Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_01474 LG1 17311282 17311863 PREDICTED: transcription factor MYB44-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated
Cellular Component   is active in   nucleus
Cellular Component   located in   nucleus
Molecular Function   enables   transcription cis-regulatory region binding, protein binding, protein binding, protein binding, transcription cis-regulatory region binding, protein binding, protein binding, DNA-binding transcription factor activity, RNA polymerase II-specific, protein binding, protein binding, protein binding, protein binding, protein binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, protein binding, protein binding, protein binding, transcription cis-regulatory region binding, protein binding, protein binding, transcription cis-regulatory region binding, protein binding, protein binding, transcription cis-regulatory region binding, protein binding, protein binding, protein binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, DNA-binding transcription factor activity, protein binding, protein binding, protein binding, RNA polymerase II cis-regulatory region sequence-specific DNA binding, protein binding, RNA polymerase II cis-regulatory region sequence-specific DNA binding
SNP Position Effect Amino acid change
G/T 17311371 missense_variant p.Arg165Ser
C/T 17311405 synonymous_variant p.Pro153Pro
C/G 17311517 missense_variant p.Gly116Ala
C/T 17311569 missense_variant p.Ala99Thr
G/A 17311684 synonymous_variant p.Ser60Ser
T/C 17311745 missense_variant p.Glu40Gly

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_01474.1
MRRTKRCSSSFSSHSSESNPSNNHNSNNGVRVRGTWSAEEDRVLTGLVEAHGPKNWALISLHVKGRSGKSCRLRWCNQLSPTVEHRPFTTREDAIILHAHDRLGNKWAAIARLLPGRTDNAVKNHWNATLKRRASQRRRFGDDPLTALTLAPPGSGGGGWTGGFRDVVAREVREYVSFSFSDKLGSNEKLSKY*


CDS Sequence:
>Vu_01474.1
ATGAGAAGAACCAAACGATGTTCTTCTTCATTCTCTTCTCATTCTTCTGAATCCAATCCTAGTAATAATCATAACAGCAACAATGGTGTTAGAGTAAGAGGGACGTGGAGTGCGGAAGAAGATAGGGTTCTGACTGGGCTTGTGGAGGCCCATGGGCCGAAAAACTGGGCCTTGATAAGCCTACACGTAAAGGGCCGGTCTGGGAAGTCGTGCAGGTTACGGTGGTGCAACCAGCTAAGTCCAACGGTGGAGCACCGACCGTTCACCACGCGTGAGGACGCGATTATCTTGCACGCGCACGACCGGTTAGGGAATAAGTGGGCCGCCATTGCGAGATTGCTTCCGGGCCGGACCGATAACGCCGTTAAGAACCACTGGAACGCCACGCTCAAGCGCAGGGCCTCCCAACGACGTCGTTTTGGGGATGACCCATTGACTGCGCTGACTCTGGCGCCGCCGGGTAGCGGCGGCGGAGGTTGGACAGGGGGGTTTCGCGATGTGGTTGCGAGGGAAGTCAGAGAATATGTGTCTTTCTCGTTTTCCGACAAGTTGGGCTCTAACGAGAAATTATCCAAATACTAA


