Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_00411 LG1 6999748 7003030 hypothetical protein
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   defense response to bacterium, protein phosphorylation, defense response to bacterium, defense response to bacterium, protein phosphorylation, protein phosphorylation
Cellular Component   located in   nucleus, extracellular region, plasma membrane, plasmodesma, plant-type vacuole
Molecular Function   enables   identical protein binding, protein binding, protein binding, protein kinase activity, protein kinase activity, kinase activity, protein binding, protein binding, protein binding, protein binding, protein binding, protein kinase activity
SNP Position Effect Amino acid change
T/C 6999817 5_prime_UTR_variant
G/T 6999910 5_prime_UTR_variant
A/C 6999950 5_prime_UTR_variant
G/C 7000205 missense_variant p.Ser50Thr
G/A 7000222 missense_variant p.Gly56Arg
G/A 7000231 missense_variant p.Gly59Ser
T/A 7000303 missense_variant p.Ser83Thr
G/A 7000332 synonymous_variant p.Gln92Gln
C/G 7000347 synonymous_variant p.Arg97Arg
G/A 7000384 missense_variant p.Val110Ile
T/C 7000392 synonymous_variant p.Leu112Leu
A/G 7000404 synonymous_variant p.Arg116Arg
C/T 7000437 synonymous_variant p.Gly127Gly
T/G 7000459 missense_variant p.Ser135Ala
A/T 7000523 missense_variant p.Lys156Met
A/T 7000528 missense_variant p.Asn158Tyr
T/A 7000590 synonymous_variant p.Pro178Pro
T/A 7000631 missense_variant p.Phe192Tyr
C/A 7000638 synonymous_variant p.Ser194Ser
G/A 7000656 synonymous_variant p.Pro200Pro
A/T 7000842 missense_variant p.Arg262Ser
C/A 7000983 missense_variant p.Ser309Arg
T/C 7001028 synonymous_variant p.Asn324Asn
A/T 7001160 synonymous_variant p.Thr368Thr
A/C 7001232 synonymous_variant p.Leu392Leu
T/A 7001462 intron_variant
A/G 7001651 intron_variant
G/T 7001762 intron_variant
C/T 7001787 intron_variant
G/T 7001853 intron_variant
T/C 7001947 intron_variant
G/T 7002046 synonymous_variant p.Gly423Gly
T/C 7002319 synonymous_variant p.Tyr514Tyr
G/A 7002602 missense_variant p.Glu609Lys
