Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_00569 LG1 8840736 8841386 PREDICTED: WUSCHEL-related homeobox 5
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   positive regulation of stem cell population maintenance, response to auxin, maintenance of root meristem identity, maintenance of root meristem identity, response to auxin
Cellular Component   located in   nucleus
Molecular Function   enables   protein binding, protein binding, sequence-specific DNA binding, protein binding, protein binding, protein binding, DNA-binding transcription factor activity
SNP Position Effect Amino acid change
T/C 8841015 intron_variant
T/G 8841017 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_00569.1
MDEGMSGFCMRSGSVRGKSGSTASSATGTKCGRWNPTTEQVKLLTELFRSGLRTPSTDQIQKISTQLSFYGKIESKNVFYWFQNHKARERQKRRKVSFDDKDVVIRRQNSFNTSSQSLADMYRVSEPDRVIETLQLFPINSFGESEPENLRLHGNECRDSSTMFSCTMDEEIEHPPLELRLSFL*


CDS Sequence:
>Vu_00569.1
ATGGACGAGGGCATGTCAGGCTTTTGCATGAGATCAGGAAGTGTCCGTGGGAAAAGTGGAAGCACTGCTTCTTCTGCCACTGGCACCAAGTGTGGGCGTTGGAATCCCACAACCGAACAGGTTAAACTTCTAACTGAACTCTTCAGGTCAGGGCTCCGAACCCCAAGCACTGACCAGATTCAAAAGATCTCCACTCAGCTCAGCTTTTATGGTAAGATAGAGAGCAAGAATGTCTTCTATTGGTTTCAGAATCATAAGGCCAGAGAAAGACAGAAGCGCCGCAAGGTCTCCTTTGACGACAAGGATGTCGTCATTCGTAGACAAAACTCCTTCAACACTTCCTCACAAAGTCTTGCTGATATGTATCGAGTTTCAGAGCCAGATAGAGTGATTGAGACGCTTCAACTCTTTCCCATAAACTCCTTCGGTGAATCTGAACCGGAGAACCTGAGGTTACACGGAAATGAATGTAGGGATAGTAGTACAATGTTTTCATGCACGATGGATGAAGAAATAGAGCACCCACCATTGGAACTGCGCTTGAGCTTTCTGTAA


