Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_01746 LG1 20629429 20630433 LRR receptor-like serine/threonine-protein kinase GSO1
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/C 20629478 missense_variant p.Val17Ala
G/C 20629558 missense_variant p.Gly44Arg
G/C 20629565 missense_variant p.Ser46Thr
T/G 20629592 missense_variant p.Ile55Ser
T/G 20629599 missense_variant p.Ser57Arg
G/A 20629600 missense_variant p.Asp58Asn
G/A,* 20629604 missense_variant p.Gly59Glu
C/T 20629611 synonymous_variant p.Asp61Asp
T/C 20629616 missense_variant p.Leu63Ser
C/T 20629639 missense_variant p.His71Tyr
A/T 20629674 missense_variant p.Leu82Phe
T/C 20629681 synonymous_variant p.Leu85Leu
A/G 20629684 missense_variant p.Asn86Asp
A/G 20629690 missense_variant p.Lys88Glu
A/G 20629691 missense_variant p.Lys88Arg
G/A 20629708 missense_variant p.Ala94Thr
G/C 20629728 synonymous_variant p.Leu100Leu
G/A 20629736 missense_variant p.Arg103His
A/G 20629745 missense_variant p.His106Arg
T/C 20629746 synonymous_variant p.His106His
C/G 20629759 missense_variant p.Pro111Ala
A/T 20629774 missense_variant p.Ser116Cys
T/G 20629776 missense_variant p.Ser116Arg
G/A 20629779 synonymous_variant p.Gln117Gln
G/T 20629781 missense_variant p.Cys118Phe
A/G 20629783 missense_variant p.Ile119Val
C/T 20629797 synonymous_variant p.Thr123Thr
C/T 20629800 synonymous_variant p.Leu124Leu
C/A 20629801 missense_variant p.Arg125Ser
T/C 20629821 synonymous_variant p.Leu131Leu
G/T 20629826 missense_variant p.Trp133Leu
G/C 20629912 missense_variant p.Glu162Gln
T/G 20629957 missense_variant p.Phe177Val
C/T 20629962 synonymous_variant p.Leu178Leu
C/T 20629969 missense_variant p.Arg181Cys
G/A 20629970 missense_variant p.Arg181His
C/A 20629973 missense_variant p.Ala182Asp
T/C 20630004 synonymous_variant p.Leu192Leu
A/G 20630023 missense_variant p.Lys199Glu
A/C 20630024 missense_variant p.Lys199Thr
A/C 20630025 missense_variant p.Lys199Asn
G/C 20630029 missense_variant p.Glu201Gln
T/G 20630032 missense_variant p.Phe202Val
A/G 20630038 missense_variant p.Ser204Gly
G/A 20630039 missense_variant p.Ser204Asn
G/C 20630047 missense_variant p.Ala207Pro
C/T 20630048 missense_variant p.Ala207Val
A/C 20630049 synonymous_variant p.Ala207Ala
T/C 20630058 synonymous_variant p.Phe210Phe
A/G 20630059 missense_variant p.Asn211Asp
C/G 20630061 missense_variant p.Asn211Lys
A/T 20630125 missense_variant p.Ser233Cys
C/T 20630131 synonymous_variant p.Leu235Leu
