Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_01338 LG1 16050978 16052125 PREDICTED: ethylene-responsive transcription factor ABI4-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   positive regulation of transcription, DNA-templated, positive regulation of transcription, DNA-templated, response to stress, positive regulation of transcription, DNA-templated, positive regulation of transcription, DNA-templated
Cellular Component   is active in   nucleus
Cellular Component   located in   nucleus
Molecular Function   enables   DNA-binding transcription factor activity, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, DNA-binding transcription factor activity, transcription cis-regulatory region binding
SNP Position Effect Amino acid change
T/C 16051024 3_prime_UTR_variant
C/T 16051450 synonymous_variant p.Gly211Gly

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_01338.1
MLTSGMRMNASKQVKKSAKASSRKGCMRGKGGPENASCTFKGVRQRTWGKWVAEIREPNRGARLWLGTYETSVEAAMAYDCAARKLYGSDAKLNLPDLAMALAFNFQFPPPSPQIPHMQPSPQLQHSQIPSPYDIFNLPSFDFINNLTDDTNIMFNPVLSMPPQHAIADSAPVYASDSHVAIPYENTTIPMAIHPSNPLEINEDTVDPFGGSFNDIPDPMFDDSIWAEAARSLDFPLIPDAAGINEVETFLEVGPWDSLQTP*


CDS Sequence:
>Vu_01338.1
ATGCTGACATCAGGCATGAGAATGAATGCTAGTAAGCAGGTGAAAAAATCTGCAAAAGCGAGTTCCAGAAAGGGGTGTATGAGAGGCAAAGGAGGCCCTGAGAATGCCAGTTGCACCTTCAAAGGTGTGAGGCAGAGAACTTGGGGAAAATGGGTGGCTGAGATCCGTGAGCCTAACCGTGGTGCACGCCTCTGGCTTGGCACATATGAGACCTCTGTAGAGGCTGCCATGGCTTATGATTGTGCAGCACGTAAGCTCTACGGATCTGATGCAAAACTCAACCTCCCAGACCTTGCTATGGCCTTGGCCTTTAATTTCCAGTTTCCACCACCAAGCCCTCAGATCCCTCACATGCAACCATCACCACAGCTTCAACACTCTCAGATTCCCTCTCCCTATGACATTTTCAATCTCCCCTCCTTTGATTTCATCAACAACCTCACCGATGACACCAACATCATGTTCAACCCTGTGCTCTCCATGCCTCCTCAACATGCAATTGCTGATTCTGCGCCAGTGTACGCCAGCGACTCTCATGTCGCAATTCCCTATGAAAACACCACCATCCCCATGGCGATTCACCCCTCCAACCCCTTGGAGATCAACGAGGACACGGTTGATCCTTTTGGGGGGTCTTTCAATGACATTCCTGACCCTATGTTTGATGATTCCATCTGGGCTGAAGCTGCTAGGTCTCTTGATTTCCCTCTGATACCAGATGCTGCAGGAATTAATGAAGTTGAAACCTTTCTTGAAGTGGGTCCTTGGGACTCTCTGCAAACTCCCTGA


