Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_01259 LG1 15284676 15285821 PREDICTED: serine/threonine-protein kinase CDL1
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   protein phosphorylation, protein phosphorylation, protein phosphorylation
Cellular Component   located in   nucleus
Molecular Function   enables   protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity
SNP Position Effect Amino acid change
G/C 15284820 missense_variant p.Glu49Gln
C/T 15285053 synonymous_variant p.Pro126Pro
C/T 15285091 missense_variant p.Pro139Leu
G/A 15285125 synonymous_variant p.Val150Val
A/C 15285135 synonymous_variant p.Arg154Arg
T/C 15285236 synonymous_variant p.Leu187Leu
C/T 15285239 synonymous_variant p.Ser188Ser
A/T 15285276 missense_variant p.Asn201Tyr
T/C 15285532 downstream_gene_variant
T/G 15285575 synonymous_variant p.Val273Val
G/A 15285710 synonymous_variant p.Leu318Leu
T/A 15285735 missense_variant p.Ser327Thr
A/G 15285809 synonymous_variant p.Thr351Thr
C/T 15285813 missense_variant p.Pro353Ser

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_01259.1
MNCFCSGTRRKDVGIESSLGSNSKTKVKRAAATSYSFRELAAAAKGFNEENLIGEGGFGKVYKGRLSTGQLVAIKQLRLDGETHQGNREFVTEVLMLSLLHHSNLVKLYGYCTHGDQRLLVYEYMPMGSLEQHLSEKKPLSWRTRLMIGVGAARGLQYLHCIANPPVIYRDLKSANILLDSNLHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYCFGVVLLELITGRKAMDVTRKHREQSLVAWARPYLSDRRKVTQIVDPLLEGNYPLRCLQNAIAITAMCLQEQPNLRPPISDIVVALEYLASESVSEVSRHRQRSASPPRQSLSPSDTQTDPH*


CDS Sequence:
>Vu_01259.1
ATGAACTGCTTTTGTTCTGGTACTCGTCGGAAGGATGTGGGCATCGAGAGCAGTTTAGGGTCAAACTCAAAGACAAAGGTAAAGAGAGCGGCTGCAACGAGTTACAGTTTTCGCGAGCTTGCAGCGGCGGCGAAGGGTTTTAACGAAGAGAACTTGATCGGGGAAGGAGGTTTCGGAAAGGTGTACAAGGGTCGTCTCTCTACAGGACAGCTTGTGGCCATAAAACAATTACGTCTAGATGGTGAAACTCATCAGGGTAATCGGGAATTTGTGACGGAGGTTCTTATGTTGAGCCTCCTACACCATTCAAATCTTGTTAAATTGTATGGCTACTGCACCCATGGGGATCAAAGGCTTTTGGTATACGAATACATGCCCATGGGAAGCCTGGAACAACATCTCTCAGAGAAGAAACCACTGAGTTGGAGAACTCGACTGATGATTGGGGTGGGGGCTGCGAGGGGACTCCAGTATCTACACTGTATAGCGAATCCTCCTGTTATCTACCGGGACTTGAAATCTGCCAACATCTTGCTAGACAGCAATCTGCACCCAAAACTTTCCGACTTTGGGCTTGCGAAGCTAGGACCCGTTGGAGACAATACCCATGTTTCCACCAGAGTCATGGGAACATATGGGTACTGCGCCCCGGAGTATGCCATGAGTGGCAAATTAACTCTTAAATCTGATATCTACTGCTTTGGCGTCGTCTTGCTCGAGCTGATCACCGGACGGAAGGCCATGGATGTCACTAGGAAACATCGGGAGCAAAGCCTGGTTGCATGGGCTCGGCCATATTTGAGCGACCGGAGAAAGGTTACGCAGATTGTTGACCCTCTTCTGGAAGGAAACTACCCTTTACGCTGTTTGCAGAATGCGATTGCTATCACTGCAATGTGCCTCCAGGAGCAACCCAATCTTCGTCCCCCCATAAGTGACATTGTCGTTGCGTTGGAGTACCTTGCCTCTGAAAGTGTCTCTGAAGTCTCCAGGCACCGCCAACGCAGCGCTAGCCCACCACGCCAATCACTCTCACCATCCGATACCCAAACAGACCCACACTAG


