Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_01529 LG1 17780078 17782749 PREDICTED: NAC domain-containing protein 35-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated
Cellular Component   located in   nucleus
Molecular Function   enables   DNA-binding transcription factor activity, DNA binding
SNP Position Effect Amino acid change
G/A 17780267 intron_variant
T/C 17780688 intron_variant
C/A 17780690 intron_variant
A/T 17780693 intron_variant
C/A 17780797 intron_variant
A/G 17780860 intron_variant
T/C 17780911 intron_variant
T/C 17781281 missense_variant p.Gln232Arg
T/C 17781310 synonymous_variant p.Gln222Gln
A/G 17781370 synonymous_variant p.Asp202Asp
C/T 17781499 synonymous_variant p.Lys159Lys
A/T 17781518 missense_variant p.Leu153His
A/T,* 17781653 intron_variant
T/G,* 17781662 intron_variant
T/G,* 17781732 intron_variant
G/T,* 17781736 intron_variant
C/G 17782003 intron_variant
T/C 17782023 intron_variant
C/T 17782024 intron_variant
G/A 17782062 intron_variant
G/*,A 17782086 intron_variant
A/C 17782091 intron_variant
C/A 17782093 intron_variant
T/A 17782094 intron_variant
T/A 17782095 intron_variant
T/*,C 17782103 intron_variant
T/A,* 17782121 intron_variant
C/T 17782257 intron_variant
A/C 17782259 intron_variant
C/T 17782332 missense_variant p.Glu140Lys
T/A 17782356 missense_variant p.Thr132Ser
A/G 17782378 synonymous_variant p.Val124Val
G/A 17782396 synonymous_variant p.Ser118Ser
G/T 17782471 missense_variant p.Phe93Leu
C/T 17782558 synonymous_variant p.Pro64Pro
C/G 17782567 synonymous_variant p.Ala61Ala
G/A 17782568 missense_variant p.Ala61Val
G/A 17782585 synonymous_variant p.Phe55Phe
C/T 17782631 missense_variant p.Gly40Asp
G/A 17782633 synonymous_variant p.Asn39Asn
C/T 17782648 synonymous_variant p.Arg34Arg
A/G 17782722 missense_variant p.Phe10Leu
T/G 17782723 synonymous_variant p.Leu9Leu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_01529.1
MEDRAQDALFPGCRFYPSEEVLLGYYLTKKNENREQRFNGSDLIKELNLYDHDPFELPDAACFPYGYRGRKKHWFCYTVKETKSPSRKVKSGFWLRKGRVRDIRDNGGIGNAVLGTRSRFVFYVGNSLKKATRTDWILYEYALVDQILSSFVLCRVVNKPHHKNSPSEIGRSCCAEESAAVVVRHIGVQHDGCVGGDDVCDDGFVNREIEAAENPIRRGGEQDHAATVSVAQGSQPVQERLSGLPCDGALYIEAVIPQQHMLSILEEDFIELNDIV*


CDS Sequence:
>Vu_01529.1
