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Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

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Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_01098 LG1 13900009 13902066 hypothetical protein
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/G 13901436 upstream_gene_variant
G/A 13901505 upstream_gene_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_01098.1
MGTCMCMVVFFIFMLFLGALCEVAATQNNVVGFDFPSFTLDNNNITLLGDSFLWSNGVVRLTNVASTSSTGAVIYAYPIPLFHPPTATFASFSTTFTFSINNLNPASSGDGLAFFLSPNTTSTNLSLSAPLGLPSSFVAVEFDTHLDPRFGDPNENHVGFDVDSMKSLKTGDPILHGIDLKSGNTIIAWIDYDAGRTSLAVFLSYSLPKPVDPVLSVKFNLSQHLRNPVYIGFSASTQGITEIHQIQSWTFHSACAPARTRLHPHNVSVMGTVPISGSGSGSGSGSGGSASVSSPSTNSTSKKHGKRVGVGVVVAGSVSFFVVFSVLGYVFVRRSRGGREEKFENGFVACPRAFDYKELKSATREFHPSRIVGHGSFGTVYKAFFISSGTIAAVKRSRHSHEGKTEFQAELSIIAGLRHKNLVQLQGWCVEKGELLLVYEFMPNGSLDKMLYKEPEVGRPSMRRVLQILNHEAPPLTVPKVKPTLTFSSALPLTIEDIVSDTEEVFSTSRSVCEINFD*


CDS Sequence:
>Vu_01098.1
ATGGGCACGTGCATGTGCATGGTTGTCTTCTTCATCTTCATGCTCTTCTTGGGCGCTCTATGTGAGGTGGCAGCCACACAAAACAACGTCGTCGGCTTCGACTTCCCTTCTTTCACCCTCGACAACAACAACATCACCCTCCTAGGCGATTCCTTTTTATGGAGCAACGGCGTCGTAAGACTCACAAACGTCGCATCCACTTCCAGCACCGGCGCCGTCATCTACGCCTACCCCATCCCACTCTTCCACCCTCCAACCGCCACCTTCGCCTCCTTCTCCACCACCTTCACCTTCTCCATCAACAACCTCAACCCCGCCTCCTCCGGCGACGGCCTTGCCTTTTTCCTCTCCCCGAACACCACCTCCACCAATCTCTCCCTCTCCGCTCCACTCGGCCTCCCCTCCTCCTTCGTCGCCGTCGAGTTCGACACGCACTTGGACCCCCGCTTCGGCGACCCTAACGAGAACCATGTCGGCTTCGACGTCGACTCCATGAAGTCCCTCAAAACCGGTGACCCCATCTTGCACGGCATCGACCTCAAGAGCGGCAACACCATCATCGCATGGATCGACTACGACGCCGGTCGAACTTCTCTCGCCGTTTTCTTGAGCTATTCACTTCCAAAACCCGTGGACCCCGTCCTCTCCGTCAAGTTCAATCTTTCTCAACACTTGAGAAACCCCGTCTACATTGGATTCTCCGCTTCCACCCAAGGAATTACCGAGATTCACCAAATCCAGAGTTGGACCTTTCACAGTGCTTGTGCTCCCGCAAGAACGAGGTTGCACCCTCACAACGTTTCCGTGATGGGAACTGTACCTATTTCTGGTTCGGGTTCAGGTTCTGGTTCTGGTTCTGGTGGTTCTGCTTCTGTTTCTAGTCCAAGCACTAATTCTACTTCCAAGAAGCATGGCAAGAGGGTTGGCGTTGGTGTGGTTGTTGCGGGATCGGTCTCTTTCTTTGTGGTTTTTTCAGTCTTGGGGTATGTTTTTGTTCGGAGATCGAGGGGTGGGAGAGAAGAAAAGTTTGAGAATGGTTTCGTGGCATGTCCTAGGGCGTTCGATTACAAAGAGTTGAAGTCTGCGACAAGAGAGTTTCATCCGAGTAGGATTGTTGGGCACGGATCTTTTGGGACGGTGTATAAGGCGTTCTTTATCTCTTCCGGAACCATTGCTGCAGTGAAAAGGTCGCGGCACTCTCACGAAGGGAAGACAGAGTTTCAGGCTGAACTGTCCATCATAGCCGGTTTGCGGCACAAGAATTTGGTTCAGCTGCAAGGTTGGTGTGTTGAGAAGGGAGAGTTACTGCTGGTGTATGAGTTTATGCCCAATGGAAGTTTAGACAAGATGCTTTACAAGGAACCTGAAGTGGGGAGGCCTTCCATGAGAAGGGTGCTCCAGATTCTGAACCATGAGGCTCCACCACTTACTGTGCCAAAAGTTAAGCCAACACTCACCTTCTCCTCTGCACTTCCCCTCACTATTGAGGACATTGTTTCTGACACTGAAGAAGTGTTCAGTACCAGCAGGTCTGTGTGTGAGATCAACTTTGACTGA