Promoter Sequence:
>Vu_01338::LG1:16052125-16054125(-)
TGACTACCTGTTTTATATTTTTTTAAAAGTGTTTTTCTTCACTTCGTTTAGTAATTGTTTAAACAGTCTCTTTATCATATTATAATTCTATACATTGACTTTGGTCAAAATTTGTTGTTGCTTGCAGAAAGGGCATCCAGATTAATGAGATGTTAAAGGAGATAAGGTTTGCTTTAAAGAAATGCTCGGGTTCAAGTGAAACATTGATTTCTACTTGAGAATAGCTTATTATATGTTTTTGTTAAGCAATACTGAATTGCAGTTCATCAAGTCTTTTTGCTATAGTTCTGGTATTAATTTGAATTTATCAGAGAACAAAGTTTTGAAGATTATTACCAGTTCCCAACAGAGGAATACGTGTAAGATGATGAAAGCATTGAGTATAACAGTTCAAGTTAATCTGTCTGATATTGTTGTAAGCATCAAGATTGACATGAAAAAGTTCATTTTGTTGTAAGCATCAGAATTGACATGAAAGTTTATAAAATTGTAAGCAGCAGAATTGACAAATTGAAAACGGGAGTTTATATTTTTTAAGCATGAAGAGTGGCAATTCCTCATGAAAGTTATATAATATTTAGTACAAATGTAAACAAAATTATGCAATATTTATATTCTGTATTGCGACAAGAATCATGTCTGTCATTCCCATGCTGCATAATAAATACATCATAAGACAACAAATAGCACAATAAATATTTATCAAAGACTATGTCATCTCCTATGGAAGTATTTGTGCACGCGTTCTTATTTGCATCTTCTATATAAATTGCTAGTTCAAACAAAATAAATCATGTGTCTGCGTGTCTAAATAACGTGTTTCTATGAAACAGACACCTATAAGCAAAATCATGTTTACCAACAATCTCACCTTGTGTTGAAAGCTTGGAATATAGTATAACAAACAGCACATATACGACATATATGTAAATATATATTGTACATGATACCCAATGTGAAAAGCAAACAAATCAAAAGTTAAGAGATAAACATGATGCCCAAGAATCATGGTTTTGAAAACTTCAAATTAGACAAAAAAAATAAATAAAAAATGAAGGTGTACTTGCAAATTGTCCTTGTGATACCTCTGTCGTACACAGAGGAATACAAGTAAAAAGTAATATAATATATCTAATTTATTTCGTGTCAGTTTCTCAATCCAGAGATGTTACTTTAGATGCTAATAAAGTGCACTCTTGAAGTGAATATTTTCAGCTTTAAACAATACAACCTTTCTATACTATTTTTTATCTTAATTTATCAGTATTGATAAGTGCATTTAAAGAGTGATCTGCACAGTTCTTTTATATTTCCTTACCCGAGCTGGAAGGAACCACTTCTTTCTAAGTTATTACAAAAGAAAAACTAACAGATAAATAACTAGTGAGTATGTGTGAATGCAAAATGTCTATCCATTTTGGTAGACTGACATGCTCAGCAGCACTTTGTTCAGTCATTGACTCTAGTTGAAGTTCTTTTAATGTGCACTGATTACAACTCTAAACTTTGAAACTACTAGGATCAGTTACTTTGGCTTTGTAATTATTGCGATTTTACGGATTAAATTTTCATTCCTGAGTCATAGTAATCTTGAACCGTTTCTTCCAAATGTCACATGACAAAACAGCATCTGATAGACAACATACACCAAGAGAAACCGCAACCCTCCTCTCACAGCTTTTAATTTCTTCTCTTATCTTTCATTTTTTATGTTGTGCATTCATGGCCTCATTTATTTCACTAACTAAATAAAAGGAAATCCAAATAAGAGTTTGCTCTCGAATCTTCTCTACCTGAGTTTGTATACAAACAAAAACCTGAGCCAAGTGTGTTCAAGAGAAGCCGACAGTGAGACTCAAGGTTGACACGATGATCCAAGTTCATCATGCCAAGTAGCTACTAAACTCCACTAATGGCCACGTTTGAAATACTTGGGTTAATTATTAAGTCTCAACACTTCTTATCTGAGTATAAATACCCTCATCACCTCCCTTTTTCTC


Gene Sequence:
>Vu_01338(-)
ACACCATACCAACCCTTCTCTCCTTGGTAACTCCCCTAGCACAATGCTGACATCAGGCATGAGAATGAATGCTAGTAAGCAGGTGAAAAAATCTGCAAAAGCGAGTTCCAGAAAGGGGTGTATGAGAGGCAAAGGAGGCCCTGAGAATGCCAGTTGCACCTTCAAAGGTGTGAGGCAGAGAACTTGGGGAAAATGGGTGGCTGAGATCCGTGAGCCTAACCGTGGTGCACGCCTCTGGCTTGGCACATATGAGACCTCTGTAGAGGCTGCCATGGCTTATGATTGTGCAGCACGTAAGCTCTACGGATCTGATGCAAAACTCAACCTCCCAGACCTTGCTATGGCCTTGGCCTTTAATTTCCAGTTTCCACCACCAAGCCCTCAGATCCCTCACATGCAACCATCACCACAGCTTCAACACTCTCAGATTCCCTCTCCCTATGACATTTTCAATCTCCCCTCCTTTGATTTCATCAACAACCTCACCGATGACACCAACATCATGTTCAACCCTGTGCTCTCCATGCCTCCTCAACATGCAATTGCTGATTCTGCGCCAGTGTACGCCAGCGACTCTCATGTCGCAATTCCCTATGAAAACACCACCATCCCCATGGCGATTCACCCCTCCAACCCCTTGGAGATCAACGAGGACACGGTTGATCCTTTTGGGGGGTCTTTCAATGACATTCCTGACCCTATGTTTGATGATTCCATCTGGGCTGAAGCTGCTAGGTCTCTTGATTTCCCTCTGATACCAGATGCTGCAGGAATTAATGAAGTTGAAACCTTTCTTGAAGTGGGTCCTTGGGACTCTCTGCAAACTCCCTGATGCATGCAATCGTCCTCAAAAGGAACTCCTAAGCCCTTATGATACAGAAGTAGTAGTAGTTAATAAAAGGTCATCTCAGACGATGAATACCTTGCATCACCAGAAGTTACAGTGTTATGTGAATATATAAGTGATGTATCAATTCTGTTAGGGTGTGGAGTACATAGGATTAAGGTTATATAGATATGAATGGTGTCTGTCTTATATTTGAAGTTTATGTCTCAAAAAGGCTGCTCCAGGATGTCAAGTTAACTTTATTAGCATGACAGAGATATCTGTATTATTTTATCAGCAGCAATATATTGTCTTATGTTTG