Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_01841 LG1 21828984 21831413 PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   protein autophosphorylation, protein autophosphorylation, protein autophosphorylation
Cellular Component   located in   plasma membrane, extracellular region
Molecular Function   enables   protein serine/threonine kinase activity, ubiquitin protein ligase binding, protein kinase activity, ubiquitin protein ligase binding, protein serine/threonine kinase activity, protein kinase activity, protein kinase activity, protein serine/threonine kinase activity, calmodulin binding, ubiquitin protein ligase binding
SNP Position Effect Amino acid change
A/G 21829253 synonymous_variant p.Val90Val
A/G 21829338 missense_variant p.Ile119Val
C/T 21829451 synonymous_variant p.Ser156Ser
A/G 21829628 synonymous_variant p.Lys215Lys
T/C 21829849 missense_variant p.Phe289Ser
C/T 21829928 synonymous_variant p.Ser315Ser
G/A 21830030 synonymous_variant p.Gly349Gly
T/A 21830354 synonymous_variant p.Pro457Pro
C/G 21830763 intron_variant
A/C 21830960 intron_variant
T/C 21830981 intron_variant
T/A 21831321 missense_variant p.Phe648Leu
C/T 21831324 synonymous_variant p.Thr649Thr

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_01841.1
MGKLWSLFSVMDTLLLCVLLSSEVVLTSTPRFGKTHPPIEGSQMTWIDKNGIFLVSYKGEFGFGFVTTSNDITLFRLAIVHMGKKTVVWVANRDLPVSNSDKFVFDEKGNIYLLKGSTIVWSPGTEGKRVSSMELKDTGNLVLLGKDSSVIWQSFSHPTDTLLPMQYFIEGMKLISEPGPNNLTYVLQIESGNAILSTGLQTPQPYWSMKEDSRKKLIHKSGDVVASATLNASSWSFYDETKSLLWQFDFSEESDSNGTWSLVLGSDGIITFSILQTGLASPRRIPQDFCSTPEPCDPYYICSGEKKCTCPSVLSSSPNCKPGFDSPCSSKGTIELLKADDRLNYFALGFVPPSSKTDLIGCKTSCSTKCSCLAMFFNTSSGNCFLLDWIGSFEKSVEDSGLVSYIKVVSSDGDTGHSGSSTVQAIVVVIIVIATLVIISVMLFVAHRCFRKKEDLPESPEENSEDDDFLEGLTGMPIRYSYNDLKTATSNFSVKLGEGGFGSVYKGVVPDGTQLAVKKLEGIGQGKKEFRVEVSIIGSIHHHHLVRLKGFCAEGSHRLLAYEETFEKSHFPSFAFKMMEEGRVREIVDSKLETNENDERVETAVKVALWCIQEDMSLRPSMSKVVQMLEGLCTVSKPPSCSVPGSQFYPNSDAGTSSGPSDCNSEANLSAVRLSGPR*


CDS Sequence:
>Vu_01841.1
