People Important Links Contact Us
Chickpea portal

Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

Menu

Genetic Resources

Genomic Resources

Agronomic Practice

Publications

Nutrition

Social Resources
  • Maps
  • Gene Families
  • Gene Search
  • MARKERs  
    • SSRs
    • SNPs
  • JBrowse
  • Download

Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_01846 LG1 21931685 21932457 PREDICTED: ethylene-responsive transcription factor SHINE 2-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated
Cellular Component   located in   nucleus, nucleus
Molecular Function   enables   DNA-binding transcription factor activity, DNA-binding transcription factor activity
No SNPs found.

Sequence Details:

Protein Sequence:
>Vu_01846.1
MVQAKKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGRNAKTNFPTRALNEAEGGSNSTVCEDPFSSPNVLAEDLSRKLKRCCRDPSPSLTCLRLDADNSHIGVWQKGAGAHSDSNWIVRVELGKKRAETESGVSEGSTQNDGEEDEEDRIVMQMIDELLNWNYPCAGSSIINSP*


CDS Sequence:
>Vu_01846.1
ATGGTCCAAGCAAAGAAGAAGTTCAGAGGAGTGAGGCAACGCCAATGGGGCTCATGGGTCTCAGAAATTCGTCACCCTTTGCTGAAGAGAAGGGTGTGGCTAGGGACATTTGAGACAGCAGAGGCTGCAGCAAGGGCATATGACCAAGCAGCCATTTTGATGAATGGTCGAAATGCCAAGACCAATTTCCCTACACGAGCATTGAATGAGGCTGAAGGTGGCAGCAATTCCACCGTCTGTGAGGACCCTTTTTCGTCTCCGAATGTTCTTGCCGAGGATCTGAGTAGAAAACTGAAGAGGTGTTGCAGAGACCCTTCTCCATCCCTCACATGTCTGAGACTGGATGCTGACAATTCCCACATTGGAGTGTGGCAAAAGGGTGCAGGTGCACACTCAGACTCCAATTGGATTGTGAGGGTGGAGCTTGGGAAGAAACGTGCAGAGACTGAGTCAGGTGTGTCAGAAGGATCTACACAAAATGATGGTGAAGAAGACGAAGAAGATAGAATTGTGATGCAGATGATTGATGAGCTTCTTAATTGGAACTATCCATGTGCTGGTTCAAGTATAATTAATTCACCTTAG


