGATCAATGCGGGAAGGAACTTTGAGGAGAGTGAATACTTGCTTTATGAGGCACAAAGCTCTTATGAACATGGTGATAGTAGTAGTGGCCAACAAAATACTGGATATGATACCTTGAGAGAACTTGAACTAATTGACTTTGGTAATGGAAGATAA


Promoter Sequence:
>Vu_02026::LG1:24815139-24817139(+)
CTCAGAAATTTTGTCGGTAAATTGAATTTATCGACGACTTAAGGTTCGTCACTAATATTTCGTCGGTAATTTAACCTTTTCCTATAGTGGAACTACTTAATCTTTCTGAGAAGTTTCTAAGAAACTATTTGTGTAAAGGATAAGTTGTTCATCCTTTTGCGTGTCAAAAGAAAGTGTTAGTAATCTCTTGTGTGTTCAAGAGAGGTGAGCTCTATCCTTTATTTTATTCTCTTAAGTTATATGTTCTGGTTATTTCATAATTATTAGTTAATCACTCTTTTAGAAAGATTAATAACTGAACATAATATCTTTTGATCTAAACTGTATAAAATCACTTGTGTATGCTTCTTTTTCTACATTCTTTTATTTACTTGTTATTATCTTAAAGAATAATTTTTATTATGAAATCAGTTTTAAAAAGAACAACTTTTTTAAAAAGTATAGTTTTTATCAAGTAAACCAATTTACCCTCTATTTTTATCTGTCCAAATATTGCGTTTTTCTAACATATATTAATATAGATTTTCTAACATATATTAATATAGATCTATTCACTAAAAAAAATTATTAACAAATAACGTTAGTTGGTAATAATAAATTTTTGTTGATAAAAAATATTTTAATTAAAAAATAACAACCAAAATGTTAATAAAATTATAAATTTTCCTCACAATTAAAAAACTAGTAATAATTATCCCAAAAATACATAACATTAATTACCGATAAATATTTATTTATAATTATTGCAATTTAACTTTTTCCTTCATGAATATTTTTTTTAAATGTGTGATATAATTTTATTGTAGATTTATTGTTATTTTTTTTATGTTTTTTATTATTTTTTTATAAAATCGACAACTATGTCTACCTACAACTTATTTAATCACCTTTCCTTTTTCTTATTCTTAAAAACGACTTATATTAACTGCGCGAGTAAGTCTCCGTCAACGATTAAGATGCTCATGTCTGTAATCGTTTAACAAGTCGAAGTATTTTTTCTTATCTGTAATTGTTTAACAAGTCAAAGTATATATAACACGCTCAGCAAAAGAATTAATATAAACCATACAAATACTAACGTCAATTCTTTGCGTGATGACTAACTCGTCTACGTTTATCAAGCGTACGATTTCAATAATCTAATTTAAAATCTCATTCTTTTCAAAATTTTACTTTCAAATAACACATAAATTAATTTTAATTTAGGATTAATTTATTTTATCATTTTTTAATTTAATAAAAACTTCATTATTTTCTCTCTTAATGATCATATTCGTGTATTTAAATAGGAATTCTTAAAAGGATAATTCATTATTTTAAAAAAATTAAAATAATTTATAACACATTTGAAAAAGTTTTAAAATTATAATATTTTATTAAAATAATTATATTATCTAAAATTAACAAATATTTCAAATATTAATTTTATGTTTTTGAATTCATATTTTACTCTTTATAATTGTTTTAATTTAATTTTACTTGAAATGTGTAATAAATCATTATAAAATTGATGATTTTATAATTTTCATTTTATATTAAACATTAAAAATATTTTTTAATTTTTACATTAATTATAATATTATTTCAAATTAATAAAAATTTTAGTATTTTTTTAACGCGTGAAAATAAAATAAAAACGTTAAATGACAAAATAAGACAATAAACTAAAATAATAAACAAATAAAAAATATTAAATTTTAAATATTCACTAAAAATAAAAAATATAAAATATAAAACCAGTTAGAAATATGCAAATTTCTTGGATATCATTAATAATTAGAGTTATGTAAATTAAATGGAGGTAGGTCCCTGATCAATATAAATACCGTGAAAAGTGGGATTGTGCACATATGGCAATCCCATATGTTCTTAAAAATGACGAATACTAAGTACGCGTGTAAGTCTCCGGTCAACGATTAAGATGTTCATGTCTGCAATCGTTTAGCAAGTCGTATATTTCTTGTCCGTAATCGTTAGCCAGTAAAAGAATTTGGCAGGAA


Gene Sequence:
>Vu_02026(+)
ATGAGATTGAAGGAGATGCAGAAGCAACTGACCAGACTGACCGTGGTGTTACTGATGGCCTTAGAAGCCGCCAGCCAAGCCCTGCCCGGCTGCCCGTACTCATGCGGAATTGTTTCATCGATTCCGTATCCATTCGGCATCGGCAATTCAAACCTCACCGGTGAAAACTGTTTTCTGGACAAAGAATTGAATCTCACTTGCACAAACTCAACCTTGTATCGCGGTAAAGGTAACGTCCAAATTCTGAACATAACCCTCGCCGGTAAAATCGACATGCTCACCTACATCTCCGAGGTCTGCAAAAACGAATCGTTAGGTAGAGAAGAAACACACGGCTACGATGTCAGTCTCACAACACCGGCTTTTGCCATTTCTAGTGAGGACAACAAGTTCGTGACCGTAGGCTGCGACACCTACGGCTATCTCAACAGTTTCCGGAACGGCACAGAATCTTCAACGGGGTGCTTGACCAGGTGCGACACCTTAGAGAGCGTTGAAAGCATGCAGAGAAGTGGAAACTGCACCGGCATAGGGTGTTGCCAGGTCGACATTCCTCCTGGGATGAAGAACATCACTTTTGAAGCTTTCTCCTTCAACAATTTCAATTCCACTTCCGATTTCAACGACTGTGGCTTCTCTTTCGTCGTCAAAAACGGCAACTACACTTTCTCCGTCGATCATTTAAACCGCGCCCCGTTCAGTATGACACCTATTGTCATGGATTGGAGCGTTGGAAACGACACGTGCGAAGCTTCCATGCTCAGAGCAGATTATGCATGCAAGAGTCCTTATAGCGAGTGTGAGAACTCCCCGTTTGAATATGGTTACCGATGCAAATGTAAACAAGGCTTTCAGGGAAACGCTTACCTTCTCCATGGTTGCCAAGGTAATTCCTTTATTTTTTACTTAATTTAACATTTAGACTAATTTAACAACTAAATTTTGGATTCAAATTAGCTTACGCATTTTTCTTAACATATTATTAATTTAAACGTGCTAATTTTTAATACTCTAAACAAGGTCTTTGTCATATACGTATATATATGGCATGATGGGTTGAGTTTATAAGTCTCTTTAGAGATTTCATGCATAATAGTGGTTATTCCAATTACACTGTAATCATAATCAAACGAAATATATTAATTATTAATTCCCAATTCATTAGATCTGTTTACGTCAAACATTATCATCCTTTGATAATTTATTAATTTGATGTCAAGCTTTTTAGTCTTGAAGTTCTTTCTCTTTCCTTCTTGTTTAAAATAAGTTATTTTTTTATATATTATTCACGTGTCTTATTTAATGTGTCATTTAGATTTACAATTTGATTTTGTTTGTAGACATTCCGGAGTGTACTAATAACAAACACAATTGCGATAGTGAATATCATTGTCGTGAAACTTTGGGCTCTTTTGAATGTTTCTGTCCTGACGGACTTATCGGAAATGGGACAAAAGAAGGCGGAGGATGCCACCCAAGGCAGCCGGCCGATGCTTTTACGAAGATCGTCATCGGTAAGTAAATAAAAAAATTTATTTCAGTTTTGTTTCTGTTGATGTTTTCAAAAAATGGTTATTCAACACTGAATTAATAAAATAATTTGTGGTTATATACAAACGAAGTGTTACTATGAAACCTTGAATAAAAATACTCATTTAACATAATATATATTAACTGTTTACTTTTTTTTAACTTAAAATATTATTCTTATTAAAGTAAAAATTCTAATTTTGAACAGATATCAAACTGTATAATTTTTATATAAAAAAATGGGTTATTAAAATTTTCTCAGTCTATTGTATAATTGCTTTATTCATATTCATACTTTGGTAACAGGCGCCGGTGTAGGGTTAATTGCTCTGTTCATAGGGATTTCTTGGTTGTACTTAATGTACCAGAAAAGGAAAGTCTTGAAATTAAAGCAGAAGTTTTTTCAGCAGAACGGAGGCATCATTCTGAGACAACAACTCTCCACAAAAGAAGACTCATCTCAGACCACTACAATTTTCAGTGCAGAACAACTTAAGAAAGCCACCAACAATTTTGATGAGAGCTTAATCATAGGTAAAGGAGGTTATGGTACAGTTTTCAAAGGATTTCTCTCCAACAACAAAGTTGTAGCAATCAAAAAGTCCAAAATAGTGGATCAGAGCCAGGTGGAACAATTCATTAATGAGGTCATTATATTGTCACAGATTAATCACAGGAATGTGGTCAAACTCTTAGGATGTTGTCTGGAAACAGAAGTTCCTTTACTAGTCTATGAATTTGTTAACAATGGCACCCTTTTTGATTATTTACATAAGCAAGGTCAGGGAGTAAATGTGTCATGGAAAACACGTCTAAGGATAGCTACAGAAGCAGCCGCAGCTCTATCATATTTGCACTCAGCAGCTTCCATACCCATCATCCACAGAGATGTGAAGACTGCTAACATACTCTTAGATGACACTTACACTGCCAAAGTTTCTGACTTTGGAGCTTCAAGATTGGTTCCACTTGACCAAACTGAAATAGCCACAATTGTGCAAGGAACCTTTGGGTATTTAGACCCAGAATACATGCAATCAAGCCAGTTGACTGAAAAGAGTGATGTCTATAGCTTTGGGGTGGTTCTTGTAGAGTTGCTAACGGGGGAGAAACCTTTCTCTTTTGACAGGGCAGAAGAGAAAAGAAGTCTTACAACTCACTTTCTATGTAGATTGAAAGAGGATCGTCTGTTTGATGTTCTTCAGGTAGGACTTTTGGATGAAGAAAACCAGCAGGAGATTATGCAGGTTTCTATTCTTGCTGCTAGATGCCTGAGACTTACAGGGGAGGAAAGACCTGCCATGAAGGAATTGACAATGGAATTAGAAGGAATAAAGCTTACAAAGAAACAGCCTTGGATCAATGCGGGAAGGAACTTTGAGGAGAGTGAATACTTGCTTTATGAGGCACAAAGCTCTTATGAACATGGTGATAGTAGTAGTGGCCAACAAAATACTGGATATGATACCTTGAGAGAACTTGAACTAATTGACTTTGGTAATGGAAGATAA