ATGGGAAAACTGTGGTCTCTCTTCAGTGTTATGGATACCCTTTTGTTGTGTGTCCTTCTTTCGTCTGAAGTAGTTTTGACTAGTACTCCTAGGTTTGGCAAAACCCATCCGCCGATTGAAGGTTCTCAAATGACATGGATTGACAAGAACGGCATTTTTCTCGTTTCATACAAAGGAGAATTTGGATTTGGCTTTGTCACCACTTCAAATGACATCACATTGTTTCGACTGGCAATTGTCCACATGGGCAAAAAGACAGTGGTTTGGGTAGCAAATAGGGATCTTCCTGTTTCCAACTCTGATAAATTTGTGTTTGATGAGAAGGGAAATATCTACTTGCTTAAAGGATCAACAATTGTGTGGTCTCCAGGTACAGAAGGCAAGAGGGTTTCTTCAATGGAATTGAAAGACACTGGAAACTTGGTTTTGCTAGGGAAGGATAGTAGCGTGATTTGGCAGAGTTTCAGCCACCCAACAGATACCTTGTTGCCAATGCAGTACTTCATTGAGGGAATGAAGCTTATCAGTGAACCTGGTCCTAACAACTTGACCTATGTTCTTCAGATTGAATCTGGCAATGCCATTCTCTCCACTGGTTTACAAACTCCACAGCCTTATTGGTCTATGAAGGAGGATAGCCGCAAAAAACTCATCCACAAAAGTGGTGATGTGGTGGCTTCAGCTACCCTTAATGCAAGCTCCTGGAGCTTTTATGATGAAACTAAATCCTTATTGTGGCAATTTGATTTTTCCGAAGAATCAGATTCAAATGGAACTTGGAGTTTAGTTTTGGGGAGTGACGGCATCATCACATTCTCTATTCTCCAAACTGGACTTGCCTCACCAAGAAGAATACCACAAGATTTTTGCAGCACCCCAGAACCTTGTGATCCCTATTACATATGCAGTGGTGAAAAGAAATGCACCTGCCCTTCTGTTCTTAGCTCTAGTCCTAATTGCAAACCCGGGTTTGACTCTCCTTGCAGCTCAAAAGGCACCATAGAGCTCCTCAAAGCTGATGATCGACTCAATTACTTTGCACTTGGGTTTGTACCACCCTCTTCAAAGACTGATTTAATTGGGTGCAAAACCTCTTGCAGTACAAAATGCTCATGCCTTGCTATGTTCTTCAACACTAGTTCAGGGAACTGTTTCCTATTGGACTGGATTGGAAGCTTTGAGAAATCTGTCGAAGATTCTGGTTTGGTGTCCTACATTAAGGTGGTATCTAGTGATGGAGACACTGGACACAGTGGAAGCAGCACTGTGCAGGCAATAGTTGTTGTGATCATTGTGATAGCAACATTGGTTATCATTTCTGTTATGCTGTTTGTGGCACATAGATGTTTCAGGAAAAAGGAAGATTTGCCTGAGTCTCCTGAAGAGAATTCAGAAGATGACGATTTCTTGGAGGGTTTAACCGGCATGCCAATCCGTTACAGCTACAATGATCTAAAAACTGCAACAAGTAACTTCTCAGTGAAGCTAGGAGAAGGGGGTTTTGGATCAGTTTACAAAGGAGTTGTACCGGATGGTACTCAACTAGCAGTGAAGAAGTTGGAAGGAATTGGCCAAGGGAAGAAAGAGTTCAGGGTTGAAGTTAGCATTATAGGGAGCATTCATCACCACCATTTAGTAAGGCTCAAAGGGTTCTGTGCTGAAGGGTCTCATAGACTTCTTGCTTATGAGGAAACTTTTGAGAAATCCCATTTCCCATCTTTTGCTTTTAAGATGATGGAAGAAGGGAGGGTAAGAGAGATTGTTGACTCAAAGCTGGAAACTAATGAAAATGATGAGAGGGTTGAAACTGCTGTGAAAGTTGCATTGTGGTGCATACAAGAAGACATGTCTTTGAGGCCTTCTATGAGCAAAGTTGTCCAAATGCTAGAGGGTCTATGCACTGTTTCTAAGCCACCAAGTTGTTCTGTCCCTGGTTCTCAGTTTTACCCAAACAGTGATGCCGGCACTTCTTCAGGACCATCAGATTGTAACAGTGAAGCCAATCTTTCTGCTGTTAGGCTTTCAGGGCCAAGATAA


Promoter Sequence:
>Vu_01841::LG1:21826984-21828984(+)
