Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_01232 LG1 14977671 14980073 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated
Cellular Component   located in   nucleus, nucleus, nucleus, nucleus, nucleus
Molecular Function   enables   DNA-binding transcription factor activity, cis-regulatory region sequence-specific DNA binding, DNA-binding transcription factor activity, cis-regulatory region sequence-specific DNA binding
SNP Position Effect Amino acid change
T/G 14978006 synonymous_variant p.Pro112Pro
C/A 14978128 missense_variant p.Pro153His
A/G 14978184 missense_variant p.Asn172Asp
T/A 14978839 missense_variant p.Leu361His
G/A 14978945 synonymous_variant p.Pro396Pro
A/G 14979017 synonymous_variant p.Ala420Ala
G/T 14979506 missense_variant p.Asp544Tyr
G/T 14979554 stop_gained p.Glu560*
C/T 14979713 missense_variant p.Leu613Phe
G/T 14979987 missense_variant p.Arg704Leu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_01232.1
MEYGGLVQNCGFGSLWECDSASEEDSIEEVLAEGCWVETSGVGSCEAQYIGSSEAEMEVELRKRWWIGPNKVNSSVKDRLVVAVCYLRECTKNSNLMIQVWVPLRRGLVAGPEYLTRNLDDWVAVEMNMNVNMNSARDVSLRFYRSQEYPRLPYYVDLPGSLALPVFERGTNTCLGVIQILTPPCDTINYCPQLLNNNLLCNPFQAFEEVYEAAVNEIVEVMRCVCRAQNVALALSWAPCCIQQGGKCGGYGHSTENHLSTVERACFVGDAQVLGFKEASSQHHLLRGQGIVGTAFTTAKPCFAIDVAAFTRAQYPLAHHANIFGLHAAVAIPLRSLYTDFVVEFFLPKDCRDRENQSHFLSSISLILQQSCRTLHVVMGDEFTLPPLPPPPPPQPQPYVNNKEEIVMSEKSDSQWQAEACGSWIAHMMEAQAQEQKAKGVCVSLEYLEEAKEEFKVTGKCRWESGSSGAYDAVEVQEQHVFGDESQTQTQTQNFGGRRGRKSGEKRRTKAEKTISLPVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGITRWPSRKIKKVGHSLKKLQLVIDSVQGAEGAIQIGSFYNSFPELSSATSQSKNNNSSNNNSSSLYGHSPPSSSSPSTVPPQQQHLYFSTPNVSQTGLRVKATFGDEKIRFSLQPKWGFRDLEVEIGRRFNVKDLGNLVIKYLDDEGEWVVLACDGDLEECKDLHTTYESRTIRLALFQPSP*


CDS Sequence:
>Vu_01232.1
ATGGAATATGGGGGGTTGGTGCAAAATTGTGGGTTTGGGAGCTTGTGGGAGTGTGATTCGGCCTCGGAAGAAGATTCGATCGAGGAGGTGCTGGCAGAAGGTTGCTGGGTGGAAACGAGTGGCGTTGGGAGCTGCGAGGCTCAGTATATTGGAAGTTCAGAAGCGGAGATGGAGGTGGAGTTGAGGAAGAGATGGTGGATTGGACCCAACAAGGTTAATTCCTCCGTCAAAGACAGACTGGTGGTGGCTGTCTGTTATCTCAGAGAATGCACAAAGAACTCCAATCTCATGATTCAGGTGTGGGTTCCCTTACGCAGAGGGCTTGTAGCTGGGCCTGAGTATCTCACCAGAAATTTAGATGACTGGGTTGCAGTTGAGATGAACATGAACGTCAACATGAACAGCGCAAGGGACGTCAGCCTTCGCTTCTACCGAAGCCAGGAATACCCTCGCCTTCCTTATTATGTTGATCTTCCTGGTTCTTTAGCCCTCCCGGTGTTCGAAAGAGGCACCAACACATGCCTCGGTGTCATCCAGATTCTAACGCCTCCCTGCGACACCATCAACTATTGCCCGCAGCTTCTTAACAATAATCTTCTCTGCAATCCTTTCCAGGCATTCGAGGAGGTGTACGAAGCAGCGGTGAATGAGATTGTGGAGGTGATGAGGTGTGTGTGCAGGGCGCAGAATGTGGCATTGGCTCTCAGCTGGGCTCCTTGTTGCATCCAGCAAGGAGGAAAGTGTGGTGGGTATGGCCATTCCACGGAGAATCACTTGTCAACAGTGGAGAGAGCGTGTTTTGTGGGAGATGCACAGGTTCTGGGCTTCAAGGAGGCTTCTTCTCAGCATCATCTCTTGCGAGGACAGGGAATCGTTGGCACGGCCTTCACAACGGCCAAGCCCTGCTTTGCGATCGACGTAGCCGCCTTCACCAGAGCCCAGTATCCTCTGGCTCACCACGCCAACATCTTTGGCCTGCACGCTGCCGTCGCCATTCCTCTAAGAAGCCTCTACACCGATTTTGTCGTCGAGTTCTTCCTTCCCAAGGACTGCCGTGACAGGGAAAATCAAAGCCACTTCCTCAGCTCCATATCCCTCATCCTTCAGCAGTCTTGCCGCACCTTGCATGTTGTCATGGGCGACGAGTTCACGTTGCCCCCGCTGCCACCGCCTCCGCCGCCACAGCCGCAGCCATACGTTAATAACAAAGAGGAGATAGTTATGAGTGAGAAATCGGACTCGCAGTGGCAGGCAGAAGCATGCGGGTCGTGGATCGCGCACATGATGGAGGCCCAGGCCCAGGAGCAGAAGGCGAAAGGAGTGTGCGTGTCGTTGGAATACCTGGAAGAGGCGAAAGAGGAGTTCAAAGTGACAGGCAAGTGCAGGTGGGAGAGTGGCAGCAGCGGCGCTTACGATGCAGTAGAGGTTCAGGAGCAGCATGTGTTCGGCGATGAATCTCAGACCCAAACACAAACACAGAATTTTGGTGGGCGACGTGGCAGAAAGTCCGGCGAAAAGAGGCGTACGAAGGCGGAGAAGACCATCAGTTTGCCAGTTCTGAGACAGTACTTCGCCGGAAGCCTGAAAGATGCGGCAAAGAGCATCGGAGTGTGTCCGACAACTCTGAAAAGGATATGCAGACAGCACGGGATCACGAGGTGGCCATCGAGGAAGATAAAGAAAGTAGGACACTCTTTGAAGAAGCTTCAGCTAGTGATCGATTCGGTGCAGGGTGCAGAGGGTGCCATACAGATCGGCTCTTTCTACAACAGTTTTCCAGAGTTGAGCTCTGCCACCTCTCAGTCAAAGAACAATAACAGCAGCAACAACAACTCCTCCTCCTTGTACGGCCATTCCCCACCGTCATCCTCCTCTCCTTCCACCGTGCCTCCTCAACAGCAGCACCTGTATTTCAGCACTCCCAACGTCTCCCAAACAGGTCTTCGAGTGAAGGCTACTTTTGGCGATGAAAAAATCCGTTTCAGCTTGCAACCGAAGTGGGGTTTCAGAGATTTGGAGGTTGAGATCGGAAGGCGTTTCAATGTGAAGGATTTGGGGAATTTGGTGATAAAGTATTTGGACGATGAAGGAGAATGGGTTGTTTTAGCCTGCGATGGTGATCTTGAGGAGTGCAAAGACTTGCACACAACCTATGAGAGCCGCACCATTAGACTTGCCCTATTTCAACCTTCTCCTTAA


Promoter Sequence:
>Vu_01232::LG1:14975671-14977671(+)
