Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_00746 LG1 10734341 10738290 chitin elicitor receptor kinase 1 isoform X2
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   cell surface pattern recognition receptor signaling pathway, protein autophosphorylation, protein autophosphorylation, cellular response to chitin, detection of peptidoglycan, detection of molecule of fungal origin, innate immune response, protein autophosphorylation, cellular response to molecule of bacterial origin, innate immune response, protein phosphorylation, defense response to bacterium, protein phosphorylation, cell surface pattern recognition receptor signaling pathway, protein autophosphorylation, cellular response to chitin, protein phosphorylation, cellular response to chitin, detection of molecule of fungal origin, protein autophosphorylation, detection of molecule of fungal origin, detection of peptidoglycan, response to chitin, detection of molecule of fungal origin, cellular response to chitin, cellular response to molecule of bacterial origin, detection of molecule of fungal origin, cellular response to molecule of bacterial origin, protein phosphorylation, cellular response to molecule of bacterial origin, cellular response to chitin, detection of molecule of fungal origin, protein autophosphorylation, cellular response to chitin, detection of molecule of fungal origin, intracellular signal transduction, defense response to bacterium, cell surface pattern recognition receptor signaling pathway, protein autophosphorylation, protein autophosphorylation, protein autophosphorylation, protein phosphorylation, innate immune response, detection of molecule of fungal origin, protein phosphorylation, defense response to bacterium, detection of peptidoglycan, detection of molecule of fungal origin, cell surface pattern recognition receptor signaling pathway
Cellular Component   located in   plasma membrane, plasma membrane, plasma membrane, extracellular region
Molecular Function   enables   protein serine/threonine kinase activity, protein self-association, transmembrane receptor protein kinase activity, identical protein binding, transmembrane receptor protein kinase activity, kinase activity, chitin binding, chitin binding, protein serine/threonine kinase activity, protein homodimerization activity, chitin binding, protein