Promoter Sequence:
>Vu_00569::LG1:8841386-8843386(-)
GTGTCTAGAATTATTCCCCCACGTCTTAGAAAGAAGATTCCTATGAACTCAAGTCAACTCAGTATAGGTACTGTTTGGTTTAATTTATTTTAAAATTATTTTAAACAAGTTCGAATGAAACATTTTTATTTTAATTTCCATAATCTAACACATTATATTCATTTAAAAAAGTACTTGGAGATAATTTGAACCAAATTTTTTTAAAAACACTAATAATATTTAACTTTAAATACAATCATATATTTAATAATAATTTTAAAGTAAATACTAAAATTTATAAAATAAATAATTAAAGAGAGAATACTTTGATCATTTTAGAAGAAAAAAAAAGAAATATGCTAAATAAAACTTTTAAAAGTAGTCAAAAGTAGATCTTTCGAAAAGAAATAAATTTTATCACGTAGTTTTAAAATACTTAATAATTTTATACCTATTAAAAGATATAATTCAAGTATTAAGTAATGGTAAAATCATACGTCATAAAATGAAAGGAAGTGTTGGAAAGGCTTATCTCTTTATATTACAATAGTTAAACATATAGAAATTCGCATATTATATTTAATTTTATTAAAGCTAAAGGAAAACTTCAGAAAATAAAATACAAAAAATATGATTTTTAACTGGAAAAAAAAACATTGGTTAAGTTTGTAATAAAATTTCGTTCTTAAAGCTTTTTTAATAAAGAATCTTTTCATTTTTAGTCTAATTACAGTTCTGTATTTTATTTGTTAGATTGAATTCTCACTTTGCAGCAAATGTAACATTAACTATTTATACGATCAATACAAGCATGCTAGGAAACTTTTTGACACTAGAAAGTAACTTTTAAATTAAATTACACTCAAATATGAACTAAAGACTTTTCTTAGCATTAATATTTGTTTTTGATCTGTCCAGTTAAACGAATCACCTACAAGTGCTTAACTTAAGTTCAATTTAGGCACGGGGATTAATTAGCAATAAAGATTTTACACTAATTTTATATAATTAAAATGTTGAGTGTTTGTTGAAGATTTCACACTTATTAGTAACATAGTCAAAATATTGTGTACAAGTGAATTATGCTATATTCTATACCAGCTTTTGGAGTTGATAGATGCCAAACTCATTATAAGATAAATAGTATAATACAACGTTAACTTTTAACTATTCTCCATGAACTTTAGCGGGCAACCGTTTCTTTTTAAAAGCAAAGTTTGGCTTAAGTCACATGTCTTGATGAAATTGGATTAATTTGACAATTAATGCTGTCGAAGCACTAAGCATCAGAGATAAGAGACAATGAAAACTACACAAATATATATATATATATATATATATATAACAGTATAACTTTTAGGAGTAAGTGCACACTTTACTGAAAAACACACTGTGTTGTGTCTAAGAAGAACTCGAGGAAATAAAAATAAATATAAACGAAGAAGAATCATATAAAATATGGTTAAACTTCAATTAGTGAAACTTGAAGTTCGCTGTCCCAAGGCCGAAACGTTGAACAACGGCTGCTTTTGCGCATGACTTTCTATTTTTTTATTGCACCACTCTAAATGAAACAGATCAAATACACATAATCTGGTATATTTTTTATACGCATTTTGATGTTATTTTTCAATGGAGACACAGCAAATATAAAAATCATGGGAAAATATAACAGTTATGCCCTATTTTATAGGTGTATAACTGTTCATTGTTCAAAATAATAACAATCATGCAGTGTTTTCATGAAAAGAAACACAAAGGAACATAAAAAATGTCCGTGTAATGGTCCCTCATGTTCTCTAAATTCAAAGAAGACAGAATGTTGATTGTAAGATCTGTGATCCCCACAAAGCAATGCAACAAAAAATAAAAGGACAAAGATTTTGACATTAGATTAATGAGTTAGGGTATTATATATATATATGCACACGGATTGGGATCTTTATGGTTCAGATAATCTCAGAACTGATAAAGTTGAGTTGAGAAGCAGAGAGAGAGAGAATCATATCTGGAAGGAAAAC


Gene Sequence:
>Vu_00569(-)
ATGGACGAGGGCATGTCAGGCTTTTGCATGAGATCAGGAAGTGTCCGTGGGAAAAGTGGAAGCACTGCTTCTTCTGCCACTGGCACCAAGTGTGGGCGTTGGAATCCCACAACCGAACAGGTTAAACTTCTAACTGAACTCTTCAGGTCAGGGCTCCGAACCCCAAGCACTGACCAGATTCAAAAGATCTCCACTCAGCTCAGCTTTTATGGTAAGATAGAGAGCAAGAATGTCTTCTATTGGTTTCAGAATCATAAGGCCAGAGAAAGACAGAAGCGCCGCAAGGTCTCCTTTGACGACAAGGATGTCGTCATTCGTAGACAAAACTCCTTCAACACTTCCTCACAAAGTAAGTATATATTATTACATATATTTCGATAACTTTTTCATTTGTAATGCGTAACTTCATTTTAAGTGTTTTTGAGAGTTTTCCTTATTGTTGTAGGTCTTGCTGATATGTATCGAGTTTCAGAGCCAGATAGAGTGATTGAGACGCTTCAACTCTTTCCCATAAACTCCTTCGGTGAATCTGAACCGGAGAACCTGAGGTTACACGGAAATGAATGTAGGGATAGTAGTACAATGTTTTCATGCACGATGGATGAAGAAATAGAGCACCCACCATTGGAACTGCGCTTGAGCTTTCTGTAA