Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_01120 LG1 14067131 14070521 PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g26540
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of root development, maintenance of root meristem identity, regulation of root meristem growth, regulation of root meristem growth, protein phosphorylation, protein phosphorylation, regulation of root meristem growth, maintenance of root meristem identity, regulation of root development, protein phosphorylation
Cellular Component   is active in   plasma membrane
Cellular Component   located in   plasma membrane
Molecular Function   enables   peptide receptor activity, protein serine/threonine kinase activity, peptide receptor activity, protein serine/threonine kinase activity, peptide binding, peptide binding, peptide binding, peptide binding, peptide binding, kinase activity, protein serine/threonine kinase activity, peptide binding, protein binding
SNP Position Effect Amino acid change
A/T 14067423 missense_variant p.Asn98Ile
A/T 14067431 missense_variant p.Ile101Phe
G/T 14067637 synonymous_variant p.Ser169Ser
G/A 14067693 missense_variant p.Ser188Asn
C/T 14067851 synonymous_variant p.Leu241Leu
G/A 14067860 missense_variant p.Val244Ile
C/A 14067868 synonymous_variant p.Thr246Thr
C/T 14067874 synonymous_variant p.Ala248Ala
T/A 14067888 missense_variant p.Leu253Gln
C/A 14067890 missense_variant p.Leu254Ile
A/G 14067892 synonymous_variant p.Leu254Leu
G/T 14067919 synonymous_variant p.Gly263Gly
G/T 14067922 missense_variant p.Lys264Asn
G/T 14068506 missense_variant p.Ser459Ile
T/A 14068556 missense_variant p.Ser476Thr
T/A 14068668 missense_variant p.Leu513His
G/C 14069050 missense_variant p.Lys640Asn
T/A 14069449 synonymous_variant p.Val773Val
A/G 14069509 downstream_gene_variant
C/T 14069701 downstream_gene_variant
G/A 14069710 downstream_gene_variant
C/T 14069722 downstream_gene_variant
C/T 14069833 downstream_gene_variant
G/A 14070032 splice_acceptor_variant&intron_variant
T/C 14070068 synonymous_variant p.Asp788Asp
G/A 14070300 missense_variant p.Glu866Lys
A/G 14070324 missense_variant p.Thr874Ala

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_01120.1