binding, protein serine/threonine kinase activity, protein binding, protein serine/threonine kinase activity, protein binding, protein serine/threonine kinase activity, transmembrane receptor protein kinase activity, protein serine/threonine kinase activity, transmembrane receptor protein kinase activity, protein binding, transmembrane receptor protein kinase activity, chitin binding, transmembrane receptor protein kinase activity, kinase activity, transmembrane receptor protein kinase activity, protein binding, protein binding, chitin binding, protein binding, chitosan binding, transmembrane receptor protein kinase activity, protein homodimerization activity
SNP Position Effect Amino acid change
C/T 10734359 synonymous_variant p.Leu7Leu
T/C 10734466 synonymous_variant p.Asp42Asp
T/G 10734500 missense_variant p.Phe54Val
A/G 10734508 synonymous_variant p.Ser56Ser
A/G 10734537 missense_variant p.Asn66Ser
C/T 10734648 missense_variant p.Ala103Val
T/A 10734694 missense_variant p.Asp118Glu
G/C 10734937 synonymous_variant p.Gly199Gly
T/C 10735044 intron_variant
T/C 10735511 upstream_gene_variant
A/G 10735576 upstream_gene_variant
C/T 10735586 upstream_gene_variant
C/T 10735666 upstream_gene_variant
A/G 10735688 upstream_gene_variant
A/G 10735702 upstream_gene_variant
A/T 10735905 upstream_gene_variant
G/C 10736064 upstream_gene_variant
T/G 10736127 upstream_gene_variant
C/T 10736134 upstream_gene_variant
A/G 10736189 upstream_gene_variant
C/T 10736279 upstream_gene_variant
T/C 10736437 upstream_gene_variant
C/T 10736511 upstream_gene_variant
C/A 10736566 upstream_gene_variant
T/C 10736618 upstream_gene_variant
G/C 10736755 upstream_gene_variant
A/G 10736802 upstream_gene_variant
G/C 10736823 upstream_gene_variant
G/A 10736825 upstream_gene_variant
G/A 10736828 upstream_gene_variant
C/T 10736914 upstream_gene_variant
C/T 10736923 upstream_gene_variant
T/C 10736931 upstream_gene_variant
A/C 10736932 upstream_gene_variant
A/G 10737032 upstream_gene_variant
T/G 10737085 upstream_gene_variant
C/A 10737117 upstream_gene_variant
G/T 10737131 upstream_gene_variant
G/T 10737136 upstream_gene_variant
C/T 10737137 upstream_gene_variant
G/A 10737139 upstream_gene_variant
C/G 10737148 upstream_gene_variant
A/C 10737155 upstream_gene_variant
G/A 10737207 missense_variant p.Ser240Asn
C/A 10737208 missense_variant p.Ser240Arg
T/A 10737209 missense_variant p.Ser241Thr