ATGGAAGACCGAGCGCAAGATGCACTATTCCCTGGTTGCCGGTTCTACCCGTCCGAAGAGGTTCTACTCGGCTACTACTTAACCAAGAAGAACGAGAACCGGGAGCAGAGGTTCAACGGTTCTGATTTGATCAAGGAACTGAACCTGTACGATCATGACCCCTTCGAATTACCGGACGCTGCGTGCTTCCCGTACGGTTACCGAGGGAGGAAGAAGCATTGGTTCTGTTACACCGTTAAAGAGACCAAAAGCCCAAGCAGAAAGGTCAAAAGCGGGTTCTGGCTCCGGAAGGGAAGGGTTCGAGATATTCGCGATAACGGTGGGATTGGGAACGCTGTTTTAGGCACCAGGTCCCGTTTCGTTTTCTACGTTGGGAATTCGCTGAAAAAAGCTACCAGAACGGATTGGATTTTGTACGAGTACGCATTGGTTGACCAAATTCTGTCTTCGTTTGTGCTTTGTCGTGTGGTGAATAAGCCTCATCATAAGAATAGTCCATCTGAAATTGGTCGCAGTTGTTGTGCTGAAGAGAGTGCAGCTGTGGTGGTGCGACACATCGGTGTTCAACATGATGGATGTGTTGGAGGTGATGACGTTTGTGATGATGGATTTGTTAATAGAGAGATTGAGGCCGCTGAGAATCCAATTAGGCGTGGTGGTGAACAAGATCATGCTGCAACTGTTTCAGTTGCTCAGGGAAGTCAGCCGGTTCAGGAAAGGCTTTCTGGACTTCCCTGTGACGGTGCATTGTACATTGAAGCTGTGATACCTCAGCAACACATGCTTTCCATTCTAGAGGAGGATTTCATAGAATTGAATGATATTGTATGA


Promoter Sequence:
>Vu_01529::LG1:17782749-17784749(-)
TAAAACTTTGAATGAATGGTTGGATGAGTAAATCTAATGCTTAGTGTTTGTTGTTGGACCATTTAAGACTTGTTTAGCTAATTAGTTCACTGAAATCTAGTTGGTATCAAATGGTTTAGATGCACTTTTAATATATGTATGTTTAAAAGGCTATATAGATTTTGTAATAGAGTTATTAATGTCTTGCAAATGGAAATGATAAAAGTGTATTCGGTTTAATTATGTAGTGAAGGGGATTCCATGAGGAAAACCTTTGTGTTGTGTTTCTGTTATGTATTATTGTAGGAACTTTGAAATAGAGGAATGTCCGACTCTAATGACTATCCAATCTCAAGTAGAAACAAGTGGTTATGTTGTGAAGAGTAGAAGAAAATCTTTTGCCTCAAGTCAGTTTGACTATGGGTGTTTGACAGACTAACTTTGTATGGTAGTTTGGATGATATGTTGTTTCACCCCATTTGTGCAGGTCCTCCAATAGTTCGACACTAATACATATATCTAAATAGTCAAGTCTAGAGTTTATATATATATAAACTCTAGATATTGAAATTATGATGTTTATGATTTGAATTAATGATATGTTTGATTCTTTTAAAATTACTTACCTTGTTGTTTATGTTTTGTTTAATCATTCTCCTTGATAAGAATCACTTGGTTGGTAACAAAGGAAGATGTTTTAGTTGAACGGGTGATGGGTGCGAAAAATATTGATATGTAGATAGTTAGAATATTATTAGTTTGAATTATGATATTTTGATGGATCTTTAGTTCATGTTTAATTAATATTTGAAATAAAATATTTTGTATATAAAGTTTAAATTATGATTATATTTTTAGATATCTATAATAATATTTTATATGTTTTTTTAATTATCTAATCATGTTTATTAAATATATGATAATTTGATAATAGTATTAAAATTATAAATTTGGAATGTTACATATATCACTTCAGTTAAGCATTCGCTTTATTAATCTTAGCATTATATTAATATTTTTTGGGTACAATTATTAATTTTATACAACAGTGTGAAATCTACATATTCAAAACAAATAACTCATTTTACAAATATAAAAAAGCAAAGAACTTTCACTATTACTTTTAGGTTCTGATTTCAAAATTCTAAAAAATATAATAAAAATTTTCATACTAATAAAATAATTATGAAATCTCCTAGCTGTATTATTTTGCATTTCTGTATCACAATAAATATAAATATCTAAACTAGTTAAAGTAATGATATAAATGGAAAAAAAAATAACGCTGCTCAACTTTAACGGCGGGCATATGAATAAAATAATCTTGTAAAAATTTGAAATTAAAATTTTTGAAAGTTTTTTATTTTCTTGTCTAAGCACGTGTGTTCTACGAACTGTGAGTAAAGAACTAAAAACAAACGATTTTATTCGAACTTCCTTTGAAATTAGATTGGCAATACCGGTCAACATATATAATTAACATTAATTATTAATCATTAACCATTAATTAATAAAATTCTCAGACTTAATTAAGTGAATATGCCTTGATACGGCAACGTAGCGCAAAGCGCTACGCAATGTCGCAGAACAAGCGGCATTATCCGTACGTATGACACGTGTTGAACCATCATTGGCTATTTCTCGACTCCGTCATGCCCAGGCCGCAGCAGATTCCTCCCCAAGGTCAAAATAAAGTGAAAACCAGGAAGTCTGTGACCAGGTGCTTCGCAGCCGCACGACGCATGATGGTTGAACCACTCATGAGCCACTGATATGAGGCTGCTGCGACTAATGATACCATCACCCGGCTCCACCGTGGGCAAATGAAATGGCGTCGTCACAGCCAATCAAGAGGCGCCATGTCCCACACGCACAGTCACCGGCGGGAGAGTGGCAAAGCTTGCATAACACGATTCTCGTTCTCACTACAAAACCACACTCGCTCTCTTTTTCTTCGTTCTTTCTCCCATTTCCTAAATCCTCCTTAAACCCTAACACTCTCAATCTCAATCTCATGATTA


Gene Sequence:
>Vu_01529(-)