MSLSLRNLSSSYKIFSLSLLLLFHCCYSQLNEQGQALLAWKNSLNSSADALVSWNPSSTSPCNWFGVRCNLEGEVVEINLSSVNLQGSLPSNFQLFRNLKILALSAANITGRIPKEIGDCKELTFIDLSGNSLFGEIPEEICRLSKLQTLALHTNFLEGNIPSSIGNLSSLVNLTLYDNKLSGEIPKSISSLTELQVLRVGGNTNLKGEVPWDIGNCTNLVVLGLAETSISGNLPSSIGMLKRVQTIAIYTTLLSGSIPEEIGKCSELQNLYLYQNSISGSIPSQIGELSKLKNLLLWQNNIVGTIPEELGSCTQLEVIDMSENLLTGSIPTSFGKLSNLQGLQLSVNKISGIIPPEITNCTSLTQLEVDNNAISGEIPPVIGNLRSLTLFFAWQNKLTGKIPDSLSQCQDLQALDLSYNNLTGPIPKQLFGLRNLTKLLLLSNDLSGFIPPEIGNCTSLYRLRLNHNRLSGTVPSEITNLKNLNFLDVSSNHLVGEIPPTLSRCQNLEFLDLHSNSLIGSVPNNLPKNLQLIDLSDNRLTGELSHSIGSLTELAKLNLGKNQLSGSIPAKILSCSKLQLLDLGSNSFSGEIPKEIAQIPSLEIFLNLSCNQFSGEIPPQFSGLRKLGVLDLSHNKLSGKLDTLSDLQNLVSLNVSFNDFTGELPNTPFFRKLPLSDLTGNDGLYIVGSVDRKEAKVHARLFMKIILSILLSTSAVLILLTIHVLIRAHVSNKAFTGNNNWVLTLYQKFEFSVDDIVRNLTSSNVIGTGSSGVVYKHASMQQITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGGAHLVQWVRNHLASKGDPSDILDPTLRGRTDSTVHEMLQTLAVSFLCVSTRAEDRPTMKDTVAMLREIRFVEAPTAAYDASNGVSTVHASPSPLKTVVSHGTSKCSFDFSEDSIC*ASILLMKKV*


CDS Sequence:
>Vu_01120.1
ATGTCTTTAAGCTTGAGGAATCTCTCATCTTCTTACAAAATCTTCTCCCTCTCTTTGCTTCTTTTATTTCATTGTTGTTACTCCCAGCTTAATGAGCAAGGCCAAGCTCTTTTAGCATGGAAAAACAGTTTAAACAGTTCTGCAGATGCATTAGTATCTTGGAATCCTTCCAGCACAAGCCCATGCAATTGGTTTGGGGTGCGCTGCAACTTAGAAGGAGAGGTGGTTGAGATAAACCTGAGTTCAGTGAACTTGCAAGGCTCGTTACCTTCAAATTTTCAACTTTTCAGGAATTTGAAGATTCTTGCCCTCTCAGCAGCCAACATCACAGGCAGGATTCCAAAGGAGATTGGAGACTGTAAAGAGCTCACTTTCATTGATCTCAGTGGCAATTCTCTCTTTGGTGAAATCCCAGAAGAAATTTGCAGGCTGAGCAAACTGCAGACTTTAGCTCTGCATACCAACTTTCTTGAAGGCAACATTCCATCCAGCATAGGAAATTTATCGAGTCTGGTGAACTTGACACTCTATGACAACAAACTGAGTGGTGAAATTCCAAAGAGTATTAGCTCATTAACTGAGCTCCAAGTGTTGAGAGTAGGAGGGAACACAAACCTTAAGGGTGAGGTGCCATGGGATATTGGAAACTGCACCAACTTGGTGGTGTTAGGCCTTGCAGAAACCAGCATTTCTGGGAATCTTCCTTCTTCAATAGGGATGCTGAAAAGAGTTCAGACCATAGCCATTTACACAACTCTGCTATCAGGCTCTATACCAGAAGAGATAGGGAAGTGCAGTGAGTTACAGAACCTGTACTTGTATCAGAACTCAATCTCTGGTTCAATCCCAAGTCAAATTGGAGAGCTCAGCAAGCTTAAGAATCTTCTCTTGTGGCAAAACAATATAGTTGGTACAATCCCAGAAGAGCTTGGAAGCTGCACTCAACTGGAAGTCATAGACATGTCAGAAAATCTTCTCACAGGGAGCATACCAACCAGTTTTGGTAAGCTATCAAATCTGCAAGGGCTTCAACTGAGTGTTAACAAGATTTCAGGCATTATACCTCCTGAAATCACAAATTGCACTTCCCTGACTCAACTGGAAGTTGACAATAATGCTATCTCTGGAGAGATTCCTCCTGTTATCGGAAACTTGAGAAGCTTGACTCTCTTCTTTGCATGGCAGAACAAGCTGACAGGAAAAATCCCAGATAGTCTTTCACAGTGCCAAGATCTTCAGGCTCTTGATCTCTCTTACAACAATTTAACTGGTCCAATACCCAAACAACTTTTTGGACTGAGGAACCTCACTAAACTACTGCTTCTTTCCAACGATTTGTCTGGCTTTATACCACCTGAGATAGGTAATTGCACAAGCCTCTACAGGTTGAGGTTAAATCACAATAGACTGTCAGGTACAGTTCCATCTGAGATCACCAACTTGAAGAATTTGAACTTTTTGGACGTGAGCAGCAATCATCTTGTAGGGGAAATTCCTCCTACACTATCCAGATGCCAAAACCTTGAGTTTCTGGACCTTCACTCAAATAGTCTTATTGGCTCAGTTCCAAACAATCTGCCCAAAAACCTGCAGCTAATCGACCTCTCAGACAACAGACTAACAGGTGAACTGAGCCATTCCATTGGTTCATTAACCGAGTTAGCCAAACTCAACTTGGGAAAGAATCAACTCAGCGGAAGTATCCCTGCTAAGATCCTATCTTGCTCCAAGTTACAACTTCTGGACTTGGGAAGCAATAGTTTCTCTGGAGAAATTCCCAAGGAAATTGCTCAAATTCCTTCACTAGAAATCTTTCTCAATCTTAGCTGTAACCAGTTTTCTGGTGAAATTCCACCCCAGTTCTCCGGTCTTAGAAAACTTGGAGTGCTTGACCTCTCTCACAACAAGCTCTCAGGGAAGTTGGATACTCTCTCTGACCTTCAAAACCTTGTTTCTTTAAATGTTTCCTTCAATGACTTCACCGGAGAATTGCCTAACACCCCATTCTTCAGGAAGCTCCCTCTCAGTGATCTCACAGGAAATGATGGCCTCTACATTGTTGGTTCTGTAGACAGAAAGGAAGCCAAGGTTCATGCCAGGTTGTTTATGAAAATTATATTATCCATTCTCTTAAGCACCAGTGCAGTACTAATACTGCTCACAATCCATGTCTTGATTCGTGCTCATGTTTCTAACAAAGCATTCACGGGAAACAACAATTGGGTGTTAACTCTGTATCAGAAGTTTGAATTCTCAGTTGATGATATTGTCCGTAATTTGACTTCATCCAATGTGATTGGCACTGGAAGCTCTGGAGTTGTGTACAAGCATGCATCTATGCAGCAGATCACTGAGAAGAGTGATGTGTACAGTTTTGGGGTGGTCCTACTTGAGGTCCTGACAGGAAGGCACCCTCTTGACCCAACACTTCCTGGGGGTGGTGCACACTTGGTTCAGTGGGTTAGGAACCACTTAGCCAGCAAAGGAGACCCATCTGACATTCTTGACCCAACACTCAGAGGGAGAACTGATTCCACTGTGCATGAAATGTTACAAACTCTAGCTGTCTCATTTCTATGTGTCAGCACCAGAGCTGAGGACCGTCCAACAATGAAGGACACTGTTGCAATGCTTAGGGAAATCCGATTTGTTGAGGCACCAACCGCAGCTTATGATGCATCGAATGGAGTTTCAACAGTGCATGCTTCTCCATCACCTCTTAAAACTGTAGTTTCACATGGAACTTCTAAATGTTCCTTTGATTTTTCTGAGGACTCAATCTGTTGAGCTAGCATTCTACTCATGAAGAAAGTATGA


Promoter Sequence:
>Vu_01120::LG1:14065131-14067131(+)
AATCCTGTGTAGTAATCTTAGATTTTCATTTGTATGATAGGTGGGGGAAGTGCTACCTAAAGTTGGTAAATGTGTCTACAGAGTAGAAACACACTGAATTTTAGATGGAGAGATTTTTAATTTCAAAATTTAATTACTGAATTTTAGTTTTTTGATTCAAAAAGCCTATTAAGAAGTTCTGGAAATTTGAGACATATTATTAACCATAGAATTGCATCATTTGAGTTCTATGTGGACTGCAGACTCCTGAATATACTTCAACAGAATTTCTCTTCCTTTGTCGCATTACACGTACAAGCCTTAATTACTTTCTTTTCTATATGCTAATCATATTCCTGTTTCTTTTCTATGTCCCATCAATCCAATCTAGCTCTATAATTAAACTTTTATGCTCCTGTACAAATTAACTATTTAATTATTTGTTAGTAGTTATCTACACACATGCATATGCTTCACCAGAAAAGCACAAAATGGGTGGCTTCTCAGTCTCATACCTGTAATTCTGTCATCAGAGAAAAGCAAGAACAGATTCTTTTAATCTCAATATTTTCTAGTTTTAAAACTTAACTCATGATGACCACTTTGTGCAAATTAAGAAGGTGGATTACATATTTAAACCGTCTTTTTCTTTTTGTTTTGCCAGTTATCTCTTCTTGATTTCTGAACAAATTCCAATTCAAAGTTTGAAAATACTGTAATTTTGTCCCTATACTCATGACCATATCCTGCACAAATTATAATATCTTTCTTAATGTATTAGTAGCTTCCATGTGCACTTTCACTTCTGCAACAGATTCCTCATACACTCCATTTATACTTAAACAATACGAAATGGGTCTTAGTATTATTTTTGAAATAAAGTACGTCCCTTTTGCTTATATAGAATTTACCACTCCGAATATCTCAGTGGTATGAGTAAATTTTACACCAATTATGGATACCCAGATGAGATTTTGACAAAGGAAACAAACCCTTTCCTTGCATTCTGGAAAATCTGATCCAAATATGCAAGTTTATTGCTTAAAGTTCAGAACTTCTAAGGGTGGCATGTAGCAACCACCACATCAATGGCTCATCAAAAACTGCAGCCACACAAAAGCGATGGACCACAAAACGGGCCTAGCTAATTAAAGGAAGAAATTATCTTCTGGATTAACAGAATACAGAGCTATTTCACTCAACAATCAAAATGTCTATTCTATTTGATTAATCAACCATCACCATCTATGAGGTAAGATAATTATCTTAATAGCCAATTTCAAAAGTGCTAAAGTCATTTTGCTAGCCCTGGTGTGCTTACTTGGCCATGCCTTGTTTTCTGCTAATCTCCGCAACTAAACGAATACATGAACATGAAAAATAATTACTATTGCCAAATAAAAGCAAGAAACAAGATATTATATGTGTCCACGTGGGGAGCAAAAACCCAAAAGTCTTCTTTACGTGATTTTCACCCCTCCACCAGTTTCATGTCTCACAGTTCACTATTACTGAAACACTATCTAACAGAAACTAACAAATTGGATTACGTTCAGATTGCAAATTTGACAGAATTTCAATTCACTGGTTTGGCAGGTTAATCAAGATGAACCAATATAAAATGAAGTTTAATTTGACATGATTGAAAAATAATTATATCTCTTAAGTATGTGATCAAAATTTGATTTCCAAATATATGTGTATAGGATAACATATGTTGAGAAAAGTCAGATCACTATATGAATTTCATTATATCAATTCATTAGTCTTTACTTTTGTTCATGAATACACAGAGTTTCCGAAAAAGAAATGAATAAAAAGAGATGTTTGGCTCAATAAAAACCAACAACCATCATCATGGGTATGGACAAGTCCTTGTCATTGAACAGGAACATAGTGCAGCAATAAAAGAATGAGGAAGCTGGCTCTTGTGTTCAGAGCTTCTTCTCTTCCTCTATAAACAATTCATAGGATTTCCCCCTCCACAATCCCAAAACAGATCACTTCTCTTCTCTAAGCAA


Gene Sequence:
>Vu_01120(+)
ATGTCTTTAAGCTTGAGGAATCTCTCATCTTCTTACAAAATCTTCTCCCTCTCTTTGCTTCTTTTATTTCATTGTTGTTACTCCCAGCTTAATGAGCAAGGCCAAGCTCTTTTAGCATGGAAAAACAGTTTAAACAGTTCTGCAGATGCATTAGTATCTTGGAATCCTTCCAGCACAAGCCCATGCAATTGGTTTGGGGTGCGCTGCAACTTAGAAGGAGAGGTGGTTGAGATAAACCTGAGTTCAGTGAACTTGCAAGGCTCGTTACCTTCAAATTTTCAACTTTTCAGGAATTTGAAGATTCTTGCCCTCTCAGCAGCCAACATCACAGGCAGGATTCCAAAGGAGATTGGAGACTGTAAAGAGCTCACTTTCATTGATCTCAGTGGCAATTCTCTCTTTGGTGAAATCCCAGAAGAAATTTGCAGGCTGAGCAAACTGCAGACTTTAGCTCTGCATACCAACTTTCTTGAAGGCAACATTCCATCCAGCATAGGAAATTTATCGAGTCTGGTGAACTTGACACTCTATGACAACAAACTGAGTGGTGAAATTCCAAAGAGTATTAGCTCATTAACTGAGCTCCAAGTGTTGAGAGTAGGAGGGAACACAAACCTTAAGGGTGAGGTGCCATGGGATATTGGAAACTGCACCAACTTGGTGGTGTTAGGCCTTGCAGAAACCAGCATTTCTGGGAATCTTCCTTCTTCAATAGGGATGCTGAAAAGAGTTCAGACCATAGCCATTTACACAACTCTGCTATCAGGCTCTATACCAGAAGAGATAGGGAAGTGCAGTGAGTTACAGAACCTGTACTTGTATCAGAACTCAATCTCTGGTTCAATCCCAAGTCAAATTGGAGAGCTCAGCAAGCTTAAGAATCTTCTCTTGTGGCAAAACAATATAGTTGGTACAATCCCAGAAGAGCTTGGAAGCTGCACTCAACTGGAAGTCATAGACATGTCAGAAAATCTTCTCACAGGGAGCATACCAACCAGTTTTGGTAAGCTATCAAATCTGCAAGGGCTTCAACTGAGTGTTAACAAGATTTCAGGCATTATACCTCCTGAAATCACAAATTGCACTTCCCTGACTCAACTGGAAGTTGACAATAATGCTATCTCTGGAGAGATTCCTCCTGTTATCGGAAACTTGAGAAGCTTGACTCTCTTCTTTGCATGGCAGAACAAGCTGACAGGAAAAATCCCAGATAGTCTTTCACAGTGCCAAGATCTTCAGGCTCTTGATCTCTCTTACAACAATTTAACTGGTCCAATACCCAAACAACTTTTTGGACTGAGGAACCTCACTAAACTACTGCTTCTTTCCAACGATTTGTCTGGCTTTATACCACCTGAGATAGGTAATTGCACAAGCCTCTACAGGTTGAGGTTAAATCACAATAGACTGTCAGGTACAGTTCCATCTGAGATCACCAACTTGAAGAATTTGAACTTTTTGGACGTGAGCAGCAATCATCTTGTAGGGGAAATTCCTCCTACACTATCCAGATGCCAAAACCTTGAGTTTCTGGACCTTCACTCAAATAGTCTTATTGGCTCAGTTCCAAACAATCTGCCCAAAAACCTGCAGCTAATCGACCTCTCAGACAACAGACTAACAGGTGAACTGAGCCATTCCATTGGTTCATTAACCGAGTTAGCCAAACTCAACTTGGGAAAGAATCAACTCAGCGGAAGTATCCCTGCTAAGATCCTATCTTGCTCCAAGTTACAACTTCTGGACTTGGGAAGCAATAGTTTCTCTGGAGAAATTCCCAAGGAAATTGCTCAAATTCCTTCACTAGAAATCTTTCTCAATCTTAGCTGTAACCAGTTTTCTGGTGAAATTCCACCCCAGTTCTCCGGTCTTAGAAAACTTGGAGTGCTTGACCTCTCTCACAACAAGCTCTCAGGGAAGTTGGATACTCTCTCTGACCTTCAAAACCTTGTTTCTTTAAATGTTTCCTTCAATGACTTCACCGGAGAATTGCCTAACACCCCATTCTTCAGGAAGCTCCCTCTCAGTGATCTCACAGGAAATGATGGCCTCTACATTGTTGGTTCTGTAGACAGAAAGGAAGCCAAGGTTCATGCCAGGTTGTTTATGAAAATTATATTATCCATTCTCTTAAGCACCAGTGCAGTACTAATACTGCTCACAATCCATGTCTTGATTCGTGCTCATGTTTCTAACAAAGCATTCACGGGAAACAACAATTGGGTGTTAACTCTGTATCAGAAGTTTGAATTCTCAGTTGATGATATTGTCCGTAATTTGACTTCATCCAATGTGATTGGCACTGGAAGCTCTGGAGTTGTGTACAAGGTTACAGTACCAAATGGCCAAACACTAGCAGTTAAAAAGATGTGGACATCAGCAGAGTCAGGAGCATTTACTTCTGAAATTCAAACACTGAGTTCAATTAGACATAAAAACATCATCAAGCTTCTGGGTTGGGGGTCCAGCAAGAACATGAAGCTGCTGTTTTATGAGTACCTCCCTAACGGAAGCTTGAGCTCATTACTTCATGGTTCAGGAAAGGGAAAAGCAGAATGGGAAATCAGATACGATGTTATGGTAGGAGTGGCCAATGCACTTGCATATTTGCACCATGATTGTGAGCCTTCCATATTGCATGGAGATGTCAAAGCCATGAACGTGTTGTTAGGTCCTGGCTATCAGCCTTACCTATCTGACTTCGGCCTAGCTAGAATTGCAAGTGAAAATGGTGATTGTACAAATTCCAAGCCATTTCAAAGACCCTACCTTGCTGGCTCCTATGGGTACATGGCTCCAGGTACTTTTTTCTTACCAAGTTTGAATTAGTCAGTTTTTTTTTCAGTACTTGCACAACCCTTTGAAACTGAACTAACTTTTGTTTTTTGGTATGAGTACAGAGCATGCATCTATGCAGCAGATCACTGAGAAGAGTGATGTGTACAGTTTTGGGGTGGTCCTACTTGAGGTCCTGACAGGAAGGCACCCTCTTGACCCAACACTTCCTGGGGGTGGTGCACACTTGGTTCAGTGGGTTAGGAACCACTTAGCCAGCAAAGGAGACCCATCTGACATTCTTGACCCAACACTCAGAGGGAGAACTGATTCCACTGTGCATGAAATGTTACAAACTCTAGCTGTCTCATTTCTATGTGTCAGCACCAGAGCTGAGGACCGTCCAACAATGAAGGACACTGTTGCAATGCTTAGGGAAATCCGATTTGTTGAGGCACCAACCGCAGCTTATGATGCATCGAATGGAGTTTCAACAGTGCATGCTTCTCCATCACCTCTTAAAACTGTAGTTTCACATGGAACTTCTAAATGTTCCTTTGATTTTTCTGAGGACTCAATCTGTTGAGCTAGCATTCTACTCATGAAGAAAGTATGA