Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_00639 LG1 9611460 9613062 PREDICTED: B3 domain-containing protein REM20-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   tissue development, meiotic cell cycle process, meiotic cell cycle process, meiotic cell cycle process
Cellular Component   located in   nucleus, nucleus, nucleus, nucleus, nucleus
Molecular Function   enables   molecular_function
SNP Position Effect Amino acid change
C/T 9611500 missense_variant p.Arg307Lys
T/C 9611529 synonymous_variant p.Glu297Glu
G/A 9611577 synonymous_variant p.Ser281Ser
G/C 9611637 synonymous_variant p.Ser261Ser
C/A 9611656 missense_variant p.Arg255Leu
A/T 9611713 intron_variant
C/A 9611722 intron_variant
A/G 9611839 synonymous_variant p.Ile228Ile
G/A 9611875 synonymous_variant p.Ile216Ile
C/T 9611889 missense_variant&splice_region_variant p.Val212Ile
A/G 9611951 intron_variant
T/C 9611957 intron_variant
A/C 9611966 intron_variant
G/A,* 9612018 intron_variant
A/G 9612046 intron_variant
C/A 9612052 intron_variant
T/A 9612088 intron_variant
T/C 9612090 intron_variant
C/A 9612099 intron_variant
A/G 9612107 intron_variant
G/T 9612114 intron_variant
A/G 9612116 intron_variant
C/G 9612121 intron_variant
C/T 9612217 missense_variant p.Asp189Asn
T/A 9612299 intron_variant
T/C 9612342 intron_variant
G/T 9612407 missense_variant p.Thr165Lys
C/A 9612675 stop_gained p.Glu76*
T/C 9612712 synonymous_variant p.Lys63Lys
T/C 9612774 missense_variant p.Ile43Val
G/A 9612808 synonymous_variant p.Ser31Ser
T/C 9612895 intron_variant
C/T 9613012 synonymous_variant p.Lys17Lys

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_00639.1
MSTAAKEYFFKIFSPEKHSETMVIPSSFVKSRGLGRRTIPKDIILRNVSGRVWCVKTRIIGHKIYFGSGWKSFQEENCIRKADFMLFKYDGTNVFKVVILEQSSRCERREVEEDEVIHITEEEENENSEDSMMEDDEDIDDEDEYYDDDNYTEIEESEEEHMRSTNHRSRASNRDTEDPHLEDYEFDPQMYIQHENPYFEAKLYKNRPNELHVPANILRDTSLTFPEEIILSRCRCFQSEDTQRKELRKNHCGFSRQTQMYSKVTKVSEWQDGRVCIKGWTSFCTKNKIKENDVCICEIVSGKDQIVRTLQVHVLGARNG*


CDS Sequence:
>Vu_00639.1
