Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_01027 LG1 13314841 13316035 PREDICTED: ethylene-responsive transcription factor 3-like
Map

Annotations  
category   relationship type   keyword
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
A/G 13315074 synonymous_variant p.Gly21Gly
G/T 13315191 synonymous_variant p.Ser60Ser
G/A 13315431 synonymous_variant p.Thr140Thr
C/A 13315491 synonymous_variant p.Pro160Pro
G/A 13315580 missense_variant p.Arg190His
C/T 13315596 synonymous_variant p.Phe195Phe
C/T 13315655 missense_variant p.Ala215Val
G/T 13315661 missense_variant p.Cys217Phe
C/T 13315665 synonymous_variant p.Leu218Leu
G/A 13315671 3_prime_UTR_variant
C/T 13315674 3_prime_UTR_variant
C/T 13315703 3_prime_UTR_variant
C/T 13315708 3_prime_UTR_variant
C/T 13315729 3_prime_UTR_variant
G/A 13315730 3_prime_UTR_variant
C/T 13315731 3_prime_UTR_variant
G/A 13315769 3_prime_UTR_variant
G/T 13315783 3_prime_UTR_variant
T/A 13315784 3_prime_UTR_variant
C/A 13315786 3_prime_UTR_variant
C/T 13315802 3_prime_UTR_variant
A/G 13315958 3_prime_UTR_variant
C/T 13315963 3_prime_UTR_variant
G/A 13315987 3_prime_UTR_variant
T/C 13316009 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_01027.1
MRKGRGGAASVVTAAAAAANGSLLKEPRYRGVRKRPWGRFAAEIRDPLKKARVWLGTFDSAEEAARAYDAAARTLRGPKAKTNFPLSHPFCYPHPTTSPLFYAGFNDNNNHISNLNNPQRPTSSGMSSTVESFSGPRPPTAAGASATPFLTTTRRYPRTPPLVPEDCHSDCDSSSSVVDDGDNIVSSSFRPPLPFDLNAPPFDDAAADDDLRCTALCL*


CDS Sequence:
>Vu_01027.1
ATGCGGAAGGGAAGAGGAGGGGCGGCGTCGGTGGTCACGGCGGCGGCTGCCGCAGCCAACGGATCCCTTTTAAAGGAGCCTCGGTACCGGGGCGTGAGAAAGAGACCGTGGGGGAGGTTCGCGGCGGAGATCAGAGACCCGTTGAAGAAAGCCAGGGTTTGGTTGGGAACCTTCGATTCGGCCGAGGAAGCTGCTCGAGCCTACGACGCCGCCGCACGGACTCTCCGGGGTCCCAAGGCCAAAACAAATTTCCCTCTTTCACACCCTTTCTGCTATCCGCACCCCACCACCAGTCCTCTCTTCTACGCGGGTTTCAACGACAACAACAACCACATCAGCAACCTTAACAACCCTCAGAGACCCACCTCAAGTGGCATGAGTAGCACCGTCGAGTCTTTCAGCGGGCCACGCCCTCCCACGGCCGCCGGCGCTTCCGCGACGCCGTTTTTGACCACCACGCGGAGATACCCGCGCACTCCCCCTCTCGTCCCCGAAGACTGCCACAGCGACTGCGACTCTTCCTCCTCTGTCGTCGACGACGGTGACAACATCGTCTCCTCGTCGTTCCGCCCTCCCCTGCCCTTCGATCTCAACGCGCCGCCGTTCGACGATGCCGCTGCCGATGACGATCTCCGCTGCACCGCGCTCTGCCTCTGA