Promoter Sequence:
>Vu_01474::LG1:17311863-17313863(-)
TTAAACAGAATTATATATAAAATTCATTCGATAAATCAAATCACTCAAAAGTAATTCGGTAAATGTTTAAGCAGAACATATTTATATGCGATTGTTATCCATTAAAATATATACGGACAAAACATAGAGTAAAACTATAACTATATGATAAAATATTAAAAGGCTTATAATAGTCAAAGATAAATAAAAGAATAATGTGAATTTGAAGGGTGCAATATTTAATATAAAGTAGGTCTATAAGTAGTACGTAAGTTGTGTGGGAGTTTCTCGGTAAAATTTATAAAAGACAAAAATATAAAGGAAAAATAAATAAATTAACTAGTCCATAAATTAAAATTAATGTATGGATAAGTGAGTTTGTAAAACTTTTACTACAAAACTTTTTTATTTTTCAATTCATAATATAAGTTTAGCTAATAAAAGGTTAATTTGACTTTTTTGGAAATAATTTTTTTTTTCTAAAAGGCATCCTTAGCCAGAACTTTTTTAGTAATAATGTAATTAATTGAAACTCAGTTCTACACTGATGTAATTAAATTAAATCAGGTAAAAGTAGTTAAATTTTCCTTTTATATTTGAGATATTCATCATGCTCTATTTTATTAGTTGAAAATCACTAAATAAATAAAGAGAGAAAACCAATCAATAAAGGTGGCTCACATTTTTTTTTATTTTTTCATTTTAATTAGGTTTAACCAATGAAATAATATGCAAAAAAAGAAAAAAAAAACGTTTAAAATTGTTATCACCATTTTTTCATATTGGAACCCATTAAACTTTATTTAATTTTGTTGTAGTTGAGTGTTAAGAGTATTTATATATACATCTCTCTAATATAGTCATGAAATTACAATTATATGAGATTTATTTAGAGAAAAAAGAAAGTGTTTATAGTTACTTTAACCTTAGGTAAGTGTATTTAAGTTAGTCTACGCAATAAATTGGAGGAGGAATAAGAATAACATTCCTCACTGTGCTTTTCCTTTAACTTAAGGTAACTGTGTTTAAAAACTATTTAAGTATTTTTAATTATAATTTTAATATTCAAATAAATAATAATAACTATTTAAGTTATTTATCAAATTGTTTATATTTAGTACACTGATATATTTGATGCTATAAATTTTTAGCAATAAGTGACGATAACAAAGTTCACTTAATATTGGACATTAATAAAATCGGTCTAATCGATTCTAAACCATCATTAACTAAAACATGTGTGCTAATGTGAACTTAGTATAAACTTAACTAACACTAACTCAAAAAGTGTTAAAAGTTAATAAAACTAGCATTATTCTAATTGTTGCATCTTATTATTTTTACAAATTATATTTATTTTAGAGTTGGCTACACACTAGCTTTATTGTTTATTTAAATTAGCATTTATTAGGCTAACATTAATATTATATACTTTTATTATTTATTTAGATTAATATTTAAATCATCTACTTCTTTGTTTATACTATTGAAACTACTAGCAGCTATCCAACAAAAGAAGATAAAGAGAATAATCATTAATGAAAAGAAAAAAGACGTTTACTAAATAGCAATGCGACAAAACCAGTCAAAGGAAACAACATAACACAAACCGAAATCAAGAATAGTAAGAACAATAATACAACGTTGCAACTCTACAACCTAATCAATCAAATCAAGAGTGCTAGCCAGCCAGCCATAAAACTTTGGATTTCATAATGAAAATTGAGCTTTCTTTTTATTATTTTACAATAAAGAAACTATTATAAATTACTTAAATTATCATATTATGATGATGATAAAATAAAGCAGAGAATTAAATAAAAGAATAATTTTTTTAAGCATAGAAACCCTAAATAATTGAAGAGACTGTGCAAGACACATTTTCCAAACCCTAAATTACATAATCCTCACCCACCTTCCTAGAAGCTCCCTTGAATTGCACTCGTGCATGAACCTCACACTCTTTTTTCTCATATATAACCAGAATCAGACTGACTCAAAAATCAAATCCAAAAAGTAAA


Gene Sequence:
>Vu_01474(-)
ATGAGAAGAACCAAACGATGTTCTTCTTCATTCTCTTCTCATTCTTCTGAATCCAATCCTAGTAATAATCATAACAGCAACAATGGTGTTAGAGTAAGAGGGACGTGGAGTGCGGAAGAAGATAGGGTTCTGACTGGGCTTGTGGAGGCCCATGGGCCGAAAAACTGGGCCTTGATAAGCCTACACGTAAAGGGCCGGTCTGGGAAGTCGTGCAGGTTACGGTGGTGCAACCAGCTAAGTCCAACGGTGGAGCACCGACCGTTCACCACGCGTGAGGACGCGATTATCTTGCACGCGCACGACCGGTTAGGGAATAAGTGGGCCGCCATTGCGAGATTGCTTCCGGGCCGGACCGATAACGCCGTTAAGAACCACTGGAACGCCACGCTCAAGCGCAGGGCCTCCCAACGACGTCGTTTTGGGGATGACCCATTGACTGCGCTGACTCTGGCGCCGCCGGGTAGCGGCGGCGGAGGTTGGACAGGGGGGTTTCGCGATGTGGTTGCGAGGGAAGTCAGAGAATATGTGTCTTTCTCGTTTTCCGACAAGTTGGGCTCTAACGAGAAATTATCCAAATACTAA