C/A 20630140 missense_variant p.His238Asn
C/T 20630143 synonymous_variant p.Leu239Leu
G/T 20630151 missense_variant p.Lys241Asn
C/T 20630154 synonymous_variant p.Asp242Asp
G/A 20630176 missense_variant p.Glu250Lys
A/G 20630185 missense_variant p.Ile253Val
G/T 20630206 missense_variant p.Asp260Tyr
G/A 20630221 missense_variant p.Asp265Asn
G/A 20630353 missense_variant p.Gly309Arg

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_01746.1
MHALLNFKQRVTDSSGVLSSWTIEVDCCDWKGVMCSNITSRVTGISLPCSTTLPIYSDGEDKLHCLTGSIHLSLLLVELEFLDYLNLKNNDFLALQFDYLHNRNCHNLSIPTSSHSQCINSSTLRHLDLSLNWNLAINNLKWLPYISSLEYLNLRAIDLSKESNWLQLVTMLPSLSFLNMRACRLKDLSLSLQYANFTKLEFLSLSANEFNSELPKWLFNLSSTIYTLDLSSSSLIGHLPKDLLNLRELEDLIMEDNNFDGPIPDWLGDFEHLETLVLGVNNFSGSIPTNLGNLSTLTTLDVASNPLTGVVSEKNFAKLSKLKELDIYSFHVNL*


CDS Sequence:
>Vu_01746.1
ATGCACGCTCTCTTAAACTTCAAGCAAAGAGTGACAGATTCCTCAGGTGTCCTTTCCTCATGGACAATTGAAGTAGATTGTTGTGATTGGAAAGGAGTGATGTGTAGCAACATCACAAGTAGAGTCACTGGAATCAGTCTCCCATGTTCTACAACTCTTCCAATTTACAGTGACGGAGAAGACAAATTACATTGCCTTACAGGTTCCATTCACCTCTCCTTGTTGTTAGTGGAGTTGGAATTTTTAGATTACTTGAATTTGAAAAACAATGACTTCTTAGCATTACAATTTGATTATCTGCATAATCGTAATTGTCATAATCTATCTATACCTACTTCTTCTCATAGTCAGTGTATCAACTCTTCAACCCTCCGTCATCTTGATTTATCACTTAACTGGAATCTTGCCATCAATAACCTTAAATGGCTTCCCTACATTTCCTCACTGGAATATCTTAACCTCCGTGCCATTGATCTTAGCAAGGAAAGTAATTGGCTTCAATTAGTGACCATGCTTCCATCACTTTCATTCCTCAATATGCGTGCTTGTCGACTTAAAGACTTGAGTTTGTCTCTTCAGTATGCTAATTTTACTAAACTCGAATTTCTTAGTCTTTCTGCAAATGAATTTAACTCAGAGTTGCCTAAGTGGTTATTCAATCTTAGTTCCACTATCTATACTTTAGACCTTAGCTCAAGTTCTCTAATAGGACATCTACCTAAGGACTTGTTAAATCTTCGAGAACTAGAAGACCTGATTATGGAAGACAATAACTTTGATGGACCCATTCCAGATTGGTTAGGTGATTTCGAACATTTAGAAACTCTTGTTCTTGGAGTAAACAACTTTTCAGGATCTATTCCCACAAACTTGGGAAATCTATCAACCTTGACTACCTTGGACGTTGCCTCAAATCCATTGACAGGAGTTGTGTCTGAGAAAAATTTTGCTAAATTGTCGAAATTAAAGGAACTGGACATATACTCATTCCACGTTAATCTTTGA


Promoter Sequence:
>Vu_01746::LG1:20627429-20629429(+)
GCTTGAGATTAATGTAAATTCTATGAAGTTTATGTAATTTGTGCTTATCAGTTCACTTTGAAACCATTTCATATGATTGTGCTTATTAGTTGACAGTTCATTACAAAGAGTATTTTGGCCAAAAATTTCAATCAATACTTTGAATTACTTCTTTTCCAAAAGTTACAAACAATACAAACTTTTATAGTCAAAATAACTTTGGTTCATTGCATCCTAAGTACATTCCATCATAAGTACAATGAAATCATTCCTATGAACAAAAAAACACTATTGTAAGTACAATAATGTTCACCACAACAAGAACACAGACAATCCCTAACAAGAACACATCCACCTTCCATTGCTTCTCTGTTCAACAAAGACTCAGACTTGCCTTCACACTTTGCACTCGTTTCCGTTTCAACAACCCCATGATCTGCACACCATGTGAAATAATTGCAACCACCGTCTTCACCACCATTCTGTGACAAGAAAACACCAATCAGGGCACCCTCGAACTCAAAATAAGAACAACGAAAAAACCACGAAAAAACCTTACCTTGAACTTAGGGCAGCCCCAAAATTGCTTGCCTCTGTTCTTAACTGTTCTTGTAGTTCTGACAACACATTTCATCCCACAATAGCAAAACGGACCACCATTGCTACATCCTCCTCGAGCACCACCACAGACCACATTACTGTCTTGCTTCCGCCACCCACTGCATGACGAAGACGAACAGGGATGCATCTTCAAGCACAACTTGGATTAAACCCTAAATCCCCAAAATGATACCCTAATTTATGAAATGGATTGAACTTTGGACGAACTCTAGAAGAACTCAGAAGAATCTCAATCCCTAATTCGATAAAATAACAATCTCAATCCCAATTTTGGTTTAAAACTTTCATTTTCTTTTTATTTAAAAAATTGAATTATCGATGTCAGTTAAGAAACTGACTTCAGTCAGCCACGTCAGTTAAGAAACTGACTACAGCGTGTCACATCAAACACACACTAACGCCGTTGGAGACAATTTAACGGAAATGATCCAATTGTTGCAATTTTCATAAATTTGGGACCCAATTGAGATTTTCATAAACAACGGGACTAAATTGAGATTTCACGCGAAAATAAGGACTTCGTGAATGATTAAACATTTTTTCTTTTTAAATTTAATTTAATGTTTAAAAATACATGAAACTGTGAACTTTTTTTCTTCTTAATAAGATATAATAGGAATACAGGTTTTATAACTTTATGTGAATACTTTTTTATCATACCAACACAATCAAGTTTTAAGAATTTTAATGCAGTAAATTTTAATTTTGTTTTTCACAATAATTTATTTGATATTTTTAATTAAAATATTAGATAGATTCATAAAATTTATTAAAACATATATTAATAAGTTTTTGAAATTCTTAATTTATATTCTAAGTTTTAATAATTCAATCAATAAAAGTTCGTATTCCTAATTGATTTGTTAACTTTGAGGTATTATATTGGTAAATGAAAAGAATGAGTGCATTGACTATTCTATTTATTACAATAAGAGTAAGTTTATTATATTATATTCTCTATAAATTAAATATTTTTAGTTTGAAAATATATATGTGTAATTATTAATCCTAAATTGGTAATATATATTTTAAGTAACGATTGAATACGATCGATGCATAATTTGTTTGATTTGAATAGGTCTTTCAAAATTCGTGGTTTGTCAAGTAATGTTACGATCGGTTTCTCTAGTCAAGTCGTTGCAATTAACTATACTTTCTTGGTTAACACAAAATTTCATTAAATCTTAATTACGGGATGTGAAACTTTTGTATAGACTCCAATTACTATAAATAGAGTTTCTCTCCATTATATTCAAGTCATCCATCGTCCCCTTCATTTCTTTTGAAAATCATGAGTAAATTTCTCTCTCAAAATGCAATCATTTTTGTATGGTTGCTATGCGGAATCATCTTCAAAACTGCCTTTTGCAGCTTCAATATCCGTTGCAACCAACGAGACA


Gene Sequence:
>Vu_01746(+)
ATGCACGCTCTCTTAAACTTCAAGCAAAGAGTGACAGATTCCTCAGGTGTCCTTTCCTCATGGACAATTGAAGTAGATTGTTGTGATTGGAAAGGAGTGATGTGTAGCAACATCACAAGTAGAGTCACTGGAATCAGTCTCCCATGTTCTACAACTCTTCCAATTTACAGTGACGGAGAAGACAAATTACATTGCCTTACAGGTTCCATTCACCTCTCCTTGTTGTTAGTGGAGTTGGAATTTTTAGATTACTTGAATTTGAAAAACAATGACTTCTTAGCATTACAATTTGATTATCTGCATAATCGTAATTGTCATAATCTATCTATACCTACTTCTTCTCATAGTCAGTGTATCAACTCTTCAACCCTCCGTCATCTTGATTTATCACTTAACTGGAATCTTGCCATCAATAACCTTAAATGGCTTCCCTACATTTCCTCACTGGAATATCTTAACCTCCGTGCCATTGATCTTAGCAAGGAAAGTAATTGGCTTCAATTAGTGACCATGCTTCCATCACTTTCATTCCTCAATATGCGTGCTTGTCGACTTAAAGACTTGAGTTTGTCTCTTCAGTATGCTAATTTTACTAAACTCGAATTTCTTAGTCTTTCTGCAAATGAATTTAACTCAGAGTTGCCTAAGTGGTTATTCAATCTTAGTTCCACTATCTATACTTTAGACCTTAGCTCAAGTTCTCTAATAGGACATCTACCTAAGGACTTGTTAAATCTTCGAGAACTAGAAGACCTGATTATGGAAGACAATAACTTTGATGGACCCATTCCAGATTGGTTAGGTGATTTCGAACATTTAGAAACTCTTGTTCTTGGAGTAAACAACTTTTCAGGATCTATTCCCACAAACTTGGGAAATCTATCAACCTTGACTACCTTGGACGTTGCCTCAAATCCATTGACAGGAGTTGTGTCTGAGAAAAATTTTGCTAAATTGTCGAAATTAAAGGAACTGGACATATACTCATTCCACGTTAATCTTTGA