Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_01309 LG1 15661221 15664458 PREDICTED: uncharacterized protein LOC108338387
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, negative regulation of metabolic process, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated
Cellular Component   located in   nucleus
Molecular Function   enables   DNA-binding transcription factor activity, transcription cis-regulatory region binding, transcription cis-regulatory region binding
SNP Position Effect Amino acid change
G/T 15661309 3_prime_UTR_variant
A/G 15661483 3_prime_UTR_variant
T/A 15661572 3_prime_UTR_variant
T/A 15661573 3_prime_UTR_variant
T/G 15661583 3_prime_UTR_variant
T/A 15661644 synonymous_variant p.Pro396Pro
G/C 15661725 missense_variant p.His369Gln
A/G 15661815 synonymous_variant p.Asp339Asp
T/C 15661983 synonymous_variant p.Ala283Ala
C/G 15662235 synonymous_variant p.Pro199Pro
T/C 15662436 intron_variant
T/G 15662541 intron_variant
G/A 15662613 intron_variant
A/G 15662634 intron_variant
G/A 15662637 intron_variant
C/G 15662638 intron_variant
T/C 15662655 intron_variant
A/T 15662656 intron_variant
A/T 15662657 intron_variant
T/A 15662860 intron_variant
G/A 15662951 intron_variant
T/A 15662952 intron_variant
T/G 15662962 intron_variant
C/A 15662967 intron_variant
T/C 15662977 intron_variant
A/T 15663048 intron_variant
G/T 15663160 intron_variant
C/T 15663186 intron_variant
A/T 15663187 intron_variant
T/C 15663188 intron_variant
A/G 15663197 intron_variant
G/A 15663216 intron_variant
G/A 15663223 intron_variant
G/A 15663228 intron_variant
A/T 15663250 intron_variant
T/A 15663260 intron_variant
T/A 15663263 intron_variant
A/C 15663294 intron_variant
T/G 15663319 intron_variant
A/G 15663342 intron_variant
G/A 15663345 intron_variant
T/C 15663352 intron_variant
A/T 15663369 intron_variant
T/A 15663449 intron_variant
A/G 15663480 intron_variant
A/G 15663707 synonymous_variant p.Thr167Thr
A/G 15663719 synonymous_variant p.Val163Val
G/A 15663771 intron_variant
G/A 15663807 intron_variant
A/G 15663819 intron_variant
T/C 15663943 synonymous_variant p.Ser135Ser
G/T 15663956 missense_variant p.Thr131Asn
C/T 15663962 missense_variant p.Gly129Glu
A/T 15663964 synonymous_variant p.Ala128Ala
C/T 15664249 synonymous_variant p.Lys33Lys
T/A 15664298 missense_variant p.His17Leu
G/A 15664299 missense_variant p.His17Tyr
