Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_01442 LG1 16975350 16976970 PREDICTED: protein BRASSINAZOLE-RESISTANT 1-like
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Annotations  
category   relationship type   keyword
Biological Process   involved in   seed development, negative regulation of transcription, DNA-templated, seed development, negative regulation of transcription, DNA-templated, plant ovule development, plant ovule development, negative regulation of transcription, DNA-templated, seed development, transcription, DNA-templated, transcription, DNA-templated, regulation of transcription, DNA-templated, transcription, DNA-templated, brassinosteroid mediated signaling pathway, regulation of transcription, DNA-templated, plant ovule development, brassinosteroid mediated signaling pathway, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, brassinosteroid mediated signaling pathway, transcription, DNA-templated, plant ovule development, negative regulation of transcription, DNA-templated, seed development, brassinosteroid mediated signaling pathway
Cellular Component   located in   cytosol, nucleus, nucleus, nucleus
Molecular Function   enables   protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, DNA-binding transcription factor activity, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, DNA binding, protein binding, protein binding, protein binding, protein binding, protein binding
Pathway   B 09132 Signal transduction   C 04075 Plant hormone signal transduction [PATH:ko04075]
SNP Position Effect Amino acid change
C/T 16975486 missense_variant p.Gly269Asp
T/C 16975585 missense_variant p.Gln236Arg
A/T 16975590 synonymous_variant p.Ser234Ser
T/C 16975799 missense_variant p.Ser165Gly
T/A 16976136 intron_variant
A/G 16976269 intron_variant
C/A 16976279 intron_variant
C/G 16976325 intron_variant
G/A 16976439 intron_variant
T/G 16976441 intron_variant
A/C 16976449 intron_variant
C/T 16976640 intron_variant
T/C 16976686 intron_variant
T/C 16976696 intron_variant
C/T 16976958 missense_variant p.Gly5Arg

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_01442.1
MASDGATSAAAAASRRKPSWRERENNRRRERRRRAIAAKIYSGLRAMGNYNLPKHCDNNEVLKALCAEAGWCVEEDGTTYRKGCKPPLANGAGNSMRNVPFCSSQSPSPFSSSYPSPIPSYQVSPSSSSFPSPFRLDVDKDNVSNLIPYIRNASLSLPPLRISNSAPVTPPLSSPTSRNPKPIPTWESIAKESMASFNYPLFAASAPASPTHRHLYTPATIPECDESDTSTCESNQWMKFQAFGPSASTLPASPTFNLVKPLVPHRVPGNSIQEMRTSSEEFGVQVKPWVGEKIHEVALDDLELTLGSGKVRS*