Promoter Sequence:
>Vu_01098::LG1:13898009-13900009(+)
CTCAACAGAAAAAAAGAAAAATATCCATTTTTCCATTATCAATACTTTCAAGAGTGAAGGTACAGTCAAGATGCCATCTTTTCTTTATTTCAAAGGAGTGGAAGGAGTTAAAATTATTCAGATATGAGTTTCATAAGTACGAAAGCAGTATGAATGTCTCAAGGTAGAGGAACAACAATTTTCTACCGTGCAAGAGATGAGAACAAAGGAAAGAATCTGAGCTTTAAATCCAACTCACCAAACATCCGTAAATGCATGAAAGTAGGTGGATTAAAGCTTCCAGTTGCAACCAGAATTACGTATATCTTGTTGCTGTTTTATTGGGAAAGAGAGAATGAATGTCATAAATCATTATTAGGTCAATAGAAAACACCCCACAAAATTACCCATGATAAATATATAATAAATAATAAAGGAACATACTTGCTAGTGTTTCCAGGGGCGGGTTCATTATTAATCAAATTTAAAGCCAATTTATCCAGTGGCAGTGGAACATCCATGACCTGAAGCCATTAAAATATCATATCATTGCTGTAATAAAAAAAGAAGAAGCAAACAACTAGTTTTTTCCTTGTTTAAGTGAACATGAAATTCCAGTTTCAAGCTCTAAACAGAATACAACATGTGTTTTTATTCAGCTAAACGTGAAGAGAAGCAGTTTCAAGCTAGAAAAAGAAAATGAGAAAGCAGAGACAAACCGGTCATTAACAGCTAATCCACAAACTCGGTACTTTTCAATCAAGTTTAATTCGATGAGAATGAGGTGCAGGTGACTGTTGATGAAGCAATAGAAGAATTAGCGTCACACAATATATAAAAGCAGTGAAGAATGGGTGGATTTGCTAAAGGATTAGAGTGAGAAATGTGAATTTGGATTTGCTCGGTGATTGTAATTGGAGAAGTAAAAAGATATTGCAGTGAATTATAAAGAAAAGAATTAAAATTAGAGAGAGAAGGAACCTGGGTTTGTTGCTTGAGGAGGTGAGAGTGCTCCTTAATTTCAACATCCAACGAATACACAAATACTACAATTCATGAAACTTTCTTTCTTTGTTTCATGAATTTGGTTCCTTCAACGAAGGCGTCAAATTCCACATTCCAATATTCCATTTCCATGCTCACACCATACTTCACGCTTCTTCTTTTTTATTTTCCAATAGAATTCAATTGATGGGCCAACAAATACCCGTAGTCTGACACTGGCCCAATGTTGAAAAAGTTCTCCGTGCCCATCATCTTACAGCCTTTTACTTCCTGCACCCCACAATTTCTTCCCACATCCCATAAAATTTTCAAAATAAAAGTGACTTCCTAATTACATGTTTTGGAAACTTTTCACAATATTTTCAGAATAGAATTTTTGAAAGAAAATTTCTGAAATAAAATTTTATAATCACTAATAATGCCTTCCAAAAACGAAAATTTCGAAACACCCCTACTTGAAATATATTTTAGAAAGAACTTTCTAAAATATAAAATATATGTTTTGGAAATATTTTTTCGAAGCTGAGTGTTTTTCCGCATTTGTTCTCTACAATTTTGATGGCAACAATGATGGTGTGGAGGTTTGGTAAAAGATATTTAAGTCTTTTCCTATTTTTGGTGTGTACAGTAATTGTGGGGGTGTATGAAGCTATTTCCTATTCTACACCAACGTATACTTTAGGCCTCTTAGGGAATGAAAACAAACTTTTAAAAGTAATATTAAATGAAAATAATAAAGTAGGATTTATATATATATTTTTAGAAATTAATAAAATTATATATTCGATTTTTTTACTTAAATAAAACTAAAATCTATATATGAGTAATCCAATGAAATAAACGAAAACAATATAAATTTGAGTTAAATTTAATTAGTGAAATTTCATACCCACCCAAGCATGACTTGGTGAAGGCTAGCAAAAGTATTTAAGTTGTAGTTTATGATGAAAATAAGAAAAATAAAGTTATATTTTTCCATTGATTGATTGAATTCTTGTTGATTCTTGGAGAAGGCA