ATGTCTACTGCAGCCAAGGAGTACTTCTTCAAAATCTTCTCCCCAGAAAAGCACTCTGAAACAATGGTTATTCCAAGTTCTTTTGTGAAGTCCAGAGGTTTAGGAAGAAGGACAATCCCTAAAGATATAATCCTCAGAAATGTTAGTGGTAGGGTTTGGTGTGTTAAAACTCGTATTATTGGACACAAAATCTACTTTGGATCGGGTTGGAAGAGTTTCCAAGAAGAGAACTGTATAAGAAAAGCAGATTTTATGCTTTTCAAGTATGATGGGACCAATGTATTTAAGGTGGTAATTCTTGAACAATCATCACGGTGTGAAAGGAGAGAAGTTGAAGAAGACGAGGTCATACACATCACCGAAGAGGAAGAGAATGAAAACTCTGAAGACTCTATGATGGAGGACGATGAAGACATTGATGATGAGGATGAGTACTACGACGATGACAATTATACAGAAATAGAAGAGAGTGAAGAAGAACACATGAGGAGTACAAATCATCGTAGTAGAGCCAGTAATAGGGATACTGAAGATCCTCATCTTGAAGACTATGAATTTGATCCACAGATGTATATTCAGCATGAAAATCCATACTTTGAAGCAAAACTGTATAAAAATAGACCCAATGAATTGCATGTTCCAGCAAATATCCTCAGAGACACGTCCCTTACTTTTCCAGAAGAGATTATTCTTTCACGTTGCCGATGCTTCCAAAGTGAGGACACTCAAAGAAAGGAATTACGAAAGAATCATTGTGGCTTCTCACGACAGACACAGATGTATTCCAAAGTAACAAAAGTGTCTGAGTGGCAAGATGGTCGAGTATGTATTAAAGGGTGGACAAGCTTTTGTACAAAGAACAAGATCAAAGAAAATGATGTATGCATATGTGAAATTGTATCAGGGAAAGACCAAATAGTAAGAACTCTTCAGGTGCATGTGCTTGGTGCTAGGAACGGATGA


Promoter Sequence:
>Vu_00639::LG1:9613062-9615062(-)
CTCTCTCACTCCAACATTTTCTCTATCATCCCTAGTGTAGCCCCAATTGAAAAAATCAGAAACACTTGCCTTTAAACAATTTGTCTTTCTAAAGAATTGAGTCATTGACATATTCACCTTGAGGCAAAGGTTCATTCAAGATCTCTTCAATTTCATCATCTTCACTAATTTCTCTAATTTCATCATCTGCATATGTTGAATCATCATCTCTAAAAAAACCCTCCAGGCCAATTACCAATTCTTTCGGATGTCATTATGCTGTTGAAAATTAGATAAAATTAGATAAGACAAAAATTATAAAATAAAAACTCATTATAAAATCATTTTTTGTAAGAAATTGTTTAACAACAAGTATTTCTGATTTTTTCCAGGTCAATTACCAATTCCTTTATGCTTGTGAAAATTGGATAAAATTAGATAAGACAAAAATTATAAGATCAAAACTCATTATAAAATCATTTTTTTTCAATTGGGGCTATAGGATGAAAGAGAAAAGATTGGAGTGAGAAAGATGAAAGAGAAAGGGTTGACAGGAATGAGAGAGGTGAGTAAGGGTTTGGTGATTTCTTTTTTTTTTTTATTTTAATTCTGAGAATGAAAATTATTAAAATACCCTTAACCTTAGAACTTAGAATCCATGATATATAAGGATATTTTTGTCTACTAAAACCCGGTACACATTGCTAAAATGTATCAACTGAAAAACAGGCGTACGCGCGTTAGCAAACCCCATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAAATCTAATGGTTAAACTTAAACTACGCAATAAACAAGAGTTAGCTTTACTGGTAGCAATCACAAACTACATTATCAGTTCTCTATTTATACTTATGGGTCTCTCTAAAATAAAATAAAAAATTCTAAAAAAATATTTTGTATTAATAGTAATAAGTAAAGAAATCTGAATATTTTTATCCTACTAAACCACTGTTCAACATTCCCATAAAACCTAGCTAGTACATATTGATACGCTGAAAACAAAGAACAGAGAAGAAATTATGTATTCATCTTGATATACGTTGGTAATTGATTTTAGAGTATTGAAGCCTTGAAAATCTGTAATAAAAAAACAATAAATTTGAAAACTAATTAGATTAATATTTTAATTATACAAATTTTTATTTTAAAATTAAATAATATGTATTATCATTAAAATAATTTTTTTTTTGTTAAATGGAGTGTTTTTATTTGATTGATGTTACAATATTTTTTTTTCTTGTTTTCATATGCCTTATTTCTTCAAAAGCTTGATGTCAGAGCATATCAAATGAATTTTCTTTGTAGTGTGAAATTATAGTATAAAACCAATTAAATTATTAATTAGAGGACTACTGATCTTATACATAGAGAATTATCATTTATTACATCCAAATCTGTATAAGGTTAATGTTTCCAGACATGTGTTTCCACCTTCTTGTCAGAATCTCAAAATAAAAATGAAAAAAAAAAGTCCTATTTATTCATCTGAGTAGGTTTATATAAAATGACTTTCAAACAATAACAAATGCAATAATCCTTTAGAAAACATGCAAGAGGTGAGGGGAAAAAATGGTTATTCTTGCAGTTGACACGTGGCACGGGACTTCCATAATCTTGGTACGGATATAGAATCAAATCGTATAATTTAAAGCCTGCAAGCTATAATTTTCATGTGTATTATCACGAAATTGCAACTTTTTGTTATCAGACGAATTTACTATATTAAGCAACAGTACTCAACACTTTAATTTTCTCATTTGATTAATATTCTTTTACATGGATATATTAAAAGAAAAAATGCAGTATTGGTAGCCCTCATGCTACAGTTATTGGTTTATTAAATGTTTTCTTGTAAAAATTATTTGGTTTGAATATCGGTGTCAAATTGTCAGGAGTAGCAATAGTTTTGGAGAACTCA


Gene Sequence:
>Vu_00639(-)
ATGTCTACTGCAGCCAAGGAGTACTTCTTCAAAATCTTCTCCCCAGAAAAGCACTCTGAAACAATGGTATACTTTCTTAGTTATATTTTTTGCAACCTACACTAATTACATGAAGATATAACATTGATGTTCTTATATATTCAGAATATTGTTGCACTTTGTGTACCAATGAAGTATTATATCTTAATTAACTTTGATCATCTTATTGTGTTTTTCCTAAAATTTCAGGTTATTCCAAGTTCTTTTGTGAAGTCCAGAGGTTTAGGAAGAAGGACAATCCCTAAAGATATAATCCTCAGAAATGTTAGTGGTAGGGTTTGGTGTGTTAAAACTCGTATTATTGGACACAAAATCTACTTTGGATCGGGTTGGAAGAGTTTCCAAGAAGAGAACTGTATAAGAAAAGCAGATTTTATGCTTTTCAAGTATGATGGGACCAATGTATTTAAGGTGGTAATTCTTGAACAATCATCACGGTGTGAAAGGAGAGAAGTTGAAGAAGACGAGGTCATACACATCACCGAAGAGGAAGAGAATGAAAACTCTGAAGACTCTATGATGGAGGACGATGAAGACATTGATGATGAGGATGAGTACTACGACGATGACAATTATACAGAAATAGAAGAGAGTGAAGAAGAACACATGAGGAGTACAAATCATCGTAGTAGAGCCAGTAATAGTAAGTTTAACTTTGTACTTTCAGAAAAAATAATGTCTAATAACTTTATGTGGAAAACATTCTTTTTTTTCTGCATTTCTTATGAGAGCATATCAATGATTCATTTATCTGGTTCAGGGGATACTGAAGATCCTCATCTTGAAGACTATGAATTTGATCCACAGATGTATATTCAGCATGAAAATCCATACTTTGAAGCAAAACTGTATAAAAATAGACCCAATGAATTGGTTAGAATTCTTATATACTCTCTTGTAGTGTTGTTCCTCTTTATTTGTTTGGAAATATTGACATTTTGACAATAGAGAACTGTTGTCAGATTAGTAATGTAAGTTCATTTACTTAGTTTATGTTCTCACCTTCTAAATCTCACTGCTAATTGAATTACCTATAAGTAGATGTTGAAACAAAAATTTACATTCAATGATTTTTTATTTTTATTTTTCTCACTTTAACCCTTGTTTTTATTGCATGTTCTTGCTTTGCAGCATGTTCCAGCAAATATCCTCAGAGACACGTCCCTTACTTTTCCAGAAGAGATTATTCTTTCACGTTGCCGATGCTTCCAAAGTGAGGTATACTTTTTAGTAGTAACTTACCATTTTGATAATTATGTATGTGTTAGCTGTTTGTCTTGAGAATCTGAATTTATAGTTGTGTATACTTTTTTTGGTTCAGGACACTCAAAGAAAGGAATTACGAAAGAATCATTGTGGCTTCTCACGACAGACACAGATGTATTCCAAAGTAACAAAAGTGTCTGAGTGGCAAGATGGTCGAGTATGTATTAAAGGGTGGACAAGCTTTTGTACAAAGAACAAGATCAAAGAAAATGATGTATGCATATGTGAAATTGTATCAGGGAAAGACCAAATAGTAAGAACTCTTCAGGTGCATGTGCTTGGTGCTAGGAACGGATGA