GCTATAGTACAAAATAAAATTTTAAAAAATATAGGACCGACAGGTAAACAAAATGTTTATAACGATTTAATGATGTTTCCGAAGAAATGACAGGCTGATGGAAATGATCTTTGTAAAGGCTTATTAATGTCAAAAGTAATGATTTATTCTCAATACAATGCAATTGATATAGACATCCGATGTTGAAACGTGAATTCCATTGCAAGTACAAATTTCTAAAAGAGTAATAACATTACAATACGATACATTAATAAGTATTTAAAATTTATGACTTATAAAAGATGTATTTAAATTAATATGTCTTATAGTTCATTAAATATTTAATACTTTATTTTGTAATAATATTTATCTCATACGATATCTCTTATTTTTTTTTCAGTAAATGAGAATGTTGCATTAATATACATTTTTAGATAACTTAATTTTAATATTTAGAGTTGTGTTAACAAAAGAATACAAATACTAATAAGATCTGAGTCCAATCATATAAGATATTGATACTATTCTTTGTCTAAAATTTAAAGACAGTGAATTAATGAATCTTTCAATTTTATATAATGTTCTACTTTCTCATTTGAATTTATACTTGAATTCGTGAATCTCGTGAGTAACTGCTAAAATAATTAAATACTAAAATTTTTATTAAAATATTAAAAATTATAGAAGTATATGTGGGTATTTGATGTTTGTAGAATGTTTATAGTAGAAAAGTAATGAAACTTTTAGAAGAGATTAATTTTAGTGTTTTAAAAAAGAGGTGCCGAAACCTTGGATCTAGTTTAGGTAGCGAGGAAAACAACGTTGTAGTAGAGTAGCAGTGTTTCTGATGCGCATTGCGTTGTGTCGATTAATTCACCAATGAAACAGAGAAGAATCTTTTTCAATTTCGCGGCCTCAACTTGGATTTTAGAATATATTATCATCTCTTTTTCTTTCTTTTAAAAAAAAGAATTAAGAAATCTCTTCCATTGGTAAATTTAAATAATGTGATATACAGTATCTATATAGTATGTATGAATACGAATGTAGAAACATGGATTTGGCCAAAGAAGTCGTGCCCTTTACGCAATTTCGCATTCATCTTAAGTTTGCTATGGGGTTGCCACGTGGCGAAGAGAGGGAGAGAGAGAGAGAGACAGAGTGAGTGAGAGTGAGGCACTCCTACTCCTACATTCTTCATGGTTATGATCTCCCACTATTATGCAGCCGCTTCTGCATACTTATATTATTATTTATTATGTCAAAATCCTCATATTATATATTCAAAGAGCTGCCAACACTACCATATATATATATATATATACCAGTTTTATATTCAAAATTACCTACCTTTCAATGGATTCCTTATATCATTGATTAAATAAACAGCTATACTTTCTGGTGTATTTAAATCTAACATCTTAATACAGAGTATGCATCATAGTACGATAGGTATGTTGTGTAGGTTCAATATACACGTATTCATATACTTTGAATTAAGTTGTTTTCACGAATTTATTTTTGGTATCATTTCAAAAATTTAAATTTTTTGTATGTATGTTATGTATATATAAAGTTATATCTATTTCTTACTTTATCCTATAGCACGTATATAAGTATTAAGAAATAGTTTGTGTGATAATTAATGAGTCCTACACGTTGGTTTCAGAAGTTGATTTTTTTAGTTGTTGTTCGTAATAGAGGAAGCAGCTAAAATAAGTATAATATATAATTATTTAACAGCGGCGAGTAAGGGGGAAGAGATGTGCACATAAATGAATAAATAAACACCGGCCACTGTGAGTGACTGAGAGAGGAAGGGTCCCACTGGAATACCAGAAATTTTCCTTTTTCTGCTCATTCCTTTCTATTCTATATTCTCTTCTATATATATATAAAAGCCTTATGTTGAGTTGTGTTGAGGTCGATCAGGTACTTGTTTTCTCAAGCATCTAATAAATTTTCCTTCTTTTTCAATCTTCATCTTCAACCAAAGTCTGGGAAGTGAATTAAGAGCAGCA


Gene Sequence:
>Vu_01232(+)