Gene Sequence:
>Vu_01098(+)
ATGGGCACGTGCATGTGCATGGTTGTCTTCTTCATCTTCATGCTCTTCTTGGGCGCTCTATGTGAGGTGGCAGCCACACAAAACAACGTCGTCGGCTTCGACTTCCCTTCTTTCACCCTCGACAACAACAACATCACCCTCCTAGGCGATTCCTTTTTATGGAGCAACGGCGTCGTAAGACTCACAAACGTCGCATCCACTTCCAGCACCGGCGCCGTCATCTACGCCTACCCCATCCCACTCTTCCACCCTCCAACCGCCACCTTCGCCTCCTTCTCCACCACCTTCACCTTCTCCATCAACAACCTCAACCCCGCCTCCTCCGGCGACGGCCTTGCCTTTTTCCTCTCCCCGAACACCACCTCCACCAATCTCTCCCTCTCCGCTCCACTCGGCCTCCCCTCCTCCTTCGTCGCCGTCGAGTTCGACACGCACTTGGACCCCCGCTTCGGCGACCCTAACGAGAACCATGTCGGCTTCGACGTCGACTCCATGAAGTCCCTCAAAACCGGTGACCCCATCTTGCACGGCATCGACCTCAAGAGCGGCAACACCATCATCGCATGGATCGACTACGACGCCGGTCGAACTTCTCTCGCCGTTTTCTTGAGCTATTCACTTCCAAAACCCGTGGACCCCGTCCTCTCCGTCAAGTTCAATCTTTCTCAACACTTGAGAAACCCCGTCTACATTGGATTCTCCGCTTCCACCCAAGGAATTACCGAGATTCACCAAATCCAGAGTTGGACCTTTCACAGTGCTTGTGCTCCCGCAAGAACGAGGTTGCACCCTCACAACGTTTCCGTGATGGGAACTGTACCTATTTCTGGTTCGGGTTCAGGTTCTGGTTCTGGTTCTGGTGGTTCTGCTTCTGTTTCTAGTCCAAGCACTAATTCTACTTCCAAGAAGCATGGCAAGAGGGTTGGCGTTGGTGTGGTTGTTGCGGGATCGGTCTCTTTCTTTGTGGTTTTTTCAGTCTTGGGGTATGTTTTTGTTCGGAGATCGAGGGGTGGGAGAGAAGAAAAGTTTGAGAATGGTTTCGTGGCATGTCCTAGGGCGTTCGATTACAAAGAGTTGAAGTCTGCGACAAGAGAGTTTCATCCGAGTAGGATTGTTGGGCACGGATCTTTTGGGACGGTGTATAAGGCGTTCTTTATCTCTTCCGGAACCATTGCTGCAGTGAAAAGGTCGCGGCACTCTCACGAAGGGAAGACAGAGTTTCAGGCTGAACTGTCCATCATAGCCGGTTTGCGGCACAAGAATTTGGTTCAGCTGCAAGGTTGGTGTGTTGAGAAGGGAGAGTTACTGCTGGTGTATGAGTTTATGCCCAATGGAAGTTTAGACAAGATGCTTTACAAGGAACCTGAAGTGGGGAGGTTGCTGAGTTGGTCTCACAGGGTGAACATTGCTGTTGGGTTGGCCTCTGTACTGGTTTACCTACACCAAGAGTGTGAGAGGAGAGTGGTTCACAGGGACATTAAGACTGGGAACATATTGCTGGATGGAAACATGAATCCTAGGTTGGGGGATTTTGGATTGGCAAAGCTGATGGATCATGATAAGAGTCCTGTGTCCACTTTGACTGCTGGAACAATGGGGTACCTTGCCCCTGAGTATCTTCAGTATGGAAAGGCCACTGACAAGTCTGATGTTTTCAGCTATGGGGTGGTTGTGCTTGAAGTGGCTTGTGGAAGGAGGCCAATTGAGAGAGAAGGGTCGAAAATGGTGAATCTGATTGAGTGGGTTTGGGGGCTGCATTCTGAAGGAAAGGTGATTGAAGCTGCTGATAAGAGGTTGAATGGGGAATTTGAGGAAGAGGAAATGAGGATGCTTTTGCTCTTGGGATTGAGTTGTGCTAACCCTGATACTGCTGGGAGGCCTTCCATGAGAAGGGTGCTCCAGATTCTGAACCATGAGGCTCCACCACTTACTGTGCCAAAAGTTAAGCCAACACTCACCTTCTCCTCTGCACTTCCCCTCACTATTGAGGACATTGTTTCTGACACTGAAGAAGTGTTCAGTACCAGCAGGTCTGTGTGTGAGATCAACTTTGACTGA

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