Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_00617 LG1 9390864 9391409 PREDICTED: LOB domain-containing protein 21
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   response to light stimulus, meristem development
Cellular Component   located in   nucleus
SNP Position Effect Amino acid change
T/C 9390965 synonymous_variant p.Ser34Ser
C/G 9391031 synonymous_variant p.Leu56Leu
C/T 9391067 synonymous_variant p.Val68Val

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_00617.1
MKGYEPRSSSSCAACKFLKRRCIPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILIEVPEEQREDTVNSLAYEAEARLRDPIYGCIGAIALLQRKMVELQHDLAIAKDRLARYAAAATTPSAAIATSNNSFNSHVSLPPFPEFFSCNDFSDNFCHNSSSQSPPLTRHEMVDDFIQIPYIL*


CDS Sequence:
>Vu_00617.1
ATGAAGGGTTACGAGCCACGTTCCAGTTCCTCTTGTGCTGCCTGCAAGTTCTTGAAGCGAAGATGCATACCCAATTGTATATTTGCACCTTACTTTCGCTCTGATGAGTGCAAGAAATTTGCCAAGGTGCACAAGGTTTTTGGAGCCAGCAATGTCAGCAAGATCCTCATCGAAGTTCCCGAGGAGCAGAGAGAGGACACCGTCAATTCTCTTGCTTATGAAGCAGAAGCCAGGCTCAGAGACCCCATTTATGGATGTATCGGTGCCATAGCTCTTCTCCAGAGGAAGATGGTCGAGCTTCAACACGACCTTGCCATTGCTAAGGATCGTCTCGCTCGTTATGCTGCCGCTGCCACCACTCCTTCCGCCGCCATCGCCACCTCCAACAACTCCTTCAATTCCCATGTCAGTTTGCCACCCTTCCCTGAATTTTTCTCTTGCAACGATTTCAGTGACAACTTCTGCCACAACTCTTCCTCTCAATCTCCGCCATTGACCAGACACGAAATGGTCGATGATTTCATTCAAATCCCTTATATATTATGA


Promoter Sequence:
>Vu_00617::LG1:9388864-9390864(+)
ATTTAAATTTGTTTTAGTCAATTTTTATGCTTTTATTTTAGAAAATAAATGGTACAATGTGCTTTTAAATCTGACAATATTTATCATGTTTACTTTAATAACAAATCTACGTGGAACTACTATAGAATGATAGTTAGTGTTACATCAATTAAGAGATCATAATTGAAAATGTATTCAAAAGACAATTTGTCTCAAAAAGCCTCATGTGCCTAACTCTAGTCTACAAAGAACATCAAATAAATTAAATCGGAAAAAAGATTATTGGATTCTTATTCAACTTTAGATTGAATGATCTCTTTTTATCCAATAAAATATTTTAGTTTTTTTCTTCATATTTGTATCTTTTTCACATTTCAAATGATGTTACTTTCCATTATTTTTTACTTATCCATAAGCTTAAACATAAAAATAGTTAAATATTTACATGATTTGAGTTTGAAGTTAAACAAATCACTTATCTAAATTATTGCGATTGGTTGCGCTCGTAGAGTAAAAAGTTTTTCTTTCTTTAGGCTATTATTTTTCAATTACATTTCATTATATATAACATAAATAAGATTCTATCCCAAAACTTTAATTTAAAGAACTACAGAGAATGAAAGTTAACATCCAATAGAAAAGTTTTCGGATTATTTAAAAACCGATTTTTTTTTTTAAATTTCATTTTTATTTTTACATATGATTTATATATATATATTCTAAATTGGTCTTATTTTTAGTCGATGAGACTTCTAATATTAATAGGTGGTCTGATAGGTTAAGAAGTAAACTTTAAACTTAAGTCAATTTCATAAGATGAAATTTACAGTCATTTATATACTCTAAATTAATTTTATAGAAGACTTCTAACAATATAATAAAAAATAAAAAATTGTATATATAAAAATGATTGAAACCTTAAAGTAATATTTGATATTTATGATAAAGAAAATAGAATTTGAATAATTTGAAAGTGTGATGGAAGTCGGTACAAGGGTGGGGCTACGATGAGTCCACCTAACAATGCAATCTGCAATTATTATATTAGATTCCATAATGAGATAGGAAATCTTTACAGTTGCACCCGCACAGTGATGTGCAATGATAGAAAGTGGTTATACCACGTTTACGACTCCGTTTAACCTTCCAACATCTTTATTCCCATTACTATTCATTCTTCTTTTCTTCCTTCTTATTATTTTCTCTATAAAATCCCAAACACGATCAATCCAATAACAATAAAGTCAGCTTTTCCCCACGCTTACAAAATTGCAACTCAATCACTTCAACTTTTTTTTTCCTTTTTTTATTCTAAACAAATAATTTTAACTGTAAAAACATGTTAATAAATTTGGTAATTATTAAAGCTGACGGCTTGTATTTCTTGTTTTGGAATTTTAATGACGTGATTAAGAATTAATCTGGGGGATGTAATGTAACAGTCGGTGAGATTGATAAGGGAGTAAAAATAACGGAAAAAACGAAATATCTAATGATATAGAAAGCATAAAAACAACATTTCACTGGCTTTAATTTTGGCTCCACTATGTTGTCCTGAAGATTCCAACTACATTTAAAGTACTCAATTCGATCTTATTGCTTTCTTTCTAATGACCATACCTCTCACTGCCAAGGGATAATTTTGCTTTTATTGAGAATATTTCTTTTCTTCAATCAATCAAAATATCCTCATCTTTATTCATGAACTATCATATCTAACTTGAAAACTACCAACTCATACCACCCATTGTCCACATGAATCAATTATTTGGACCTACTTTTGCACTCCCAATTTGAATGGATGCCATAAAATAAAAAAAATAAATAAAATGATGAACAAATGAAAATAAATGCATTAAAAGAACAACACTGGCCCATGCAAGTCCCTAACCTGCGACCTAGCTGAGCCAATGGCCATGGTAACATGCTTTGCCTTAAATACCAATTCTGCAAAATAACTATATAGAGAAAAACCATACACTTATAACTGCAAACTTTGAAGGAATATTTTCAGAGAGGCA


Gene Sequence:
>Vu_00617(+)
ATGAAGGGTTACGAGCCACGTTCCAGTTCCTCTTGTGCTGCCTGCAAGTTCTTGAAGCGAAGATGCATACCCAATTGTATATTTGCACCTTACTTTCGCTCTGATGAGTGCAAGAAATTTGCCAAGGTGCACAAGGTTTTTGGAGCCAGCAATGTCAGCAAGATCCTCATCGAAGTTCCCGAGGAGCAGAGAGAGGACACCGTCAATTCTCTTGCTTATGAAGCAGAAGCCAGGCTCAGAGACCCCATTTATGGATGTATCGGTGCCATAGCTCTTCTCCAGAGGAAGATGGTCGAGCTTCAACACGACCTTGCCATTGCTAAGGATCGTCTCGCTCGTTATGCTGCCGCTGCCACCACTCCTTCCGCCGCCATCGCCACCTCCAACAACTCCTTCAATTCCCATGTCAGTTTGCCACCCTTCCCTGAATTTTTCTCTTGCAACGATTTCAGTGACAACTTCTGCCACAACTCTTCCTCTCAATCTCCGCCATTGACCAGACACGAAATGGTCGATGATTTCATTCAAATCCCTTATATATTATGA