Promoter Sequence:
>Vu_01259::LG1:15282676-15284676(+)
AAGTTTGGGACTCCTCCCTCCCTTGCATAGTCATTGTCAAAGTCCTCTACTGCACAAGGTGTGAAGTAACCACCATCATGTCTGTAACCACCATCATCTTTATTCTTCTCTTCCACCAACTCAGCCTCCAATTCAATTAACTCTTCTTTAAGTTCTTCAATTAAAGTATCTTAATCATCTAAAGCAGCCATAATTGCTTTTCTGTGTTTGCTTTTGCGTCTTGCCTTATTTTCATCCTTCAAATCCTCTCCATTGTATTCACGGATGCTTTCGCAATCGACTCACTAATTTCTTTGCTTGATGCACCGTAATCATCAAGCATATGAAATTTAACCCAAAATAGCATTGTACAAAGTCATTCATTCAAACTAATTTTATATGGACAACGAAGTACATACCACACCCCTCTCCATAGCACGTTTGATGAACTTGTCTCCCACATTTATATTAATCCAATGTAAAAGTCTAGGGTACTTCTCTACACGAACATGAGAAGGAATAAAACGATCACAAAACCAAACCTGCAAATACATCACACGGGATATAAGTAGTACTTGGAATTCAATACCAACAAACAATCAATGTACAACATTTACCTACAACACGTAAACACAACCATCCACATACACATTGCTCGCACCTTCTCCTTTCTTTCACGCTATAGAAGCTTTGCATAAACTCCTAAATAGATAATGATACACTATACGACCCCAACAATAATTACCCAAATCACTTATTCTATCAACAATTTCAAACATAATTGGGAAGACAGTTTTGCTACAATTAGGAAACAACACTTCACAAATTCCAACCAAAATGTACAAGCTACAAAAATGTACTGAAGGCAACTTCTTATGTTTTTTCTTAAGGAAATCATATATGAACTGCAATTCTTGCTTTCCATCACCAAAGTACTTGCGACAATCACTTTCTCTAAGTTGCTTTTCCTTTAATTTAATATTCTCACCAACTAAACTCAACCATAAACTCAAACATACATCAATGGACTTGAATTCCACAAGTCTTTCTCCGAAACAAAAACAACCAGTCTCATCAACCCATCTAATCAATAATTCGCTCAAAATATTCCTACTAATTTTAACATTTTTCTTAAGTTCTAAAAACAATCTAAATGGCGTCTTCGAAATGATTGACTTGTGCTCCTCACTCACTAGTTCATTCAATGTACCAACAAACTTGCTTTTCATTGAATGACGAACAAACAACTGCACAAAAAGTATACTTCTTCTTACGAAATAAACAAACAAATAAATTGACCATCACATTCCAAAACCAATAACCAACGCCAAAATAAGAATTCGGGAACGCATTCAAGTTCTTACCTTCTTTGAAGAACCAATGTCAACGGTGAAATCCATTGCACACAACGCTCAGATCTTGAATCGTCGACGAAGATCGATCAAAAACCTAAAATGGAGAGATAAGGGCACACTTACAACACACCAGCGAGGGAGATTGACCAAGGAAGATATGCACAAAATGAAGAGAGAAAAAGTAAAAATAAAAACCCTCAAATGAAGACAGTACTTCACGTATAAGGATACTTTCGGAATAAACACATTTTAACCCCTCAATCCTTTTTCTAATCGGTTTTCTTTTAAATAAATTTATTGAAATTAAACGAATTGAACACTGACACCTGTAGTTTACAAAACATTATCAATTTTACGTTCTCAACATATCGCAGTCCTTTATTATTATTATTATTATTACTATATGTATACATAAAGAGAGAGGCGTTGTCATTGGGCTAAAGAAAGGAGAAAATGGTTATCAATGCGTTAATATGGATATAGTTAGTGTGGTGCAGTTGGCATGCGCCAAAATTAGTGTTCCAAAATTGGCGTGAAGGGGCAGACATAGACAATATTGTATACGATGATTTAAGAATGGAGGAGAATGGTTTGTGTTATGTTACATTTATATAGAGATAGAGACACACACGGAGAGAGATTGATGTGATTTAAGGGAGAGAGGGA


Gene Sequence:
>Vu_01259(+)
ATGAACTGCTTTTGTTCTGGTACTCGTCGGAAGGATGTGGGCATCGAGAGCAGTTTAGGGTCAAACTCAAAGACAAAGGTAAAGAGAGCGGCTGCAACGAGTTACAGTTTTCGCGAGCTTGCAGCGGCGGCGAAGGGTTTTAACGAAGAGAACTTGATCGGGGAAGGAGGTTTCGGAAAGGTGTACAAGGGTCGTCTCTCTACAGGACAGCTTGTGGCCATAAAACAATTACGTCTAGATGGTGAAACTCATCAGGGTAATCGGGAATTTGTGACGGAGGTTCTTATGTTGAGCCTCCTACACCATTCAAATCTTGTTAAATTGTATGGCTACTGCACCCATGGGGATCAAAGGCTTTTGGTATACGAATACATGCCCATGGGAAGCCTGGAACAACATCTCTCAGAGAAGAAACCACTGAGTTGGAGAACTCGACTGATGATTGGGGTGGGGGCTGCGAGGGGACTCCAGTATCTACACTGTATAGCGAATCCTCCTGTTATCTACCGGGACTTGAAATCTGCCAACATCTTGCTAGACAGCAATCTGCACCCAAAACTTTCCGACTTTGGGCTTGCGAAGCTAGGACCCGTTGGAGACAATACCCATGTTTCCACCAGAGTCATGGGAACATATGGGTACTGCGCCCCGGAGTATGCCATGAGTGGCAAATTAACTCTTAAATCTGATATCTACTGCTTTGGCGTCGTCTTGCTCGAGCTGATCACCGGACGGAAGGCCATGGATGTCACTAGGAAACATCGGGAGCAAAGCCTGGTTGCATGGGTAAATGATATGAGTTTCTTCGTCTATATTATAAGTTATATTATTGTTCTTATACGCATGCGGTGTGTTCTGTGATTCCAGGCTCGGCCATATTTGAGCGACCGGAGAAAGGTTACGCAGATTGTTGACCCTCTTCTGGAAGGAAACTACCCTTTACGCTGTTTGCAGAATGCGATTGCTATCACTGCAATGTGCCTCCAGGAGCAACCCAATCTTCGTCCCCCCATAAGTGACATTGTCGTTGCGTTGGAGTACCTTGCCTCTGAAAGTGTCTCTGAAGTCTCCAGGCACCGCCAACGCAGCGCTAGCCCACCACGCCAATCACTCTCACCATCCGATACCCAAACAGACCCACACTAG