T/A 10737224 missense_variant p.Tyr246Asn
A/C 10737225 missense_variant p.Tyr246Ser
T/C 10737234 missense_variant p.Ile249Thr
A/G 10737250 synonymous_variant p.Leu254Leu
A/C 10737278 splice_region_variant&intron_variant
C/T 10737298 upstream_gene_variant
T/C 10737305 upstream_gene_variant
G/A 10737308 upstream_gene_variant
T/G 10737331 upstream_gene_variant
C/T 10737337 upstream_gene_variant
G/T 10737342 upstream_gene_variant
A/T 10737376 splice_acceptor_variant&intron_variant
G/A 10737436 missense_variant p.Ala282Thr
T/C 10737448 stop_lost p.Ter286Argext*?
T/C 10737523 stop_lost p.Ter311Glnext*?
T/G 10737536 upstream_gene_variant
T/C 10737548 upstream_gene_variant
T/C 10737549 upstream_gene_variant
G/C 10737588 upstream_gene_variant
G/C 10737590 upstream_gene_variant
T/C 10737602 upstream_gene_variant
A/T 10737679 missense_variant p.Met333Leu
G/T 10737684 missense_variant p.Lys334Asn
T/A 10737765 synonymous_variant p.Val361Val
A/T 10737786 synonymous_variant p.Ala368Ala
C/T 10737816 synonymous_variant p.His378His
T/A 10737865 upstream_gene_variant
C/T 10737890 upstream_gene_variant
T/C 10737906 upstream_gene_variant
G/T 10737908 upstream_gene_variant
C/T 10738031 missense_variant p.Pro415Leu
G/C 10738064 upstream_gene_variant
A/G 10738080 upstream_gene_variant
T/G 10738106 upstream_gene_variant
C/T 10738132 synonymous_variant p.Leu424Leu
C/T 10738140 synonymous_variant p.Ala426Ala

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_00746.1
MENRFRLSVFFMLWASMVHSAESECKRDCDLALASYNLTGGDLTYVSKLMKSEFVSKPEDILPYNNETIKNKDQVQAFTRVNVPFPCDCIGDFLGHIFKYDVASGDTYMSIATQNYSDLTTVQLLQSFNSYSPTDLPDTGTLDVFVNCSCGNSDISKDYGLFITYPLRPEDSLQSIANETGIESDLLLKYNPGVNFSQGSGLVYIPGKVEPPNCLSCVWKYVHQRANHVKWVRLIGYCIESSLFLVYEYIENGNLGQHLRRSEFDPLPWSARVQIALDSARGLQYIHEHTVPVYIHRDIKSENILIDRKLCAKVADFGLTKLIDVGSSSLLTANMKGTFGYMPPEYAYGNVSPKIDVYAFGVVLYELISAKEALITGGVHGAQLKGLVSLFDAAFDQQDPTEGLKKLVDPRLGDNYPIDSVCKMALLAKACTESDPQQRPNMSSVVVTLTALTSNSEDWDIASIIENPALANLMSGK*


CDS Sequence:
>Vu_00746.1
ATGGAGAACAGATTCAGACTATCAGTTTTCTTCATGTTATGGGCTTCTATGGTGCATAGTGCAGAATCCGAGTGTAAGAGGGATTGTGATTTAGCTCTAGCTTCCTACAATCTAACAGGAGGTGATTTGACATATGTATCAAAGCTTATGAAATCTGAGTTTGTTTCAAAACCTGAAGATATTCTCCCCTACAACAATGAAACCATAAAAAACAAAGACCAGGTGCAAGCCTTTACCAGGGTGAACGTTCCATTCCCTTGCGATTGCATTGGAGATTTTCTAGGTCATATATTCAAATATGACGTTGCATCAGGTGACACTTACATGTCCATTGCCACTCAGAATTATTCCGATTTGACCACTGTTCAGTTGTTGCAGAGCTTCAACTCATATTCACCAACTGATCTTCCTGATACTGGGACTCTTGATGTCTTCGTTAACTGTTCCTGTGGGAATAGTGACATTTCCAAGGATTATGGTTTGTTCATCACATACCCTCTTAGACCTGAGGATTCTTTGCAGTCAATTGCCAACGAGACTGGGATAGAGAGTGACTTGCTGCTTAAGTACAACCCGGGTGTAAATTTTAGCCAAGGGAGTGGTTTGGTTTATATTCCAGGGAAAGTTGAGCCTCCGAATTGCTTATCCTGTGTTTGGAAATATGTTCACCAGAGAGCAAATCATGTTAAATGGGTGCGTTTGATTGGATATTGTATTGAGAGCTCCCTTTTCCTTGTTTATGAATACATTGAGAATGGCAACTTAGGACAACATCTACGTAGATCAGAATTTGATCCTTTGCCATGGTCTGCCCGAGTTCAAATTGCTCTGGATTCTGCCAGAGGTCTGCAGTACATTCATGAGCATACTGTGCCTGTATATATCCATCGCGACATAAAGTCAGAAAACATTTTGATAGACAGAAAGTTATGTGCTAAGGTTGCAGACTTTGGTTTAACCAAGTTGATTGATGTTGGAAGTTCATCCCTTCTCACAGCTAACATGAAGGGCACATTTGGTTACATGCCACCGGAGTACGCATATGGCAACGTTTCTCCCAAAATCGATGTCTATGCTTTTGGTGTTGTTCTTTATGAACTAATTTCTGCAAAAGAAGCATTGATCACGGGTGGTGTACACGGTGCTCAATTAAAGGGCCTTGTGTCTTTGTTTGATGCAGCTTTTGATCAGCAAGATCCCACAGAAGGTCTTAAGAAACTGGTGGATCCTAGGTTAGGAGATAACTACCCAATCGATTCAGTTTGCAAGATGGCACTACTTGCCAAAGCATGCACAGAGAGCGATCCACAACAACGTCCAAATATGAGTTCTGTTGTGGTTACTCTCACAGCACTTACTTCAAATAGTGAGGATTGGGATATTGCTTCCATCATTGAAAATCCAGCTCTAGCAAATCTAATGTCTGGGAAATAG


Promoter Sequence:
>Vu_00746::LG1:10732341-10734341(+)
TGTTTGATAAAATAAATCAATTTATCTTTTAAGAAAAAAAAAATCATTTCAAAAATATTTGACTTGACTTTTGGATCGAGCTAATTGGACTTGATATTTGATCTAAATCAACTAGACTTCATGTTCGACTCAAGTCGGATTTTCTAAATCCTCACCTTTGATTCACTCTTTTCACACTTTATTGAACTGAATCAACTTTTTAGCGCTAAAGGTTGAGTTAAGCCAATTCAAATCAAAGGATTAAGCCAGATTGACTAGGATGAAAGGTTGAGATTACTGGTATGATTTTTAGTATAATCATTTTTAGTATGATTGAAGGTCAAAGTCACTTGGTTCAGGCCAGAGGTTGAGACAAGTCAATATGTATTAGAAGTTAAGATGAGTCAACCGTAGTCGGTCAGATAGCCAAGTCACTTGGGATGAAGATTCAACATAACTCATCCGAATTGAAGACTTTAGCCGAGTCAATCAGATAAAAGGTTGAGATAAGTCGTTTTAGGCCATCGATAAAGACGAGTCTGCTTTGGCTGAAGACCAAGTCAAGTTAGTTTGGACTCATAATAGGACTGAGTTAATTTGAGTTAGATGTCAAACTCAATAAAAACTAAAAGTTGATATGGGTTAGCTTTTTGGACTTGTAAACTTTTTTTTATCTGGACAAATGAGAAATTTCACAACTTGTGACATTTCAATTTCCTTTTTTTTTTAGTGAATTTCAAATTCTATTATTTTAATAATTTGAGATGTTATTTTAAGATTTTTCAAATTCAATTTTCTTTTAATATCTTCTTTCAAATAAGTTATTTTTCTTCGAAAGATTTTAAAATTTCCAAATATTAAATTCCCGATCCAAACACAACTGATTTTTTTTAAGTATATTATGAAGTAATTTTTTTTTCTCAGTAAAAAATATTTTCAGAAATTCAACCAGAAAAATATATTTAAGAAAGCCATGCAAAACTTCGTTGATTGATTAGGGTTGAGGTTAGTATGAGTGTGGATTAAGGTTATTAAAATGAATTAGTTTATATTTAAAATTATTATATAACTTGGAACATAAATTAATTTGATCATCTTTTTGGCCCAAGATATTTACGGGTAGTAGTGTAGTGTAGATGAGAAAAAGAAGCAGAATTAATGAAGAGTTAGTGTGAAGGGTTGAAGTCAATAGTCATAGTGAGCTTGTCGTGTGGGCAATGCCAACTACAACACACCTTGTTAGAAAATTTGAACGAGATAAATCAATTTTATTTCGAATTATAATACATTATACTATTTTTTTTAAAAAAAATTTGTTTGATAAAAAAATTCAATTCATCCATCTATATTTAATAAAATTCGAATCCCATTGATTTATTTAGTATTTTTATATATGAATGCTCTTTTATAGCCCACAAAAATAATATATTTTTAAACGAATTTTAAAAAAGTACTTTTTTGTAAAACAATTTAAAAAAAAATATATTTTTGAAAACATCTAGAAAAACAAGTTTAAGAAAAATTTACGTGCGAACAAAATTAACTAGATTAGTTTTGATATTGATGAGCGTATCTACTGTGTTTGAAAGACAATATATGAATCACAAAATTAATTGCATGAATTTGAAATCATGAATGGATGAGATGATCGTACTTGTGAAAGTATAAATAATAGAATAAATGGAGTATTTTGATTATCCTAGTCATTAATACGAACACGACTCTGAAATATGAAATTTGTCTAAAGTTAAAAGTAGATTATTAAACAATTATAATAAATATCAAAACGTATTCAATTTGTACAATACTCGTTACGTATACCTTCAAACACATCAAACATCCTTAAATCCAACGTATTCAAAAAGTTAGGCAAAAGACTACTGAAGACTTTAGTAAAAGAGTACAACGTTTCAAACAGCGTTTCAGATTATTCCAACACCAATTTGGACTGTTCAACACGCCCAGATTCTTGATTCTGTGTTGGATAGGCTTCACAAAAGTTTGTAAACTCTACCACCCAA


Gene Sequence:
>Vu_00746(+)
ATGGAGAACAGATTCAGACTATCAGTTTTCTTCATGTTATGGGCTTCTATGGTGCATAGTGCAGAATCCGAGTGTAAGAGGGATTGTGATTTAGCTCTAGCTTCCTACAATCTAACAGGAGGTGATTTGACATATGTATCAAAGCTTATGAAATCTGAGTTTGTTTCAAAACCTGAAGATATTCTCCCCTACAACAATGAAACCATAAAAAACAAAGACCAGGTGCAAGCCTTTACCAGGGTGAACGTTCCATTCCCTTGCGATTGCATTGGAGATTTTCTAGGTCATATATTCAAATATGACGTTGCATCAGGTGACACTTACATGTCCATTGCCACTCAGAATTATTCCGATTTGACCACTGTTCAGTTGTTGCAGAGCTTCAACTCATATTCACCAACTGATCTTCCTGATACTGGGACTCTTGATGTCTTCGTTAACTGTTCCTGTGGGAATAGTGACATTTCCAAGGATTATGGTTTGTTCATCACATACCCTCTTAGACCTGAGGATTCTTTGCAGTCAATTGCCAACGAGACTGGGATAGAGAGTGACTTGCTGCTTAAGTACAACCCGGGTGTAAATTTTAGCCAAGGGAGTGGTTTGGTTTATATTCCAGGGAAAGGTACATTCTTGCTTTGCTACCATGCTTTCTCCTTCTGATTTAAGTTCATGAGTTTTTGGACGTGTTTCATTTTTCATATGGATTGAAGGGTACTCTTTATTTATCCTTTTTATGTAAAAAAAAAAATGATTTTTTTGGTAGAACTTCCTCTATAGCTATTCTAGAACTCTTCTTGGCCTTTTGATCTTAAAGTTGAGCCTCCGAATTGCTTATCCTGTGTTTGGAAATATGTTCACCAGAGAGCAAATCATGTTAAATGGGTAAATGATGCAAAAGCTACAACTGATGGCTTCTGTCTTGAAGTGAAAAATCATGTTCATAACTTGTAACCAAACAGATTATTAGTTTGCTTCCAGAGATTTTGCTTTTGAGCAAAACATCTCAAAAGCATTAGTCACCGGATGTTCAATGGGATTTTGAATTTGTTGCATCTTCATCATCTAATGAAATAATCTGAATTGAAATTTGCATATGTTGTACCAAGGTCTGTCTAAGCTAGAAAATCATTGTTGACCTAGTTTGAAAGGTTTGCTCTCATTATATCATAAACGAAGGGAATTTACATTCCTTTTTAGTCACTTTTCCAGTGTTCTGTGATACTGATAGATTTATAGTTATGTCACTACCACATTGGCACTATTGATGATGATTTCATTCTTAGCCATTGAAAAACATGTATGTAACATACACAAAATGCTAACAAATTTCTGATTATATTCGATATGTTTACATTATAAGAATTACGCATTTAAGAGTACACTTAATTTTTGAGCTGCATGCTTATATCTATGGTTGTATCTTTCAACATATTTCCTAGGTACTGTTAACTTTGACACATGCCTGACATATTCTTGTTCCTTTACTTTCAGACCAAAATGGTGGCTATGTGCCCCTTCATCAAAGGTGATTCTTTTACCTTATTTCCACTCTATTTACAGAAGAAATTGACTAATTTTTCAATCTTTATAACCTGCTGATCTTAATGGCTGTATTTTCATTACCTTTTCAGCACTGGAGGTTGGACCTTCTCACTCCCCCAAAAAGTTGTTTTATTTGATGAACGATTTCGTTTGTGTTTGATTTTAATATCAGACACAAGGTCAGGATATTCTCAAAGTACAACGTAAACCTACTTTCTTCTCATGTATTATTTCTACAAAATCAGGCCCTGCGCTAAGAGTTATCGCTGGAATATCTGCTGGAGTAGTAACGGCACTTCTGCTATTGGCATTCTGTGGGTATGTTACATATTACCGAAGAAAGAAGGTATGGAAGAGGAATTTGCTCACAGATGAATTCATGATGAACTCGGCCAGAGTTATGAATGGTATATTTTCTTCTACTTTTATTTCCTCTATTTCTTCCTTCTCTTTCATTTAAATCTAACAGGGGATCTCACAATTTCAGAATATTAGCTGGTGTCGGTATAGTTTTTGTTGGCTGTGTAAAACTAGTTTGGTGTTCTGATTTTTCCTCTGCTTTTTATCATGGAATAGAGGAGCAGCACACATAGAAAATGAAAATATAGTTGATGATAGGGTATAGCAATAACTTCTGTTTATCGTCCCGCTTTCAGATGAAGCCTCTGGTGTTCCCGATGCAGAAGTTGGTACCAACACCATTAGGGTGGACAATTCAGCAGAGTTTTCATATGAAGAACTAGCCAATGCTACAAATAACTTCAGTCTGGCTAACAAAATTGGTCAAGGTGGTTTTGGGGAAGTCTATTACGCAGAGCTTAATGGAGAGGTTTGTAATGTCTATTGTCAATTTTTACTTTCGATCTCATGTATTTGAAATAAAAGTTGCATATTCTTCTAGTTATCATGTTTTCACATGGTTTTCAATTAATATGTGGTGTTGTTCTCTCTGAAGCATAATTGCATATATCACAATGCTACTAGGATCAAATATGCAATTGTTCATATTTCTATCTTTCCCAAGTTTCCCATTATAACATTCATGTATCCTATAGTTATAAAGAAGTCCTCTCTAATTACACAGAAAGCTGCAGTTAAAAAGATGGACATGCAAGCAACAAGAGAATTTCTAGCTGAACTGAAAGTATTGACACGTGTTCATCACTTGAACCTGGTATTATTTGAAACTTGGAGCATGTTTTTTTTTTTTTTCGTTTTTCCTTTTATGTTCCAGTTAAATAAAGAGGATTGCCGCTTTAAAACCTAAATATCTTTCTATTGATAACCATGTAGGTGCGTTTGATTGGATATTGTATTGAGAGCTCCCTTTTCCTTGTTTATGAATACATTGAGAATGGCAACTTAGGACAACATCTACGTAGATCAGGTTATATGAGCACATTAAAAACATTCTCAGTATTAGTGCATTTGTTTGATTGTTTAGTTTAATGCCTTTGTAAGTTAACGATGAAGTCAAGTTTGTTTCCAGAATTTGATCCTTTGCCATGGTCTGCCCGAGTTCAAATTGCTCTGGATTCTGCCAGAGGTCTGCAGTACATTCATGAGCATACTGTGCCTGTATATATCCATCGCGACATAAAGTCAGAAAACATTTTGATAGACAGAAAGTTATGTGCTAAGGTACAATCTTGTTCAATAACTTTGGGGATCTTATTTCTACTTTTCTACTTGGGATTTTTGTGAGAGATCCTATATTACTTTTATTGCAGGTTGCAGACTTTGGTTTAACCAAGTTGATTGATGTTGGAAGTTCATCCCTTCTCACAGCTAACATGAAGGGCACATTTGGTTACATGCCACCGGAGTACGCATATGGCAACGTTTCTCCCAAAATCGATGTCTATGCTTTTGGTGTTGTTCTTTATGAACTAATTTCTGCAAAAGAAGCATTGATCACGGGTGGTGTACACGGTGCTCAATTAAAGGGCCTTGTGTCTTTGGTGATTCTTCACACCACTTTTCAATGACAACCTAGTAGTCTTACATAAACAATTAAGAATTGCATTTTCCCTTTCTTGTGTTTAATCTGTTAGTATATATGGCAGTTTGATGCAGCTTTTGATCAGCAAGATCCCACAGAAGGTCTTAAGAAACTGGTGGATCCTAGGTTAGGAGATAACTACCCAATCGATTCAGTTTGCAAGGTATGAGTTATCAGAAAGCATAAACACTTATTGTGTTTCTGATTTAAGAAACTTATGCCATTTTCGTTCTTGCAGATGGCACTACTTGCCAAAGCATGCACAGAGAGCGATCCACAACAACGTCCAAATATGAGTTCTGTTGTGGTTACTCTCACAGCACTTACTTCAAATAGTGAGGATTGGGATATTGCTTCCATCATTGAAAATCCAGCTCTAGCAAATCTAATGTCTGGGAAATAG