G/A 15664329 synonymous_variant p.Leu7Leu
A/T 15664368 5_prime_UTR_variant
C/T 15664385 5_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_01309.1
MALLTSLPEHSTTPKRHKRKPQQQQQQQKQKQKQKQKAASSWDQIKNLLTCKQMEGSRVHDPSKGYSKIGSSCSSICSFRDVVHGNTRVVHRSDNSSPESSSLGQETGLLTRKPVTASTRSTAAKSNAGTTYTSSSSSRGMQFRKLSGCYECHMIIDPSRLPVARSTVCACSHCGEVFPKMESLELHQAVRHAVSELGPEDSGRNIVEIIFKSSWLKKDNPICKIERILKVHNTQRTIQRFEECRDTVKNRALGSTKKNPRCAADGNELLRFHCTTLTCALGARGSSSLCSVPGCGVCTIIRHGFQGGGGGGGGEHAKGKGVRTTASSGRAHDSVVCGDGTRRAMLVCRVIAGRVKRVAEDTPPSEEEHVSVASYDSVAGYAGIYSNLEELVVFNPKAILPCFVVIYKVPSC*


CDS Sequence:
>Vu_01309.1
ATGGCTCTCTTAACTTCCCTGCCTGAGCACTCCACCACCCCAAAACGCCATAAACGAAAACCACAGCAACAGCAACAACAGCAGAAACAGAAACAGAAGCAGAAGCAGAAAGCAGCTTCTTCATGGGATCAAATCAAGAACCTTTTAACCTGCAAACAGATGGAAGGATCGAGGGTTCATGACCCTTCAAAAGGGTACTCAAAGATAGGGTCTTCTTGCAGCTCCATATGCAGCTTCAGAGACGTTGTTCATGGGAACACACGTGTGGTGCATAGGTCTGATAACTCTTCGCCGGAGAGTAGCTCTCTGGGTCAGGAAACCGGTTTACTCACCAGGAAACCGGTGACCGCTTCTACACGGTCCACTGCCGCAAAATCAAACGCTGGAACAACCTACACGTCATCATCATCTTCCAGGGGAATGCAGTTCAGAAAGCTATCTGGCTGTTATGAATGTCACATGATCATTGACCCTAGCAGGTTACCAGTTGCAAGAAGCACTGTGTGTGCTTGCTCTCACTGTGGTGAGGTCTTCCCTAAAATGGAGAGTTTGGAGCTTCATCAAGCTGTTCGTCATGCCGTTTCGGAGCTGGGTCCGGAGGATTCGGGGAGGAACATAGTGGAAATAATATTCAAATCGAGCTGGTTGAAGAAGGATAATCCCATATGCAAGATCGAACGGATACTAAAAGTGCACAATACTCAACGCACCATCCAACGGTTCGAGGAGTGCAGGGACACGGTTAAGAACCGTGCGCTGGGCAGCACCAAGAAAAACCCCAGGTGCGCAGCCGACGGCAACGAACTCTTGCGGTTCCACTGCACCACCTTAACGTGCGCACTTGGCGCACGTGGGTCATCCTCGCTGTGCTCCGTACCCGGCTGTGGTGTCTGTACAATCATCAGGCACGGTTTCCAAGGCGGTGGCGGCGGCGGCGGCGGCGAACACGCGAAGGGCAAGGGCGTGAGGACCACCGCAAGCAGCGGTAGGGCACACGACTCCGTCGTGTGCGGCGATGGCACGCGGAGGGCCATGCTGGTGTGCCGGGTGATTGCGGGGCGCGTGAAGCGCGTGGCGGAGGACACGCCGCCGTCGGAGGAGGAACACGTGTCGGTTGCTTCCTATGATTCTGTAGCCGGGTACGCTGGAATCTACTCGAATCTCGAGGAGTTGGTTGTTTTCAATCCAAAGGCTATTCTTCCTTGTTTCGTGGTTATTTACAAAGTGCCTTCGTGTTAA


Promoter Sequence:
>Vu_01309::LG1:15664458-15666458(-)
TTTTTTTTTTATGTTATTACCTATAGAATATATTTAAAATAAGATATCAAAAAAACAAAAGAAATATACTATAATTTTAGAAATTGAGTTTTAAATAAATAATACAGCATTATAAGAGATAACATATGAAAAAATGACACATTTTTATTAAAAAAAAAAAACAAGGTTTGAAAACAAAAGTAATAATTAATTATCAATGTAACTGATTCTAGCGTGGACCGCGCAAAACAAGGAAAATAGTAATATATTGACAGCTAATATTATTTATATAATCTATTAACAACCATTCATTTAATTACTTAACAAAATATTGTTAATTATTTCAAATAGTATTATTATGAAGAATTATTATTTGGTGTTGTGAGAGCATGATTTTTCTTAAAAGGAAAATACTACACATCAAACATCTAAATTAACCAACACAGGTTTTTCTAGATTAATATGTAATATTAAGTTTTGCATTTAGCCATAAATTATTACGCATAATTAAATGATTTTTTTGCAATTATCAATTTAAATATTATACCTAAAATTGTTTCTAATTGGTTGATAATGTAATATGTTATTTTGGCGAGATAAGTTTGTGTAAGAAATAGTTTTATTTATGTTTTGATCATATAAACTTGGAAGCAATTGAAAAGCACACGAGCTATTTAAAGGAAAAATAATACTTTCATACACTAAATTTTTACATTTGAAATTACCTTTTCTTATTTATTTATTTTAAATACAAAAATTTAATTTTTTTATGACTATTTTACCGTCTTAAATAAATATAAAAGAATGTCATCTATCATTATTTTATTTAAAATGCACAGTTGGAAGTTACAAAAAATGTTGGCGTACGTAGATGTATGCAATGCAACAAGTGATAGTTTATGTTCCATTGATGGCATCATTCTCACGAACTACACATCCTGGTCAAGTGCCTATTTCTGCGCCACCTTTCCATTCACCACATCTTTTCAAAGGTTCCTCTTCTCATAACAATTAATTCTTATTTAACAAAACTACCTTATTTCTATTGGTACAAATAAAATCCCACGATAAAATAAAGAATGACATGAATTTATATATATATATATAAAATATCTCTGTTTTAGAGTGATAAAAAAGTAAATTCAATTTATTTCTATTTATTTTTCTTATTTCTAATATATATATATATATAAAAGCTGTATAAATTAGTTTAAAGGAAAATATCTTAATTTATTGGTAATTAATTATGGTAAAGAAAAAATTAAAGAGCATTTATTATCGGATTTTTTCTATTCACATGTATACAACTACATCTACAAACTCTACATATATGCGAATGTTCAAACATAGAATTGAAAACCCTCCAACACAGTTAACACCTTGGTTTTTTCCTCACCGTCGAAGCACAGGTAGGCCACAGCTTCCCAGTTATAGGGGTGCTCACATGGCCATTTAAAAAAGTATCAAATATTAATTACCATTTCATATCTTTCAATTTTTTTATTCATTTGAAGACATTCAATCGCACTTTCACGTTCAAATAAAATCAAACCCCAACTTCTAGCTGAGAAATTCAAATCTCCCATCACTTGTACCATAAATTTTTAGTTGAAGGACAAGCACCCCACCACCCTCTGTTAAAAACTTTAAAGTGGAGAGAGAATATATAAATATATATATATATATATGAATGAAGGAAGAGGAAGCAACAAATATACTAGTATTCGAACACGTCCAAAATCTTAGTGTTACATTTATTTATTACATTCCCAATAGTGTACCAGAGGTAAGTGCATTTTAATTTCACGCGTTTGTAGGTCCAAAGCAGTGAAACTAATAACTATATTATAAAAAATAAAAAAATTAAATTGTGATACAAATACTACTACTCCATTATATATTAACATGAGGGTATAAATAAATAAATAAATAAATAAATAAAGCATGAGTGGGTGTCCCACCACACACAGCACCTTCTGCATCCTTCTTTATTACTCATCTGTGAGATCCTCTATTCTGCT


Gene Sequence:
>Vu_01309(-)
GTCTCTCATTTACACAGAAAAAATAAAAATCAAAACTTGTTCAAAAGACAACCTTTTTCATTGTATGAAACACGGAGAGAATTACCCTTTTGCTTCTCAAGGCTCTCTTTCATGGCTCTCTTAACTTCCCTGCCTGAGCACTCCACCACCCCAAAACGCCATAAACGAAAACCACAGCAACAGCAACAACAGCAGAAACAGAAACAGAAGCAGAAGCAGAAAGCAGCTTCTTCATGGGATCAAATCAAGAACCTTTTAACCTGCAAACAGATGGAAGGATCGAGGGTTCATGACCCTTCAAAAGGGTACTCAAAGATAGGGTCTTCTTGCAGCTCCATATGCAGCTTCAGAGACGTTGTTCATGGGAACACACGTGTGGTGCATAGGTCTGATAACTCTTCGCCGGAGAGTAGCTCTCTGGGTCAGGAAACCGGTTTACTCACCAGGAAACCGGTGACCGCTTCTACACGGTCCACTGCCGCAAAATCAAACGCTGGAACAACCTACACGTCATCATCATCTTCCAGGGGAATGCAGTTCAGAAAGCTATCTGGCTGTTATGAATGTCACATGATCATTGACCCTAGCAGGTACTACTACTATACACAAACACTTCAAATTAATTGCTTTAATTTCTCCTGAATTGATTAACTTATATATTTATCTTTTTTATAGTAAAAATTCAAACATTTTATTTAATGAAAATGGCTTTGAAAATGTTATAATTCAGGTTACCAGTTGCAAGAAGCACTGTGTGTGCTTGCTCTCACTGTGGTGAGGTCTTCCCTAAAATGGAGAGTTTGGAGCTTCATCAAGCTGTTCGTCATGCCGGTATTTTCAACATATCTCTCTTTTTTTTTCTATTTTTTATTTTATTTTCAGAAGAATATACATGCATCATATTTTAATTCCATTTTGTAATGTGATTTAATTTCAGAAAAATATTAATTCCTTCCTTTAATGCCATTTAATTATTCATTTATTCGTTCTTGAGTGCTAGTATACTAATACAGGTTAACGTTTTACATCTTTAATCCTCAAAGAGAAACAGTAACAGAGGTCTTCTAACATTAACTCGAATAATAATTTTTTTTTTCATGATATTAAAAAATGCTGTACTTCATCTGTTTTTTTTATTTATTTTCTAAGTGTGACTTTTTAGTTTAATTTTCTTTTCAAATTCAAGATAATGTTAATTATTTTGTCGTTATTTATTACATTTTTTTTCACCTAATCTGATTTCGACCTGGCAGTCTTAAACTACACTTAAATGTCAATTATAAAACGAATTTAATGTTCTTTAATTAATTCATTTAAGTGCATCCATTGACTTTATTTCTTTTACGAAGATATAACTACGTTTGTTTTCAATGACTGTAACAATTCATTAGGGTACTATAATAAGATTTTTATTCTGGTTACCTTTCACTAATTAATATCATGAATGTTTCACTTTACTGAGGAAAAAGAAGAAAAAAAATATGGAACATTGTTTGAAGCATTATAACAATTCTGTCTCTGTCAAAGTTAATTGATTGAACTGCCTTGTGCTTGAGGGAACGTGTTTGTGGGGTTAAAAAGTAAAAGTCAGCTTCGAAATCCGAAACATGGACTCCATCCATGCATTCGAACCTTTTATCCGATAATTTTGCTCTTCACGGTTACTTCCGTCGCAATCAACCCTAACACTGTTCTTTAGGATTGGATTTATCTTAACATGTTTGAAAATTTTATTATAATAATTTTTTGAAAAAACCAAATGGTAGAAATTCCAATCTAGTTTATTAGATAAAAAAAAATATTATATAAAATTAAAAGATGCATTAATTTATTATCTCCGTTAAACTTCTTTCTATACATCCATCATCATAAATCTCCTCTTCGATACATCTATCACTGAATAAATTTAACATTCAGAAAATGCACCCACCAAAATTTCAGTGCATTAGTTTGTGGGGGCAAAACATCCTCGATAGCTTGTTGTGTAGGAGAATTCGTACGAGATCACAGCTGTCTGCTGCAAAGGAAGATAAATGATCTGCTTCCGCAACGCGCCACCTCTTTATTGGTCCACACAGCACCACCCACCAAAAATAACAAAAAATTGACAATTGCGAATTTTCAATTAACTATGACTTGTTTAATTATAGTATTTATATTCTATTTCTACATTGAATAATAATATTAATTGTGTGTTTGGTGAACAGTTTCGGAGCTGGGTCCGGAGGATTCGGGGAGGAACATAGTGGAAATAATATTCAAATCGAGCTGGTTGAAGAAGGATAATCCCATATGCAAGATCGAACGGATACTAAAAGTGCACAATACTCAACGCACCATCCAACGGTTCGAGGAGTGCAGGGACACGGTTAAGAACCGTGCGCTGGGCAGCACCAAGAAAAACCCCAGGTGCGCAGCCGACGGCAACGAACTCTTGCGGTTCCACTGCACCACCTTAACGTGCGCACTTGGCGCACGTGGGTCATCCTCGCTGTGCTCCGTACCCGGCTGTGGTGTCTGTACAATCATCAGGCACGGTTTCCAAGGCGGTGGCGGCGGCGGCGGCGGCGAACACGCGAAGGGCAAGGGCGTGAGGACCACCGCAAGCAGCGGTAGGGCACACGACTCCGTCGTGTGCGGCGATGGCACGCGGAGGGCCATGCTGGTGTGCCGGGTGATTGCGGGGCGCGTGAAGCGCGTGGCGGAGGACACGCCGCCGTCGGAGGAGGAACACGTGTCGGTTGCTTCCTATGATTCTGTAGCCGGGTACGCTGGAATCTACTCGAATCTCGAGGAGTTGGTTGTTTTCAATCCAAAGGCTATTCTTCCTTGTTTCGTGGTTATTTACAAAGTGCCTTCGTGTTAAGGAAACACAAAAAAAAAAAAATTTCTATGATCGTAGCAGTACTGTATATTTAAATTTCTCCTTCAATTTCACAACTCTACCAAATAACAATGAATAAGTTACTAGTTATTGGTAATTGTATAGTTCAGTTACAAGTTGATAACTAGTAATTTATTGATCGTTAATTATATGGGGTTGTGGAATAGTGAAAATGTAAAGAACATCATGGTAACTGAATCATGGTAACTGAATCATGGTTCTTGAGTTATGGAATTAGAATGTTGTAATGTACTTTCTGCTATTTCTGCTATTTCTGCCATGCACACGCATGACCATCTAATTATGGTGGAAGGTGGATGTGGAACCCAGTTTGATGTAGTTACTTTTTCTTGC