Promoter Sequence:
>Vu_01846::LG1:21929685-21931685(+)
TCTACATAGACGTTTGACTGTACAAGTCGGACGTTCCATCAACATCACTCACTCATAAACGTCGAGTAGAGGTCGAATGTAAAAAAACCCAAAATAATGGATGTTTAAAGTGATTTCTGCACTAGTGACGTTTAACCCTAGTAAAATATGTATTGAAATGTTAGATTATATAAACACATTATTCACGTATAATTTATTATTCTCATCTCAATAAATTTACTATAAAAATTTAAAATCTTATGTAAAATTTTAAATTTATTGTGCATAAAAAAATATAACGAGAAAAAAAAAAGAGACACCTAACTAAAGTGTATCGTTATATCCACAAAAATAAAGTTAAAATGGGAAAATTTTAAATAGAAATAATAATAATTTAATAAATAAAGAATAATATTAAATCATGTAATGAATTTGTTACAGGGTCAGAGTTGAAGTTGAACACATAAAGTCAACGTACTTGCCAACATCATTAAATCTACCCACAAAATAAGCGTTGCGGAACTTAAATTGAAAATATACAGACATTTCAATCATTTAATTTAACTATTTTAAAGATTTAATATATTGAGGTTTATTTTATAATTAATATGGTATACATAATATAACTATTTTATAATTTATATTTTTTTAAAATTAATAATAAAATATACTCTTACTGTCTTAAAAAAAATTCCATTATGATTATGTTATATTTTTTTTATTGGTAGATTGAAAGTGAAGATAAAAAATTTACTATTATTTTCTTTTTTTCTTTGGAGCACAGCTAGTAGAGCTGTTAGAAAAGAAACCCTACCAGTGTTGCTCATTTATTTTAAGTTGTTAAGAAGTCAGGGACTTATCCTAACGTAGCAGGTGAAACCTTTAATGCATAACTGTAAAGCTCCAAAAAGAAATTCTAAGGAAGATAAAAAAAAATTAACTTCATGCAATTAAATGCTTTAAAAATAAAAAGGATTAAATCGAATAATATGTAAATCTCTCTTAATAAATTATATTAAGTTCTACCACCACATTAACACTTTTTTAATTATTTAAAATACACTATAGCAACATTCCTTACAAATTACTCTAATCCCGTTAATTACTTGAAAAATAGTTCATTTTCCACCTATTCAATATTACTTTAAATATTAAAAAGAACTCGAAATGTTTTTTTTATCAGTTATTAGTGTAATTTGTCCTAAATTTCTGAAAATATACTAAATTTTACCTTTTCATTAAAAATTTTATATTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATCCTTTAATGCGGGTAACCTAAATATATGTCGAAATATTATTTATTGGTGTTTACGGATATTTAATAATAAATATTAATCCTTTATTTCCTTGGTAGACAAGGGTGCATGCTCTTCATAAAGGTTAAAGGGATGGATCTCGTTAGATCATAATCACAAAGTGAAAAAAAAAACTATGATCAATTAGAAAATATTCATGATCAAATATGTTGAGCATGAAAAATAGGAAATCCAATAACTTGTTTAAAAATAATTTTAACTTTATTTCAACTTTAAAAATAGTTTACTTAAAATAAAATTTAATCATATTTAAATAATCTAAACTAAATATGGCTTTAGTCTCTTTAAAAAAGAACATTTAGAAAACATATATAATTAAACATATCAAATGTAAAAACGGAAAAAGTTTAAAAACATTAAGTTGAACCTAATTTCAAAAGGTTAATTTAAAAAATAAAATTTATATTATATTATAACGTGCTGCATCTCTTTGGTAATATTGTGTGACTAATTATTAGCCAGACTTTCCCACCAAATCAACCGACAATCTATATAAGTCTGACATTATCAGAAACCGAGTCTTCAAAGTTTGTCATTATTGTATCTCCACCCTTATATTAATTTCATGCAGCATCTTAATTACCTCGTACTTAGGTTCTCTTCATTCTAAAGTACCCTTATTTCCCACCACAAAGAGCCA


Gene Sequence:
>Vu_01846(+)
ATGGTCCAAGCAAAGAAGAAGTTCAGAGGAGTGAGGCAACGCCAATGGGGCTCATGGGTCTCAGAAATTCGTCACCCTTTGCTGTAAATCACCCATACTTCCTACTTTCAACTTTAACCTCTTGCAATATTATGTACTAAACCTTCTAAAAGTATACATTTAATATGATACATTAAATTATTAGAAAGATGTTACAGTTGTAGCATGAATTTCAGTTTCAGGCTGATGAAAGTTTATACATGCATTAACAGAGATGGTTTTGGATGAACAGGAAGAGAAGGGTGTGGCTAGGGACATTTGAGACAGCAGAGGCTGCAGCAAGGGCATATGACCAAGCAGCCATTTTGATGAATGGTCGAAATGCCAAGACCAATTTCCCTACACGAGCATTGAATGAGGCTGAAGGTGGCAGCAATTCCACCGTCTGTGAGGACCCTTTTTCGTCTCCGAATGTTCTTGCCGAGGATCTGAGTAGAAAACTGAAGAGGTGTTGCAGAGACCCTTCTCCATCCCTCACATGTCTGAGACTGGATGCTGACAATTCCCACATTGGAGTGTGGCAAAAGGGTGCAGGTGCACACTCAGACTCCAATTGGATTGTGAGGGTGGAGCTTGGGAAGAAACGTGCAGAGACTGAGTCAGGTGTGTCAGAAGGATCTACACAAAATGATGGTGAAGAAGACGAAGAAGATAGAATTGTGATGCAGATGATTGATGAGCTTCTTAATTGGAACTATCCATGTGCTGGTTCAAGTATAATTAATTCACCTTAG

NIPGR © 2020

This project is funded by the Department of Biotechnology
Ministry of Science and Technology
Government of India

Visits: 1321954