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Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

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Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_01351 LG1 16178562 16181868 hypothetical protein LR48
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/C 16179692 missense_variant p.Pro433Ala

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_01351.1
MVSSAGTFEAGFFQFGNSQDQYFCIWYKNISPKTIVWVANRDAPVKNSTAFFTLTEQGVPVILDASGSVVWTSNSSRTAKKPVMQLLDSGNLVVQDGDSTKDLLWESFDYPGDTFLAGMKLRTNFVTGPFRFLTSWRNAEDPGSGEFSYHIDAHGYPQLVTTKGELLFSRGGPWNGNVFSGVSWRRTLRLVKFSLESNGKEVIYQYKTLEAETITRLVINPAGLVQRLLWSGGSRGWEILSTRPMDQCDYYSFCDVNSLCNVTNSPKICTCLEGFVPKFYERWSSLDWSGGCVRRVNLSCDGDRFRKYTGMKFPDTSSSWYNDSLSLEKCEDLCLKDCSCTAFANINASGRGCLLWFGDITDLSRHTDQGQDIYMRLEASELVYSSDHGGSNQSFNSKNITGIIVGIVFLVVVLGLATFTYMKRKKLAKSDSTQSKQLGLTKRLQIIDGIARGLLYLHQDSRLRIIHRDLKASNILLDNDMNPKISDFGLARTFGADQAEANTNRVMGTYGYMPPEYALHGHFSIKSDVFSFGVMVMEIISGRKNRSFHDSKHQLNLLSHAWRLWTEDKPLELIDEVLPEPSPPGFYTGTTTQFPIQAESSSRSCGDRTQNEVTVSLLQPR*


CDS Sequence:
>Vu_01351.1
ATGGTTTCTTCTGCTGGAACTTTTGAAGCTGGATTCTTTCAGTTTGGAAATTCACAAGATCAATACTTTTGTATATGGTACAAGAACATATCACCAAAGACTATTGTGTGGGTGGCCAACAGAGATGCCCCAGTGAAAAACTCAACAGCCTTTTTCACACTAACAGAACAAGGAGTTCCTGTTATTCTTGATGCCTCAGGAAGTGTTGTGTGGACCTCCAATTCATCAAGAACCGCTAAGAAACCAGTTATGCAGCTTCTAGACTCGGGAAATCTTGTTGTGCAAGATGGAGACAGCACAAAAGACCTTTTGTGGGAAAGTTTTGATTACCCTGGTGACACTTTCCTTGCAGGAATGAAACTTCGTACAAACTTTGTGACTGGTCCTTTTAGGTTTCTCACATCTTGGAGAAACGCAGAAGATCCTGGCTCTGGTGAGTTTTCATATCACATAGATGCTCATGGCTATCCTCAACTGGTTACTACAAAGGGAGAACTTTTGTTCAGTAGAGGAGGGCCATGGAACGGCAATGTTTTCAGTGGAGTTTCATGGAGAAGAACGCTTAGACTCGTAAAGTTTTCGCTTGAGAGTAACGGCAAGGAAGTCATTTACCAATATAAGACCTTAGAGGCTGAAACTATTACAAGGTTAGTGATCAACCCAGCTGGTCTTGTGCAACGTTTGTTATGGTCGGGTGGCAGCCGGGGTTGGGAGATTTTATCCACTCGTCCCATGGATCAGTGTGACTATTATTCCTTTTGTGATGTGAATTCACTGTGTAATGTTACTAACTCTCCAAAAATATGTACATGTTTAGAAGGCTTTGTACCAAAGTTCTATGAGAGATGGAGTTCACTGGATTGGTCTGGTGGGTGTGTCAGAAGAGTAAATTTGAGTTGTGATGGTGATAGGTTTCGGAAGTACACTGGAATGAAGTTTCCAGACACTTCTTCTTCTTGGTATAACGACAGTTTGAGCCTCGAGAAGTGTGAGGATTTGTGTTTGAAAGACTGTTCTTGCACAGCATTTGCAAATATAAATGCCAGTGGGAGAGGGTGCTTGCTTTGGTTTGGTGACATTACTGATTTGAGCAGACACACAGACCAAGGACAAGATATTTACATGAGACTTGAAGCTTCAGAGTTAGTTTATTCCTCAGATCATGGAGGGAGTAATCAGAGCTTCAATAGCAAGAATATCACAGGGATAATAGTAGGTATTGTTTTCTTGGTCGTGGTGCTTGGATTGGCCACATTCACATATATGAAGAGGAAGAAGCTGGCGAAGAGTGATTCAACCCAAAGTAAACAACTGGGTTTGACAAAGCGCCTTCAAATTATTGATGGTATAGCACGAGGGCTACTCTATCTTCACCAAGACTCTAGATTGAGAATCATCCACAGAGATCTCAAAGCCAGCAATATTCTTCTAGACAACGATATGAATCCAAAGATATCGGATTTTGGTTTGGCTAGAACATTTGGAGCAGATCAAGCTGAGGCCAATACAAATAGAGTGATGGGAACATATGGTTATATGCCTCCTGAATATGCTCTCCATGGACATTTCTCAATCAAATCTGATGTATTTAGCTTTGGTGTGATGGTAATGGAGATAATCAGTGGGAGAAAGAATCGTAGTTTTCATGACTCTAAGCATCAGCTTAATCTTCTTAGTCATGCATGGAGATTGTGGACTGAAGACAAGCCACTGGAGCTAATAGATGAGGTATTGCCTGAGCCAAGTCCACCTGGGTTCTACACAGGCACAACTACTCAGTTTCCCATTCAGGCAGAATCTTCTTCGAGAAGTTGTGGAGATAGAACACAAAATGAAGTTACAGTGTCCTTGTTACAGCCACGATAG


Promoter Sequence:
>Vu_01351::LG1:16181868-16183868(-)
GTAGTTAGGGACATTCTACTTTATTTTTTAATGGCAAAATATGAAATGATACATGTAACAATTTATACAATGGTTTTTTTTGCCCATGTTTATTATTATGGGATGTAATAAATAATCTACAGAGGAAAGATTGACAGCATTAACTGTAATTTTCAGTTTGTTGTACAAATAGTGTTGTTTTTAAAATTTTAAAATATTTAACATATTGTTCTAAGTATTAAATTAATTATTTTATTCAAAGAGTTTGGCTATAGAAATAATATACGTATTTATTGATTGAATGGAACAAGGTTTTACAAAGGAATGAAAAAGGCTTGCTTAACAAAAAGAGATTCAAAGCTATAAATAGTTGAAATAAAGAGAGCACACGTGCATTCAAATTATGCAGTCACGTATGAATGTATATTCTAAGACCGCCCTCAAGCGGTCCGTAAATATTTTGACTGCCAAGCTTGGTATTGAGCTTAGAAACAGCCCTGCCAAGCCGTCAGTAATCAGGAGTGTATTTTCGTTGTGATATCTTACGTTTCTGTGAGTTTCAGCAGTATTAACGTGATGATCTTGGAGATATAGAGGCAGATTTCTAATTCTAAAAGATTTCCTTTAGCATTATCACTGAGTACATCATTATCATTAGCAGAAGCATTGGCATCATCAATATAAGATTCATTAGGTGCATTAACAACAGTAGTACAAGACAGCATGTAATAAGGCATATGACCAAAACTGGTTTGAGAGTTTGGATTGAAAAATCAAAGATCTAGTAACATTCAAAACGTGCTGATGTTTCCTTTCTGCTATTCCATTCTGCTCTAGAGTTTCAACACATGTAGTGTGATGAATTAGGCCCTTAGAATTAAAGAAACTAACCATGTTAAACTCATATCCATTATCGCTCCTAATCACCTTTATTTTGTCTTCAAATTGAGTTTCAACATACGAAACAAAAATGTATAATGTGATCTTTAGTTTTAGACTTATTTGTAATGAGATAAACCCATGTAAACCTGTTACAATCATCTGCAATAGTCAAAAAATACCTATGACCATGCAAAGGGGGAGAAGGGGATGTTCCCCAAATATCAATATGTATCAGATCAAAAGTTTTATTAGCATGAGAATCACTGTTCGAGAAAGGTAGCTTCTTTTGCTTAAAGCAATACAATCATGTTTATGTTTTAAAATTCCTAATCTTCCTATCAGAAGGATGGCCAAGCCTTTTGTGCCACAAGTTCCGAATGCTGTTAGCAGTATGATCAGGTGCAGAAAACATGCAAAGGATTTATGAATTTTTCTTTTGTAAAATACAAACATTAATTTTTACAAAATATGAGAATTAACTTGAATTATTTTTACATCTAATTTCATTTAATTTCTAGTGTTTCACCTTTGAATGGAATATGAAAGTCAACTCTATTAGTTGGACATCAAATGAACCTGTTCAGTAGTTGTTAAAAATATCATAAAGCAGAGGGTCCTATTGTTAACTGCATTGTTTGGTCCCCCTTTTCATTCATGTCTCAACTTGCACTGAGACTTTCTTATCCGAAAGTGAATCCTCACGTGTTGGATATTTCACACGACTATATTATGCAAGTGTTTTGTGTGCATTTATCGCTTTTCCCTCAGAAATTAAAACCATTGTAAGATTTTTGTACAGAGTAAAACTATTTTTCTTTCAATTGAAATGGTGTGTAAAAAATTCAACAATAGACAATTTCTTAATTTGTTATGTGATATTGGTCTAAAAATGCAGCTTCAATGTTATTCTGAAGACTTTTCAACACAAAAGGCACGTCTTAGGGACTTGGACAACCATTTTCTTCCAGTGATTTTAGTTAAATGAACTATGGAGGTTTGTAACCATGGAAAACCATCATAAACACAACAAGTTAACAATGTTACGCGTTTTATTTTTCTGCATCTTCTCCACGTTCCTATTATCTATACAAGGCACCCTTACTCTCACTCCAAATGAATCAATCCAAGGCAACACGACC


Gene Sequence:
>Vu_01351(-)
ATGGTTTCTTCTGCTGGAACTTTTGAAGCTGGATTCTTTCAGTTTGGAAATTCACAAGATCAATACTTTTGTATATGGTACAAGAACATATCACCAAAGACTATTGTGTGGGTGGCCAACAGAGATGCCCCAGTGAAAAACTCAACAGCCTTTTTCACACTAACAGAACAAGGAGTTCCTGTTATTCTTGATGCCTCAGGAAGTGTTGTGTGGACCTCCAATTCATCAAGAACCGCTAAGAAACCAGTTATGCAGCTTCTAGACTCGGGAAATCTTGTTGTGCAAGATGGAGACAGCACAAAAGACCTTTTGTGGGAAAGTTTTGATTACCCTGGTGACACTTTCCTTGCAGGAATGAAACTTCGTACAAACTTTGTGACTGGTCCTTTTAGGTTTCTCACATCTTGGAGAAACGCAGAAGATCCTGGCTCTGGTGAGTTTTCATATCACATAGATGCTCATGGCTATCCTCAACTGGTTACTACAAAGGGAGAACTTTTGTTCAGTAGAGGAGGGCCATGGAACGGCAATGTTTTCAGTGGAGTTTCATGGAGAAGAACGCTTAGACTCGTAAAGTTTTCGCTTGAGAGTAACGGCAAGGAAGTCATTTACCAATATAAGACCTTAGAGGCTGAAACTATTACAAGGTTAGTGATCAACCCAGCTGGTCTTGTGCAACGTTTGTTATGGTCGGGTGGCAGCCGGGGTTGGGAGATTTTATCCACTCGTCCCATGGATCAGTGTGACTATTATTCCTTTTGTGATGTGAATTCACTGTGTAATGTTACTAACTCTCCAAAAATATGTACATGTTTAGAAGGCTTTGTACCAAAGTTCTATGAGAGATGGAGTTCACTGGATTGGTCTGGTGGGTGTGTCAGAAGAGTAAATTTGAGTTGTGATGGTGATAGGTTTCGGAAGTACACTGGAATGAAGTTTCCAGACACTTCTTCTTCTTGGTATAACGACAGTTTGAGCCTCGAGAAGTGTGAGGATTTGTGTTTGAAAGACTGTTCTTGCACAGCATTTGCAAATATAAATGCCAGTGGGAGAGGGTGCTTGCTTTGGTTTGGTGACATTACTGATTTGAGCAGACACACAGACCAAGGACAAGATATTTACATGAGACTTGAAGCTTCAGAGTTAGGTATTTTCATTTCTTATATTATCATCTTTTGAGTTTCGGTCAAAATATTGCAGAAAGTAATATACGTTCCTAATTGAAGTGAAATCTAAACATGTCGCTTTTTTTGCTTTCCTTTTATGTTTCTCTTAAACTGAAATCTTTATACAGTTTATTCCTCAGATCATGGAGGGAGTAATCAGAGCTTCAATAGCAAGAATATCACAGGGATAATAGTAGGTATTGTTTTCTTGGTCGTGGTGCTTGGATTGGCCACATTCACATATATGAAGAGGAAGAAGCTGGCGAAGAGTGGTGAGTTTATGGAAAACTAAATTTGACTCTTTATGATACAATCAAATATCAGAATGCAATAAAATTATTAGAATGAAGAGAAGTGTTCAATTCTAAAGTCTGATTCATGTTCTTCTTATTATCCTTTATTTTGTTTGCTAAATTAAGCTGTGAACCATGCCATATTGGTATTTCCTACCATTGTTTTCAGAGGTGCTAAAAATATTTCATTGGAAGTTCAAAAGGGAGAAGGAAGATGTGGAGCTATCAAAAATATTTGATTTTTCAACCATCTCTGCTGCTACCAATAACTTTTCACCCAGTAACATATTAGGAGAAGGTGGCTTCGGGCCAGTGTACAAGGTAGTTAAATTTCACATCAAAGAAGCCTTGTTAATGGCATAAATAATTTCTCTTCACCAAAGTTTCAAAATTACTCTCAGGGTATACTGAAAGATGGGCAAGATATTGCAGTGAAGAGGCTTGCAAAAACTTCTGAACAAGGAGCGGAGCAGTTCAAGAATGAATTCATGTTAATGGCAAAACTTCAACATCGCAATCTTGTAAAACTTCACGGTTGTTCTATTCACCAAGAAGAAAGGCTTTTGATCTATGAATACATGCCCAACAGAAGCTTGGATTACTTCATTTTTGGTCTGAAATCTCACACCTTGAAAACTATGGCTCTTCATTTTGCTCTGTCTTGCTATTGTGTAGTTCTTACACTGATTTAAAAAGTGAAATTTTGTTAGATTCAACCCAAAGTAAACAACTGGGTTTGACAAAGCGCCTTCAAATTATTGATGGTATAGCACGAGGGCTACTCTATCTTCACCAAGACTCTAGATTGAGAATCATCCACAGAGATCTCAAAGCCAGCAATATTCTTCTAGACAACGATATGAATCCAAAGATATCGGATTTTGGTTTGGCTAGAACATTTGGAGCAGATCAAGCTGAGGCCAATACAAATAGAGTGATGGGAACATAGTAAGTAGTAAAAGTCATGTATTTTTACCATGTTACAACCCAGTTTGACATCAAAATTTTCTTTCATGCTTGTGTCCCAGTGGTTATATGCCTCCTGAATATGCTCTCCATGGACATTTCTCAATCAAATCTGATGTATTTAGCTTTGGTGTGATGGTAATGGAGATAATCAGTGGGAGAAAGAATCGTAGTTTTCATGACTCTAAGCATCAGCTTAATCTTCTTAGTCATGTAAGCTTAAAGGCTATTTATTTCCTTGTTTCAATCACCCAAAACTATCTGTTGTATCCTGATAAATAATCTAGATGCTGTAATCTGAATACGTAGCAATAAACAGGTCAGAAATTTTGATTAAATATACAAAAAAAAGTCAAACTGTGTAAAGTAAACTCACTCAAATTCAATGCCACTCCTTTGACATGAAACTCAGTTTAAAATATTCTGTCAACCTTATACCAAGTTCTTCTGTTTGAAAATTCATACATTGTGTTATGTTTTCAAAACTCTTGATCTTATGCTCGCAATGAAAACATGAAAAAAATGGATAGGCATTGACTTTGACTCGTTGGTTTTATTCCATTTCAGGCATGGAGATTGTGGACTGAAGACAAGCCACTGGAGCTAATAGATGAGGTATTAGATTATCCAACCACACCATTTGAAATACTTAGATGCATTCATGTGGGTCTATTATGTGTACAACAAACACCACAAAACAGACCAAACATGTCCTCTGTGGTTTTGATGTTGAATGGTGAAAAGGTATTGCCTGAGCCAAGTCCACCTGGGTTCTACACAGGCACAACTACTCAGTTTCCCATTCAGGCAGAATCTTCTTCGAGAAGTTGTGGAGATAGAACACAAAATGAAGTTACAGTGTCCTTGTTACAGCCACGATAG

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