G/T 7002614 missense_variant p.Gly613Trp
C/T 7002790 3_prime_UTR_variant
T/C 7002859 3_prime_UTR_variant
A/T 7002889 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_00411.1
MKSAQVKEAILFTLLTCVFAIADSDLASDRAGLVSLRSALGGRTLLWNTSQTNPCGWTGVTCTNDRVTLLRLPAMGLSGSLPSGLGNLTELQTLSLRFNALTGPIPADFVNLKALRNLYLQGNFFSGEVPDAVFSLQNLVRLNLGNNNFSGEISPKFNGLTRLSTLYLERNNFTGSIPDLTVPPLDQFNVSFNSLTGPIPNRFSSLDQTAFLGNSLCGKPLQSCPGTEEGKSKLSGGAIAGIVIGSVVGLLLILLLLFFLCRKRSEKNDESVSTGKRDVGGEVSREKSAESGNSGSAVAGSVEKSDVQSSGGGDKSLVFFGNVNRVFSLDELLRASAEVLGKGTFGTTYKATLEMGVSVAVKRLKDVTAAEREFREKIEQVGKMVHHNLVPLRGYYFSRDEKLVVYDYMPMGSLSALLHANGGVGRTPLNWETRSAIALGAARGIAYIHSHGSTSSHGNIKASNILLTKSFEARVSDFGLAYLALPTSTPNRVSGYRAPEITDARKVSQKADVYSFGIMLLELLTGKAPAHSSLNDEGVDLPRWVQSVVEGEWNTDVFDMELLRYQSVEEEMVKLLQLALECTAQYPDKRPSMDVVASKIEEICHSSLEKEEGKNHDFKDPDNGFSQQYYSVDSGVSQA*


CDS Sequence:
>Vu_00411.1
ATGAAGTCTGCGCAGGTCAAAGAAGCGATTCTCTTTACTCTCCTGACGTGCGTCTTCGCCATTGCAGATTCGGATCTAGCTTCGGACAGAGCCGGGCTAGTGTCACTCCGAAGCGCGTTGGGGGGACGCACGCTGCTATGGAACACCAGCCAAACAAACCCTTGCGGGTGGACCGGCGTCACCTGCACCAACGACAGAGTAACCTTACTGCGCCTACCAGCGATGGGTCTCTCCGGTTCTCTCCCCTCCGGTTTGGGAAACCTCACCGAACTGCAGACGCTCTCCCTCCGCTTCAACGCTCTAACCGGACCAATCCCCGCGGATTTCGTCAACCTTAAAGCGCTGCGAAACCTCTATCTCCAAGGAAACTTCTTCTCCGGCGAAGTTCCCGATGCGGTATTCTCGTTGCAGAACCTCGTGAGGTTGAATTTAGGTAACAACAATTTCAGCGGCGAGATTTCTCCCAAGTTCAATGGTCTCACTCGTTTGTCCACTCTCTATCTCGAACGCAACAATTTTACTGGTTCAATCCCTGACCTTACTGTTCCGCCTCTGGATCAGTTCAACGTCTCGTTTAATTCCCTTACGGGTCCCATTCCGAACCGGTTTTCGAGTCTGGACCAAACCGCTTTTCTCGGGAACTCACTCTGCGGGAAGCCCTTGCAAAGCTGCCCCGGAACCGAGGAGGGAAAGAGTAAATTGTCCGGTGGTGCCATTGCGGGTATTGTGATAGGTTCCGTGGTTGGTTTGCTGTTGATTCTGCTGCTTTTGTTCTTTTTGTGTAGAAAAAGGAGTGAGAAAAACGATGAAAGTGTGTCAACAGGGAAGCGTGATGTGGGAGGTGAAGTGTCTCGTGAAAAGAGTGCTGAGAGTGGGAATTCTGGTTCGGCGGTGGCAGGTTCGGTGGAGAAGAGTGATGTTCAAAGCAGTGGTGGTGGAGATAAGAGTCTGGTGTTTTTTGGGAATGTGAATAGGGTGTTTAGTTTGGATGAGTTGTTGAGGGCTTCTGCGGAAGTGTTGGGAAAAGGAACGTTTGGAACGACTTACAAGGCGACTTTGGAAATGGGGGTGAGTGTGGCGGTGAAGAGGTTGAAGGATGTCACAGCCGCAGAGAGGGAATTCAGGGAGAAGATCGAGCAAGTGGGGAAGATGGTTCATCACAACTTGGTCCCACTAAGGGGTTATTACTTTAGCAGGGATGAGAAGCTTGTTGTCTATGATTACATGCCTATGGGAAGCTTATCTGCTCTCTTGCATGCAAATGGTGGGGTGGGGAGGACTCCACTGAATTGGGAAACAAGGTCTGCCATTGCTCTTGGTGCTGCTCGTGGGATTGCATACATTCATTCTCATGGCTCAACATCCTCTCATGGGAACATCAAGGCATCGAATATCCTTCTGACGAAATCTTTTGAAGCTCGTGTCTCTGACTTTGGCCTTGCTTACCTTGCTCTTCCAACCTCTACGCCAAACCGTGTTTCTGGTTACAGAGCACCAGAGATCACTGATGCGCGAAAAGTATCCCAAAAAGCTGATGTCTATAGCTTTGGCATCATGCTTCTGGAGCTGCTTACAGGGAAGGCTCCTGCTCATTCTTCACTGAATGACGAAGGGGTGGACCTCCCAAGATGGGTTCAATCTGTGGTTGAAGGTGAGTGGAACACTGATGTATTTGACATGGAGCTTCTGAGGTACCAGAGTGTTGAGGAGGAAATGGTGAAGCTCTTGCAGCTTGCCCTTGAATGCACTGCACAATATCCTGACAAGAGACCTTCAATGGACGTGGTAGCAAGCAAGATCGAAGAAATTTGCCATTCTAGTTTAGAGAAAGAGGAAGGGAAGAATCATGATTTTAAAGATCCTGATAATGGATTTTCGCAACAATACTACTCTGTTGACTCGGGTGTGTCACAAGCTTGA


Promoter Sequence:
>Vu_00411::LG1:6997748-6999748(+)
TGCCTGAACGGTTATCGGAGCAGAGAAGAGTGAGTTACAGTAGAGAGAAGGGAAGTTTCTAGAGAGAAGAAGGAGAAATGGAAAGTCAGAGTTTGGAAGGAGAAGGTGCGTGCGGAAGAGAATGGGCAGGGTTTTCAGAAAAATTCATTTTTCGTTTACCCCACGTCCAAACGGTCGTGCACTCTCCTGTTGACACCTGCACTCCACTAACTGACTTCCGAATCTTCCATTATTGACACTTGGCGTTAGTGCGTCAGAGTTGAGTGCGTTTTTAATGCATCTGAGCAGGGTTTTGGAGTGCATTTAATGGGATTAAACAGGTGGGGTTTGGGTGCATTTAACGAGGCCTAACACCATGTTTAGTCACTAATCTCCTAAAAAATAAACAAATAAATAAATAAATTATAAAAGGTACAGAGACAAAATAGATTATGGTTTTTTAGAAAGATTATAACTTTTACAAAATAAAACTCGATTAACTTATTTTTCTCTACTTATAGTCTATTTTTTTATAATAAAATAATCAAATTAGCTAAATCTAACTTTAATGAATTCATTGTCATTGATAAACCCACAGTACACACGTAACATCTTTTAAAGATTATTTTATGGAAGTTTTAAGAATAAAATTACCTTACCTCGTTTTTTAGTAGAGATATTTTAAAGGTGAAAAATATCTTCATTTTCATTTAACATGAATTATTAACAACTTTTTATGCATATTCATAAAATTGTGTTTTTTATAATTAGGTTATAAAAATATTTTCTCACGATTTTTAATATTTTAACGTTGTAACATGACAAACTATCCATTGTTATCAGTTTTAACATTTTAACGTTATAACATGATTACTTTTATGATTATGATTAGCGTTAGAACATTTTAATATATTTTTAACATTCTAATTTTTATTTCATAAACTTAGTCGTCGATAAATAATAATAATAATAATAATGGAGTTTTTTTAGCATCAATTGTGTGATACTTAAATATGTAATTGTTATTAATTTACACCAAAAAAAATTAAATCAATTTTAATGTAGTATCAGAAAAATATTAAATTTGATTTGAAATAGTAAATGAATATATACACTATAATAATATAAAAAAAAATGCAAGATACATCGTTGTAGTGTACTTATTACTGTTAATAATAACGTTGCCTGTTTTTAATTGGCATAAAATGAAAAGAAACAGCAACATACAATTTTATATATAAATAATACTTTCTAAAGATAAATATAAAAAACCTACTATTTAAGGTATGAGATATAAATTTTGAATAAGATATAAAATTTGGTTGATATTTTGAATATCTTATTTTAAGAATTTGTACATCAATAATTTAAAAAACGCTTTTAAGAATTTTGACCGGCAGCGAAAACGCCTCTACCCTTTCCAATGAAACAAAAGGCAAAAAGAAAACAAGAAAATTATTTCCGTCGTCGTAGAAATCTGTAATTAAAAAAAAAGATTATTTCATTAGGTAAAATATATTTATAAAAAAATTACTGCAAAGGAAACTGGTCCATCCCAAGAAGCCAAAGGAAAGGTTAGTAAATGGGATTGTCCCTTAACCGTTGCGTTTGGGACCACCATTCTAAATTTAAAGAAATGCAAAAAATATAATAACAATTTAATTGTTCTAATTAATATTTCTTAACTGTTTTTGTTTAGCGAGAATTATTTATTTTTATTATATTCAAACAAATCATATTTCGCTCTGTAATATTTAAAGAAAAACAAACTACATTAAACTTCACGAACAGCTAGTCAAACAGCAAAAAATAAAAAACGATATTTTGAAATACAAGACCGAAATTAAAAAAAAAGGGAAAAAGAAAAAGAACATAAAATAAGGAACAGAGAATCCAGCTAGGAGGGCAGCTACAAATGAGAGTGATTAGAAGTTATAACTGGACCACCACTCGAACAAGTGGGTCCCACTGGGAACCTTCCCTCACTTCTTTTTAATCTTAAAACAAACACCGGTCACCCG


Gene Sequence:
>Vu_00411(+)
GCGCGACACACCGGTCGTTCGTTGCACGTGAACGTACTCTAACCCTTCTCTCGTCCCTCTCGAAAACATTTCTATTCCTTCTCTCGCAAACGCAACACCCTTTGCTATAATACGTGACACCCACCACCTTCTCTCGCACCACTCACGCTTCTCACGACACTGGTTTTTTTGCTTTTTCTTTTTTCTGAAAAACATTCTGAGCACAACAGAACGGAACAGAGCAGAACCACACTCGCATCCATCGAGGTTCCCATGGCGCCAATTCCTTAGATAACTAACTCCTTTCCTCGAACAACTCGAACTACCAAAATGAAGTCTGCGCAGGTCAAAGAAGCGATTCTCTTTACTCTCCTGACGTGCGTCTTCGCCATTGCAGATTCGGATCTAGCTTCGGACAGAGCCGGGCTAGTGTCACTCCGAAGCGCGTTGGGGGGACGCACGCTGCTATGGAACACCAGCCAAACAAACCCTTGCGGGTGGACCGGCGTCACCTGCACCAACGACAGAGTAACCTTACTGCGCCTACCAGCGATGGGTCTCTCCGGTTCTCTCCCCTCCGGTTTGGGAAACCTCACCGAACTGCAGACGCTCTCCCTCCGCTTCAACGCTCTAACCGGACCAATCCCCGCGGATTTCGTCAACCTTAAAGCGCTGCGAAACCTCTATCTCCAAGGAAACTTCTTCTCCGGCGAAGTTCCCGATGCGGTATTCTCGTTGCAGAACCTCGTGAGGTTGAATTTAGGTAACAACAATTTCAGCGGCGAGATTTCTCCCAAGTTCAATGGTCTCACTCGTTTGTCCACTCTCTATCTCGAACGCAACAATTTTACTGGTTCAATCCCTGACCTTACTGTTCCGCCTCTGGATCAGTTCAACGTCTCGTTTAATTCCCTTACGGGTCCCATTCCGAACCGGTTTTCGAGTCTGGACCAAACCGCTTTTCTCGGGAACTCACTCTGCGGGAAGCCCTTGCAAAGCTGCCCCGGAACCGAGGAGGGAAAGAGTAAATTGTCCGGTGGTGCCATTGCGGGTATTGTGATAGGTTCCGTGGTTGGTTTGCTGTTGATTCTGCTGCTTTTGTTCTTTTTGTGTAGAAAAAGGAGTGAGAAAAACGATGAAAGTGTGTCAACAGGGAAGCGTGATGTGGGAGGTGAAGTGTCTCGTGAAAAGAGTGCTGAGAGTGGGAATTCTGGTTCGGCGGTGGCAGGTTCGGTGGAGAAGAGTGATGTTCAAAGCAGTGGTGGTGGAGATAAGAGTCTGGTGTTTTTTGGGAATGTGAATAGGGTGTTTAGTTTGGATGAGTTGTTGAGGGCTTCTGCGGAAGTGTTGGGAAAAGGAACGTTTGGAACGACTTACAAGGCGACTTTGGAAATGGGGGTGAGTGTGGCGGTGAAGAGGTTGAAGGATGTCACAGCCGCAGAGAGGGAATTCAGGGAGAAGATCGAGCAAGTGGGGAAGATGGTTCATCACAACTTGGTCCCACTAAGGGGTTATTACTTTAGCAGGGATGAGAAGCTTGTTGTCTATGATTACATGCCTATGGGAAGCTTATCTGCTCTCTTGCATGGTAGTACCCCATCTTTCATACTTGGTTGTTATTTTTGGACAATAGTGTCTCTCTATTTTCTATCTTGGTGCCATTTCTTTTGTTAAATCAGGTGAATGATTGTGGCTGTTCGTGTGTCTACTCAATGCTAGCTCTTAGGGTGGCTACTTGTTGTTTTTATGTTTCTCAATGTTTTCCTTGTTGTTGCTGCTTATCATTCAGTTTTGTAATGTACTTCATGGCTTGTTTTTTAGCTCTGCTAAATGTCTTGTCTAGAGTGTGGCTTTATTTCATCACATCTTCTGCCCGTCGGATTTTAGTTTACTTTGTGAATTAAGGGGTTTTGTCTAGAAATAAATTTGATTTGATATTCTAGTTTGGACAGTGGATGTCATTGCATACATTACCTACACTATGTCAAAGGGAGATAGAATGTTGCATCAAGAGTGAAGTCTGATGTCTAAAATAGTATCTGAGAAAGCTGAAGTTTATGCCTCTAAATTAGGTCTTAAGATAATCCCTAATGTTCCAAAAGAAAATTTGTTGTCAGTAAATATTTGCTTTAAGGATTGTGATTTCTAACTATAACACTCATAATTCTTCTGAAGTATTTAGTGATTGCTTTGTCAAACACTTCACTTGTGAATTTAGTATGAGGCTTCTACATTTGATAAAACGAAATGTAGGCTGCATTTGCAGTCAAACACTTTATGATCTGACATATTTGTTTTTGTTGTTGCAGCAAATGGTGGGGTGGGGAGGACTCCACTGAATTGGGAAACAAGGTCTGCCATTGCTCTTGGTGCTGCTCGTGGGATTGCATACATTCATTCTCATGGCTCAACATCCTCTCATGGGAACATCAAGGCATCGAATATCCTTCTGACGAAATCTTTTGAAGCTCGTGTCTCTGACTTTGGCCTTGCTTACCTTGCTCTTCCAACCTCTACGCCAAACCGTGTTTCTGGTTACAGAGCACCAGAGATCACTGATGCGCGAAAAGTATCCCAAAAAGCTGATGTCTATAGCTTTGGCATCATGCTTCTGGAGCTGCTTACAGGGAAGGCTCCTGCTCATTCTTCACTGAATGACGAAGGGGTGGACCTCCCAAGATGGGTTCAATCTGTGGTTGAAGGTGAGTGGAACACTGATGTATTTGACATGGAGCTTCTGAGGTACCAGAGTGTTGAGGAGGAAATGGTGAAGCTCTTGCAGCTTGCCCTTGAATGCACTGCACAATATCCTGACAAGAGACCTTCAATGGACGTGGTAGCAAGCAAGATCGAAGAAATTTGCCATTCTAGTTTAGAGAAAGAGGAAGGGAAGAATCATGATTTTAAAGATCCTGATAATGGATTTTCGCAACAATACTACTCTGTTGACTCGGGTGTGTCACAAGCTTGAATACAGAAATCAAGAAATACCCTTTTATATTTCATCATTGCCTCACCCAAGCTTGAATATAGAACTGAAGAAAGACCTCATTGTTTTCATATCTGGCCTGTTTTTGGCATGCATATTACACAACAAGTGTTGTTTGTTTGTTGGTTTATTCATTGAGGGATTATAGAAACCTGCCGTTTATGTCCTTTGTCAACCCTTTCACTTCCTTATTCTACTCAGTCCCTTTTGTTATTCTGAGTCTTGGTTTTTGGGGGTTTCCATATCCCCAATTTGTTTACTACTTCATCATATTCCTTAAACGACGCTTATTTTATTTATTTTCATTTTTACAGG