TAGGGCAGTTAAAATTAGTACAATTCAATTTAAAATTAGTATAGTTAGTAGTTCAGTTTAGTTTATATTGTAGTTTAATACAATTTAGTATAGTTCAGTTCAGTCCAGTTTAATAAAACAAAAAACAATTCAGTTCAGTTTATTTGAACTGTTTTACAGTTCAGTTCAGACAAATTAGTTTTACAGTTCAGTTCTATTTGCTCATCCCTATATGTAATTAACCTACTTCTCTTACCTAAAGATAACATGCTTAACCAAATAAAACAACTTAACGTCAAACAAAAGGTTTCAAAGTAAGGCTTCAACCTCAACCGTGAACATCTTTACTTTATCATATTACTATTACATTCTTATTTGAAAGTTGATTTAGACAAATAGAATATAAAACCCCATAAACTCAAAGATGAAGAAAAGAAACATGACCAACTATTAGATAAAGAAGAACTTACCTATATCAAGATTTATAGATTTTAATTGAACTATCTTAATTTACTTTTTCCTATCCGCTCATATATAAAACATGATCATAAAAAATAAATAATCAATTTTAAATCTTAGAGAAGTCAAGTGATAAATAAGTTTAGAAACATAAGATTTTAAAATAAATGAATGATGTATTATTTTAAATTTGTTTATAGACGTTTTTAAAATGGTATATTCATTTCTCATTTCATATAAATTGAAATCTTTCATCCTAAATAAAATGGGTCTTATCGATTACATTTAAATAATAAAAAAATATATATCAGAACCATTTAAAATGAATTCACCATCACCAATTTTTCACGCTAATTATTTATATATAATTCTGTAATTCATGTTTATAGTTACTCATTGCCATATCCAAACAAAAATCCTCACCAAGAAACATTCTTACTTTAATTTAAAATTCGTGAGTATATGTAACTATTTATTAATTAATTTAAGCACTAAATTTCAATTTGAATTGTAAATATACTATCATATATAAGAACTAAGAGGACCAATTAACTCTTCTAAACCTCAAGACTAGTTAACTTGTTCCCTTGTATAAAACTTAATACATAGTGTTAATTATTTTTAGATTAAAATACTCTTAATTAAAATCAGAAGGTTGTATCGGCCAAAGATAAAAACTTTTGCACATGGCAACGCCAGTAAACCAGTAAGGTAAAGACATGAAATAACTTGGTCTGTATCAAAAGTCTACAACACCTTTTACACGTATATATCGTATTTAAGGTTGATCAATTTGGTCCACCCATTTTTTCTCCACAAACAGGTTAAAAGCAAAACACAGATCGATCCATCGAATTGATTTGACTCAATTCACAAAAAGCTTCCCCAAGTGGCAAATTTTATCAGCTGTATGCAAAGCCACAGTCATAATGAACTCATAGCAGACACATTATATCATTTTATTCATAATATATTGTACTTCTCCATTCATTTTGCTTCAACTGATGCACAGTTTAGCATTGATTATGATTTCTTTCTAATTCATTTCCTACTTCCCTACCACCTTCTGCTATTTCTCTTCTTTAACTTATCACAATCAAACCAAATAAATGCACTGCCAACTACTTTTTATCACCCATTTACACTCTTCTTATTGGTCTTCCTTCAAAGAGGTCTTTCATCCCATCTTCTAGCTTCTGTTTATTCTTCTTCCATTCCACAAGGTTTTAATAAAGAACGGAATTCAGCTGCCTGAAGCGTGGCTGAGTCGGTCAAGTGTGAACAGAGGAATTTTTTGCCTTCTCTTTGTTCAGATACTTTTTATTTGCATCTTTTTCTGTGCCATATTTCTTTTTCACCATGCAGTCAAAGAAGAAAAATCAGCGTAGATACTTAGAAAGTTCCTTTCATTGTATAAACTTGTGTGATTGTAAGGATGTTATTGTTGTGGACTCTTTCAACCCTCTTCTCTCTTGTTAATGGATTCCTAGTTTCTTGCTTTTCTTTTTTTCCTTCATGAGATTTAATTTCCCCAAAGGGTAAAGGGTGTTGAAGGAAAACCA


Gene Sequence:
>Vu_01841(+)