ATGGAATATGGGGGGTTGGTGCAAAATTGTGGGTTTGGGAGCTTGTGGGAGTGTGATTCGGCCTCGGAAGAAGATTCGATCGAGGAGGTGCTGGCAGAAGGTTGCTGGGTGGAAACGAGTGGCGTTGGGAGCTGCGAGGCTCAGTATATTGGAAGTTCAGAAGCGGAGATGGAGGTGGAGTTGAGGAAGAGATGGTGGATTGGACCCAACAAGGTTAATTCCTCCGTCAAAGACAGACTGGTGGTGGCTGTCTGTTATCTCAGAGAATGCACAAAGAACTCCAATCTCATGATTCAGGTGTGGGTTCCCTTACGCAGAGGGCTTGTAGCTGGGCCTGAGTATCTCACCAGAAATTTAGATGACTGGGTTGCAGTTGAGATGAACATGAACGTCAACATGAACAGCGCAAGGGACGTCAGCCTTCGCTTCTACCGAAGCCAGGAATACCCTCGCCTTCCTTATTATGTTGATCTTCCTGGTTCTTTAGCCCTCCCGGTGTTCGAAAGAGGCACCAACACATGCCTCGGTGTCATCCAGATTCTAACGCCTCCCTGCGACACCATCAACTATTGCCCGCAGCTTCTTAACAATAATCTTCTCTGCAATCCTTTCCAGGTACTTCTTCTTCTTCTTCTTTAACTATTTCATGTTCAGTTTCTGCCATACCATAGCATGCCATGTTTAGTAACGCAATCGGAACAGGCATTCGAGGAGGTGTACGAAGCAGCGGTGAATGAGATTGTGGAGGTGATGAGGTGTGTGTGCAGGGCGCAGAATGTGGCATTGGCTCTCAGCTGGGCTCCTTGTTGCATCCAGCAAGGAGGAAAGTGTGGTGGGTATGGCCATTCCACGGAGAATCACTTGTCAACAGTGGAGAGAGCGTGTTTTGTGGGAGATGCACAGGTTCTGGGCTTCAAGGAGGCTTCTTCTCAGCATCATCTCTTGCGAGGACAGGGAATCGTTGGCACGGCCTTCACAACGGCCAAGCCCTGCTTTGCGATCGACGTAGCCGCCTTCACCAGAGCCCAGTATCCTCTGGCTCACCACGCCAACATCTTTGGCCTGCACGCTGCCGTCGCCATTCCTCTAAGAAGCCTCTACACCGATTTTGTCGTCGAGTTCTTCCTTCCCAAGGACTGCCGTGACAGGGAAAATCAAAGCCACTTCCTCAGCTCCATATCCCTCATCCTTCAGCAGTCTTGCCGCACCTTGCATGTTGTCATGGGCGACGAGTTCACGTTGCCCCCGCTGCCACCGCCTCCGCCGCCACAGCCGCAGCCATACGTTAATAACAAAGAGGAGATAGTTATGAGTGAGAAATCGGACTCGCAGTGGCAGGCAGAAGCATGCGGGTCGTGGATCGCGCACATGATGGAGGCCCAGGCCCAGGAGCAGAAGGCGAAAGGAGTGTGCGTGTCGTTGGAATACCTGGAAGAGGCGAAAGAGGAGTTCAAAGTGACAGGCAAGTGCAGGTGGGAGAGTGGCAGCAGCGGCGCTTACGATGCAGTAGAGGTTCAGGAGCAGCATGTGTTCGGCGATGAATCTCAGACCCAAACACAAACACAGAATTTTGGTGGGCGACGTGGCAGAAAGTCCGGCGAAAAGAGGCGTACGAAGGCGGAGAAGACCATCAGTTTGCCAGTTCTGAGACAGTACTTCGCCGGAAGCCTGAAAGATGCGGCAAAGAGCATCGGAGGTGAGATTTATATATATATGTATATATATAGATCATCAGATCAATCAAACTCAATATATCCGTTCTGTTGATTTATTAACGAACCGACGCATGCATGCATGCATGCACAATATGCAGTGTGTCCGACAACTCTGAAAAGGATATGCAGACAGCACGGGATCACGAGGTGGCCATCGAGGAAGATAAAGAAAGTAGGACACTCTTTGAAGAAGCTTCAGCTAGTGATCGATTCGGTGCAGGGTGCAGAGGGTGCCATACAGATCGGCTCTTTCTACAACAGTTTTCCAGAGTTGAGCTCTGCCACCTCTCAGTCAAAGAACAATAACAGCAGCAACAACAACTCCTCCTCCTTGTACGGCCATTCCCCACCGTCATCCTCCTCTCCTTCCACCGTGCCTCCTCAACAGCAGCACCTGTATTTCAGCACTCCCAACGTCTCCCAAACAGGTCTTCGAGTGAAGGCTACTTTTGGCGATGAAAAAATCCGTTTCAGCTTGCAACCGAAGTGGGGTTTCAGAGATTTGGAGGTTGAGATCGGAAGGCGTTTCAATGTGAAGGATTTGGGGAATTTGGTGATAAAGTATTTGGACGATGAAGGAGAATGGGTTGTTTTAGCCTGCGATGGTGATCTTGAGGAGTGCAAAGACTTGCACACAACCTATGAGAGCCGCACCATTAGACTTGCCCTATTTCAACCTTCTCCTTAA