ATGGAAGACCGAGCGCAAGATGCACTATTCCCTGGTTGCCGGTTCTACCCGTCCGAAGAGGTTCTACTCGGCTACTACTTAACCAAGAAGAACGAGAACCGGGAGCAGAGGTTCAACGGTTCTGATTTGATCAAGGAACTGAACCTGTACGATCATGACCCCTTCGAATTACCGGACGCTGCGTGCTTCCCGTACGGTTACCGAGGGAGGAAGAAGCATTGGTTCTGTTACACCGTTAAAGAGACCAAAAGCCCAAGCAGAAAGGTCAAAAGCGGGTTCTGGCTCCGGAAGGGAAGGGTTCGAGATATTCGCGATAACGGTGGGATTGGGAACGCTGTTTTAGGCACCAGGTCCCGTTTCGTTTTCTACGTTGGGAATTCGCTGAAAAAAGCTACCAGAACGGATTGGATTTTGTACGAGTACGCATTGGTTGACCAAATTCTGGTACGGTTTCACGATTAATTCAAATCACACCATTTCTTGAAATAGTTAGTTTGCTTTTGGAAGAGCAATTGAAAACTGATTTTAATGCAATTAGATTTATTTTAGCTGATTTTATTCTTGCATTTACTTAAAAATAAATCTAGTATTGGAAGTTACTTAAATTATTTTAGCTGTATAAATTAGAACATGTAACAAATTTCTTAATTTAACAAGTTAAATCAAGTTATGTCAGGAGATAAAATACCACCTTACTGAACAACACTCTGCGCTCATCTTGAAAAGAAGAGAAAAGCAAGAACAGCGGATGCGCAGTAGAGCTCTTCAAAAAGAAGAGCTCTGATACCATCTCAACGTTTCTTGATTGTGTCTGCATGGTCTTGGCACACTCCATATGCATGGTGTTGTTCGCTTCAGTGTAAACAATAGGAGACATAAAGGAAAGAAACAGAACAGAGAAAACCAAGAGCATGAAAGGGAAAAACATGTATTATTGAACTGAAAAGAGAGTATTGTCTTAACGTACGAAAGGGGAGGAAAAGGGATATCTATATCTATATATATATATATATCTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAGGAGAGTGTTGTCTGATTGATTGATTATACTGATACTTCAACGTGATTGTGATCATCTAAGGTGAGTCCAAACAAGCCATTGATTAATGTAACGAATTTGATTTTTGCGTGTGCAGTCTTCGTTTGTGCTTTGTCGTGTGGTGAATAAGCCTCATCATAAGAATAGTCCATCTGAAATTGGTCGCAGTTGTTGTGCTGAAGAGAGTGCAGCTGTGGTGGTGCGACACATCGGTGTTCAACATGATGGATGTGTTGGAGGTGATGACGTTTGTGATGATGGATTTGTTAATAGAGAGATTGAGGCCGCTGAGAATCCAATTAGGCGTGGTGGTGAACAAGATCATGCTGCAACTGTTTCAGTTGCTCAGGGAAGTCAGCCGGTGAGAAATTAACACTGATTTGTTAAATAATACCTTAGTAAGAAATTATTGTTTTTGCTTATTTATGCTTCATTTTTGTTACCATGCATCTAAGAAAGTAAATTTAGTGGCTTATGAGGTGAGGTTTGACTTATATACTATAATTTGATAATATGTGAGATTTTCAACATATTCTTTCATGTCCAGAACTAAGTATGGGACTAGATATTTGTGGGTGACAGATAGTGTTCTCATAGCGAGTGACATGATAGTTCTCAACAAACTTTGCTAAAGTAGACTTTAATACAATCTTAGAAAGTGCATTTAAGTGTACTTCAACTTTCCAAACTGACTTATAAGATAAGGTTTGGATCCATATATATAGTATAAGTTTTTTCTTTTTTTAGTTGATGTAGGATCTCCAGTAATGCAACACTGTGTATGACTTACTACTAGGAAGGCTTTTTGTGTTGGTAGTTTTTGTTTGTAGAGCTAGATAGTTTCACTGGATTCCTTCGAATTATTTTTGTTTCGTCGGAGTTGTCAGTCGCGAACATCAGCAGTTGCCTGAAAAGTGCAGTCAGAATTAGGGCTATTAGCATAGGGAGTCACTCAAAAAATTTGTTGCAACTACTATTTTTAAAAGAAAAACTGAAAATTTTCAACTCATTCATGTGATGGTTCTTTTCAGATGGCATTTGCATCCATATTTTACTATTAATAGAACTTTTTCTATTAGAGGTAACATCTTAAGTTTTTAATTTTTGTCACAGCATGTCGCTAAAACTACAAATAGGTCACTATGCTCTTGGATATTCGAAATACATACGTGTATTTTGTTTCATTTATGTCTTCGTAAAAGTTGAGCTGTCTACTCTTCTAAAGGTGGAGAACACATGTAATGATGGTTAACAAAAAGCTCTGCATGTGTCAATTGATAGTTACGCTATTACTTTAAACTTGTCCTATTTTTTTATTCATTCGTTCAATTTTAGCATATTCTCCCTTGTACCTTTTCTTTCTATTTATAGTGGAGAATTTTGTTTTTCAAATTATTAAATTCTTTTGGTTGCTGCTGTGGTAATCAGGTTCAGGAAAGGCTTTCTGGACTTCCCTGTGACGGTGCATTGTACATTGAAGCTGTGATACCTCAGCAACACATGCTTTCCATTCTAGAGGAGGATTTCATAGAATTGAATGATATTGTATGA