ATGGGAAAACTGTGGTCTCTCTTCAGTGTTATGGATACCCTTTTGTTGTGTGTCCTTCTTTCGTCTGAAGTAGTTTTGACTAGTACTCCTAGGTTTGGCAAAACCCATCCGCCGATTGAAGGTTCTCAAATGACATGGATTGACAAGAACGGCATTTTTCTCGTTTCATACAAAGGAGAATTTGGATTTGGCTTTGTCACCACTTCAAATGACATCACATTGTTTCGACTGGCAATTGTCCACATGGGCAAAAAGACAGTGGTTTGGGTAGCAAATAGGGATCTTCCTGTTTCCAACTCTGATAAATTTGTGTTTGATGAGAAGGGAAATATCTACTTGCTTAAAGGATCAACAATTGTGTGGTCTCCAGGTACAGAAGGCAAGAGGGTTTCTTCAATGGAATTGAAAGACACTGGAAACTTGGTTTTGCTAGGGAAGGATAGTAGCGTGATTTGGCAGAGTTTCAGCCACCCAACAGATACCTTGTTGCCAATGCAGTACTTCATTGAGGGAATGAAGCTTATCAGTGAACCTGGTCCTAACAACTTGACCTATGTTCTTCAGATTGAATCTGGCAATGCCATTCTCTCCACTGGTTTACAAACTCCACAGCCTTATTGGTCTATGAAGGAGGATAGCCGCAAAAAACTCATCCACAAAAGTGGTGATGTGGTGGCTTCAGCTACCCTTAATGCAAGCTCCTGGAGCTTTTATGATGAAACTAAATCCTTATTGTGGCAATTTGATTTTTCCGAAGAATCAGATTCAAATGGAACTTGGAGTTTAGTTTTGGGGAGTGACGGCATCATCACATTCTCTATTCTCCAAACTGGACTTGCCTCACCAAGAAGAATACCACAAGATTTTTGCAGCACCCCAGAACCTTGTGATCCCTATTACATATGCAGTGGTGAAAAGAAATGCACCTGCCCTTCTGTTCTTAGCTCTAGTCCTAATTGCAAACCCGGGTTTGACTCTCCTTGCAGCTCAAAAGGCACCATAGAGCTCCTCAAAGCTGATGATCGACTCAATTACTTTGCACTTGGGTTTGTACCACCCTCTTCAAAGACTGATTTAATTGGGTGCAAAACCTCTTGCAGTACAAAATGCTCATGCCTTGCTATGTTCTTCAACACTAGTTCAGGGAACTGTTTCCTATTGGACTGGATTGGAAGCTTTGAGAAATCTGTCGAAGATTCTGGTTTGGTGTCCTACATTAAGGTGGTATCTAGTGATGGAGACACTGGACACAGTGGAAGCAGCACTGTGCAGGCAATAGTTGTTGTGATCATTGTGATAGCAACATTGGTTATCATTTCTGTTATGCTGTTTGTGGCACATAGATGTTTCAGGAAAAAGGAAGATTTGCCTGAGTCTCCTGAAGAGAATTCAGAAGATGACGATTTCTTGGAGGGTTTAACCGGCATGCCAATCCGTTACAGCTACAATGATCTAAAAACTGCAACAAGTAACTTCTCAGTGAAGCTAGGAGAAGGGGGTTTTGGATCAGTTTACAAAGGAGTTGTACCGGATGGTACTCAACTAGCAGTGAAGAAGTTGGAAGGAATTGGCCAAGGGAAGAAAGAGTTCAGGGTTGAAGTTAGCATTATAGGGAGCATTCATCACCACCATTTAGTAAGGCTCAAAGGGTTCTGTGCTGAAGGGTCTCATAGACTTCTTGCTTATGAGTACATGGCCAATGGATCATTGGATAAATGGATATTCAACAATCACAGAGATGAATTTGTGTTGGATTGGGATACAAGGTATAACATAGCACTTGGAACAGCAAAAGGACTTGCTTACCTCCATGAAGATTGTGACTCAAAGATTATCCATTGTGACATCAAACCAGAAAATGTGCTTCTAGATGATAACTTCCTGGTCAAGGTTTCTGATTTTGGCTTAGCTAAGCTCATGACACGGGAACAAAGCCATGTTTTCACAACACTTAGAGGCACAAGAGGGTATCTTGCACCTGAATGGATCACAAACTGTCCCATATCAGAGAAAAGTGACGTTTATAGCTATGGCATGGTGTTACTAGAGATCATTGGAGGGAGGAAAAACTATGATCAAAGGGAAACTTTTGAGAAATCCCATTTCCCATCTTTTGCTTTTAAGATGATGGAAGAAGGGAGGGTAAGAGAGATTGTTGACTCAAAGCTGGAAACTAATGAAAATGATGAGAGGGTTGAAACTGCTGTGAAAGTTGCATTGTGGTGCATACAAGAAGACATGTCTTTGAGGCCTTCTATGAGCAAAGTTGTCCAAATGCTAGAGGGTCTATGCACTGTTTCTAAGCCACCAAGTTGTTCTGTCCCTGGTTCTCAGTTTTACCCAAACAGTGATGCCGGCACTTCTTCAGGACCATCAGATTGTAACAGTGAAGCCAATCTTTCTGCTGTTAGGCTTTCAGGGCCAAGATAA