CDS Sequence:
>Vu_01442.1
ATGGCCTCCGACGGAGCTACTTCGGCGGCGGCGGCGGCGAGTAGGAGAAAGCCGTCGTGGAGGGAGAGAGAGAATAACCGAAGGAGAGAACGGAGGAGAAGAGCGATCGCGGCGAAAATATACTCTGGACTTCGAGCTATGGGGAACTATAACTTGCCGAAGCACTGTGACAACAACGAAGTTCTCAAAGCGCTTTGTGCCGAAGCTGGTTGGTGCGTCGAAGAAGACGGCACTACCTATCGTAAGGGTTGCAAGCCACCTCTGGCCAATGGTGCAGGGAACTCAATGAGAAACGTTCCCTTTTGCTCTTCTCAAAGCCCAAGTCCTTTTTCTTCGTCGTACCCCAGTCCAATTCCTTCATACCAAGTGAGTCCTTCTTCCTCCTCTTTCCCAAGCCCGTTTCGGTTAGATGTGGATAAGGATAATGTATCAAACCTCATTCCATACATTCGCAATGCGTCCCTGTCTCTTCCTCCTCTGAGGATATCAAACAGTGCCCCTGTGACGCCGCCTCTTTCATCACCTACATCAAGAAATCCAAAACCAATTCCTACATGGGAGTCTATTGCCAAAGAATCCATGGCTTCCTTTAATTACCCTCTCTTTGCAGCTTCTGCTCCTGCCAGCCCCACTCACCGTCATCTTTACACCCCGGCCACTATTCCAGAATGTGATGAGTCTGATACTTCCACCTGTGAGTCTAACCAGTGGATGAAATTCCAAGCATTTGGTCCTTCTGCATCTACGTTACCAGCTTCTCCAACTTTCAATCTTGTTAAACCTTTGGTTCCACACCGTGTGCCTGGTAACTCAATCCAAGAGATGAGGACGAGTTCAGAAGAGTTTGGGGTACAGGTAAAGCCTTGGGTTGGGGAGAAAATTCATGAAGTGGCATTGGATGATTTGGAACTAACGCTTGGAAGCGGGAAGGTGCGGAGTTAG


Promoter Sequence:
>Vu_01442::LG1:16976970-16978970(-)
TATATACCTCGACGTGAGGAGGGGGTTGTTGTTGGAAGTCTCACATCGACTAGAGATACGACCAATTTATAGTATATATGCGGGTGCAAACCTCACCCTACTAACTGGTTGTATGAGGTTGAGTTAGGTATAAAGTCCACCTCTTAACACTAAACAAACCCTTACGACTTCATCCACTATGGCTGCAAAATTTGGAGCATGCTATGAGACATTAAATCAATAAATATGGTTGAAGAACTTTGTCACAAAGTTGTGTATTATGGAAGGAATCAAAAGACAACTCAAGTTATACTATGACAACAAATCAATTGTATTGTATTCTAACAACATTAGGAGTTCGTGCAAGTCAAAACACATTGCCATAAAGTTCTTAGTTGTTAAAGAAAGGGTCCAAAGTGGATAAATTTTCATTGAACACTTAGAGACAAACTGCATGATGACATATCCTCTTACTAAGGGACTTACACCCAAGGTCTTTCATGAGCATGTTGCTCATATAGGTGTTTTAATTTTTAAGAAATATTTGGTTTAGTAGAAGTTGGTCGCTTTTGTGTGTGTTTGTTCTATGTTTGTTTTAATGTATGTATACATTGTCTTTTAAACATATTTGGTTTAATAAATATATGGTTTATTATTCTGTCATTATACTCTGTATATTAAGGTTATTATATTGATTTCATTGAGATAAAGTAAGAACCAGTTATAAATAGAAGTGTACATGTCACTTTTATGTAATTTTCATGCTACAAGTTTCATGATGAATCTATGTAATTTGATTATGTCAACATTAGTGATCACTGTCAGGTTTGGTTATGATTGTTGTAATAAAAATTGTTTTGGTTCTACCTGCGAATATAATCAATGGACGAGATCTTATGCATATTCTTTAGGTATAGATTTTATGCATATGCTTTAGGTATAATATATATATATATATATATATATATATATATATATATATATATATATATATATGTCATTAAATATATTAGAATCATTATATTTTATTAGCCAATTTCATAAATTGATTTAATTAATTATTGTGTAGATACCATAAACAATATTTTAATTTGTTAAAAGATGAAATTAAAATATTAAAACTTAAAAAATAACTAACAGAAGTTACATAAAAAAAGTCATGATCGATATTTGAGCATGCTCATTATTTTGTTTTTTCTACGCATCTTTATAAAAAGAGGGTTTTACACTAAACTCTGTATATCAGTCTATTGTTTATTAATTGTTATCATTGAACAATTTAGATACATTTTCCTTTTTAATTATAAAGGATATGAGAAATTACTCTATTTATTAAAAGATTTATTGTTCATTAATTATTTTTCTGTTTATATATATATATATATATATATATATATATATAAAATTTAACATAAAATTGATAAAATAATATTTTTTTATTTAAAAATACTTAAAAAGTAAAATTGAAAAAAAATATTTACACAAAAGAGAATTTTTTTTATGTAATAGGATAGATAAACTAATTGGTAACCCTAACATATTTTTAAAATAAAATAATGAAGTTCATTCTTTATGGGATGGAGTGAGTTTAATTATTTTCAGTCACATTCAGTTGAATTAGTTTCAAATTTTGTTCTCAAATTAAAATAAATTTAATTCAATATCTTTTTCTTTTCTTTTTAAGAATTGGACTAAGTTAGTTTTAGACATTTGTTCTTCAGCACAATTATTATATGTTACACATCTGCAACACAAAAGGTACTAGTCTCCTATCATATCAATTTTTTTTTTCAATATATGAAAATAATAAATTTTTAATATATAATAATACTCATAAAATATAATTAATAGTATCCGTATATATGTATTATTACTGCTACCTTTTTCAGATTCTTCATTTCTTCCACTCATCCAGCGAAGACAATTGGAGAAAAGCGCGATCCTCGTGAATCCGTTTCGTTGCACTATCCTCGGGTTTAAATCGCCTGCAGCGCGCACACCCTAGTCTCCGTCGCCGGAAA


Gene Sequence:
>Vu_01442(-)
ATGGCCTCCGACGGAGCTACTTCGGCGGCGGCGGCGGCGAGTAGGAGAAAGCCGTCGTGGAGGGAGAGAGAGAATAACCGAAGGAGAGAACGGAGGAGAAGAGCGATCGCGGCGAAAATATACTCTGGACTTCGAGCTATGGGGAACTATAACTTGCCGAAGCACTGTGACAACAACGAAGTTCTCAAAGCGCTTTGTGCCGAAGCTGGTTGGTGCGTCGAAGAAGACGGCACTACCTATCGTAAGGTAATAAATTAAGTCAAATCACACTTTCAAACCGTTACAGCGTCACTGGATCTTATTTTTGATTTTGCATTTCGATCAAACCGTGCGTTTAGCTTTCCGTTTATGCTGTGCATTGCGCTCAGGAACCAGAAGCGAGACAGTGTAGGCATTGTTCTAGTTAACGTTAAACGAAGATTTCTAACTTAATTATCGGATTTTTTTTCTGATCCTTGTTTCTAATGCGTAATTAGATACGTAAATAATAGGTTGTGATAAGTAGCAATTAATCTCAGCCCTTTGATGTACCGAAAACGGAAGTGAACTTTGATATTCGAGGTGTGGGTTAACTTGATTGATTTATCTCGTAGGTGGAGTAAATAATCCAAATTGTAAATGGAAAAATGTACATTGTGTAACTACGGAGAATATTAATGGACGATTTCTTGTCAATTACTGAGATTTATCAGCGTATCACTTACTTTAGAGTCTAAATTGTTAACGCGATTATCTGTGATATATATAATATGAATTGATGGTTCTCTCATCAACTACTGAGATTATTGTAGTTGCTTACTTTAGACTCTAAATTGTTTGTGTTAATGTGATTAAATTTTTTCGTCACTCACTGGACTCTAAATTGATTGTGTTAAGGTGATTGATTTGAAATGGTAACGTAGTTTTGTGTGTTTTGGGTGAATAGGGTTGCAAGCCACCTCTGGCCAATGGTGCAGGGAACTCAATGAGAAACGTTCCCTTTTGCTCTTCTCAAAGCCCAAGTCCTTTTTCTTCGTCGTACCCCAGTCCAATTCCTTCATACCAAGTGAGTCCTTCTTCCTCCTCTTTCCCAAGCCCGTTTCGGTTAGATGTGGATAAGGATAATGTATCAAACCTCATTCCATACATTCGCAATGCGTCCCTGTCTCTTCCTCCTCTGAGGATATCAAACAGTGCCCCTGTGACGCCGCCTCTTTCATCACCTACATCAAGAAATCCAAAACCAATTCCTACATGGGAGTCTATTGCCAAAGAATCCATGGCTTCCTTTAATTACCCTCTCTTTGCAGCTTCTGCTCCTGCCAGCCCCACTCACCGTCATCTTTACACCCCGGCCACTATTCCAGAATGTGATGAGTCTGATACTTCCACCTGTGAGTCTAACCAGTGGATGAAATTCCAAGCATTTGGTCCTTCTGCATCTACGTTACCAGCTTCTCCAACTTTCAATCTTGTTAAACCTTTGGTTCCACACCGTGTGCCTGGTAACTCAATCCAAGAGATGAGGACGAGTTCAGAAGAGTTTGGGGTACAGGTAAAGCCTTGGGTTGGGGAGAAAATTCATGAAGTGGCATTGGATGATTTGGAACTAACGCTTGGAAGCGGGAAGGTGCGGAGTTAG