Promoter Sequence:
>Vu_01027::LG1:13312841-13314841(+)
ATCTTAATCATAAAAGAAAATTAGTCTCTAACTTCAAAAAGGGTGGAAAAATACATGTCTGAACAGATAAAATATTAAAATAAATAACAAATAAACTGTTTTGAGGTTATTTATATACACTTCTTAAGAGATTTATTAATTTTTTTTATTTAAATTTCAATTAGATGACTTAACCTAAGCCTCATCTTTCTATTTTTATTTTTATTTTTATTTACCAAACATGAAGACTTATGAATAAAAATAAACTATAAAAACTTGTTGCATTCAAATAAACTTTTTCAATACTTTGAATTCGTGTTCCTTCGCGTGTATAAAATAGCGTGTAAAAATTCGTGACATATTTTTATGTCATAAATTAAAATAAATAATCAACCAGTCATACTTTCACCTTATTTTATTTCGAATATTATTTTTCCTCTCTTGTTTTAGACGTATGTTTGGCACGACAATATCAAATAACTTAAAATGTTTCAATAATCTCGAATTATATATATTGCATTTCTCTTTATACGTGTATCCAATGTTTTAAATTTTCAATCTTTTCAAAGTTAAATTCATTTTCCTTTTAAAGAAAAGTATAACATTTTGTATAAAAACATGCTATATTGTTTTTTTCTGTTGAATCTGAAGACATAATAAATAATTATGAGGGATGAATGATTCTTTATCCTAAGGTTGAAGCATATGGTGAAAGGAATAAATGATGCAAAGAAAAATAAATCAATGGGGTCATGTGAAACCAGTGAGCATATGAAGGTGCATGCATTCTTCTCTCTTTCTCCCTCTTCATTTCAAATATCTTTTCTTCCATTAATTACAATGTAAGATAAAGATAAACTAAACCCATTCAAGCCAATTTCATTTCCTTCTAAGAGAATAAATTTATGAATGATTATCAGAAACAGGTTCGTATCGTCTCCAATAACAAAATCTATTGATTAGTAATACACATTGTTTCTACTTTTTTAGAAAATTAAAACAACAAAATCTATAATTAACTATGTAGAATACGTTTTTTCAAGTAAACGAGTTACTTACCCGAGTTGGCAATTACGGATCCAAGAAAGCAAAGTTTCAATCTTTAAAACAGTGAAAGAAAAAATCCTTCAAGATTTGTATGGCTTAATCGAGAAGTCTTAATTGTTTTTGCTTCCACTTTTTACTTTTATAGTATAATATAAGTTTATTATTGTTAAAAAAATAAAATAGAGAGTGTAAAAAAAAAAGATACAGTACACACACCAATAATTACGCTCTTGATTTCTTTTTGAGAAGAGAGTTAACTTTAAAAATATAGAAAAAATAAAAGAGAAATATTTAGCCGGCTATAAACTGCACTTACGCATGTCATAATTTGGTCTTTCGTCCTCAGCCGAAATATTTGAAGGGAATGAAAAGAAGAAAAACCCGTTTCTTTCTTGAAAATGGATTGAAATCAATTATTATAATTACTATTATTACTATTATAACATATTAAAATATTTATCAATTAATATTTAAGATACAGAGAAGAACATCTGTTGCATTGCATTTACCCCTCTGTGTGTGCCCACTGAAAAAAAAAAAAAAAAGATATGTCATGAAAGGGACCTCACCAAATCAAAAGTACACCAACCAAAGCAAGGCAAATTTTACCTCCAAGAAACCCCAAGGGTATTCTCGTCTTTCCACAAGATCCCTTAACTCGCTCTTCGTAATTTGAAAAAAAAAAAGATAAAGGAGGAGATAAGGAAAGCAAGACAAGAGGTCAGTTCGAGGAGAAAATAATAATAATAATAATAATAAAAAAAAAAAGGTAATACGAAAAGAGGGAAGAAAAACGCGAAGAGAAACACGCTTAATATTAGTATTAATATTAATATTAATATTATATTTTGTATTAGTGTGTAGTTGAAGGAGAAGAAGAAGAAGAGAAGGTGGTACCGCCTTCAATTCTCTCTCTTCTTTCTCTCTCCTATTCTGGTCCTCATCATCATCTTATACCTCTTCTTCCTCCTCCA


Gene Sequence:
>Vu_01027(+)
ATAACACTCATTCACCACTTGGGAAAAACCCATTAATATCACACACACACACACACATAAACACATCCTTACATGTTTCTCTGAGACACAGTCCAAGATCGAACCTTGTTGTGTAGGACGAACTTGGGTGTCTGTCTTTTTTCTTATTTTTTTATTAATTTCTCCGAAGAGATGCGGAAGGGAAGAGGAGGGGCGGCGTCGGTGGTCACGGCGGCGGCTGCCGCAGCCAACGGATCCCTTTTAAAGGAGCCTCGGTACCGGGGCGTGAGAAAGAGACCGTGGGGGAGGTTCGCGGCGGAGATCAGAGACCCGTTGAAGAAAGCCAGGGTTTGGTTGGGAACCTTCGATTCGGCCGAGGAAGCTGCTCGAGCCTACGACGCCGCCGCACGGACTCTCCGGGGTCCCAAGGCCAAAACAAATTTCCCTCTTTCACACCCTTTCTGCTATCCGCACCCCACCACCAGTCCTCTCTTCTACGCGGGTTTCAACGACAACAACAACCACATCAGCAACCTTAACAACCCTCAGAGACCCACCTCAAGTGGCATGAGTAGCACCGTCGAGTCTTTCAGCGGGCCACGCCCTCCCACGGCCGCCGGCGCTTCCGCGACGCCGTTTTTGACCACCACGCGGAGATACCCGCGCACTCCCCCTCTCGTCCCCGAAGACTGCCACAGCGACTGCGACTCTTCCTCCTCTGTCGTCGACGACGGTGACAACATCGTCTCCTCGTCGTTCCGCCCTCCCCTGCCCTTCGATCTCAACGCGCCGCCGTTCGACGATGCCGCTGCCGATGACGATCTCCGCTGCACCGCGCTCTGCCTCTGAACGTGCTGTGATGGTTTTAAATTTCTGATTTTTTCCACCCTTGATTTTTTGTTATTGTTGCGCGGAACAAATTATAATGATGATCAGATGTAAGATTGTGGCAATATGATCTTAGTTCTGTGAGAGGGAGATTCCGTGATTGGGTGTATTTTCTCTTTCTAAAATTTTATTTAGGAGGAAATATTGAATGAGAAAAAAAAAAGGTAATTATGAATTATGATATCTTTGTTGTTGAAAGATTAATGCCGGTGTGTATGCATTGTTCCCAGAATCTCTTTCTCTCTGTCTCAACGGCGTGTATTGTAGTACTACTTCATAGATTCAGTGTCGCTCTAACTTATATTTAGTTCGTTCTAGTTTCCTCAGT