Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_00380 LG1 6635633 6637732 PREDICTED: L-type lectin-domain containing receptor kinase VIII.1
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   protein phosphorylation, defense response to oomycetes, defense response to bacterium, defense response to oomycetes, defense response to bacterium, defense response to oomycetes, protein phosphorylation, protein phosphorylation, defense response to bacterium
Cellular Component   is active in   plasma membrane
Cellular Component   located in   nucleus, plasma membrane
Molecular Function   enables   transmembrane receptor protein serine/threonine kinase activity, kinase activity, transmembrane receptor protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity
SNP Position Effect Amino acid change
G/A 6635853 downstream_gene_variant
A/G 6636020 downstream_gene_variant
C/A 6636024 downstream_gene_variant
T/A 6636405 missense_variant p.Asp443Val
A/G 6636409 missense_variant p.Tyr442His
C/T 6636424 missense_variant p.Glu437Lys
C/T 6636464 synonymous_variant p.Arg423Arg
C/T 6636465 missense_variant p.Arg423Gln
T/G 6636468 missense_variant p.His422Pro
C/T 6636480 missense_variant p.Gly418Glu
C/T 6636481 missense_variant p.Gly418Arg
C/T 6636496 missense_variant p.Glu413Lys
G/A 6636498 missense_variant p.Ser412Phe
A/G 6636501 missense_variant p.Leu411Ser
A/G 6636505 missense_variant p.Phe410Leu
C/A 6636516 missense_variant p.Gly406Val
C/T 6636518 synonymous_variant p.Gln405Gln
A/G 6636527 synonymous_variant p.His402His
C/T 6636531 missense_variant p.Ser401Asn
G/A 6636533 synonymous_variant p.Cys400Cys
C/T 6636547 missense_variant p.Ala396Thr
A/G 6636595 missense_variant p.Phe380Leu
A/G 6636612 missense_variant p.Ile374Thr
G/A 6636642 missense_variant p.Ser364Phe
A/G 6636789 missense_variant p.Val315Ala
C/T 6636824 synonymous_variant p.Leu303Leu
A/C 6636877 missense_variant p.Ser286Ala
G/A 6636879 missense_variant p.Pro285Leu
A/C 6636901 missense_variant p.Ser278Ala
C/A 6637016 missense_variant p.Glu239Asp
T/A 6637017 missense_variant p.Glu239Val
C/T 6637018 missense_variant p.Glu239Lys
G/T 6637131 stop_gained p.Ser201*
C/T 6637136 stop_gained p.Trp199*
G/A 6637166 synonymous_variant p.Phe189Phe
G/A 6637181 synonymous_variant p.Asn184Asn
C/T 6637202 synonymous_variant p.Leu177Leu
G/T 6637253 missense_variant p.Asn160Lys
C/T 6637327 missense_variant p.Ala136Thr
C/T 6637341 missense_variant p.Gly131Asp
G/A 6637362 missense_variant p.Ala124Val
C/T 6637389 missense_variant p.Gly115Asp
G/A 6637404 missense_variant p.Thr110Met
C/T 6637415 synonymous_variant p.Pro106Pro
A/C 6637420 missense_variant p.Ser105Ala
G/A,* 6637424 synonymous_variant p.Val103Val
C/T 6637432 missense_variant p.Ala101Thr
G/A 6637451 synonymous_variant p.Ser94Ser
C/A 6637468 missense_variant p.Ala89Ser
G/A 6637478 synonymous_variant p.Ser85Ser
A/G 6637480 missense_variant p.Ser85Pro
C/T 6637524 missense_variant p.Arg70His

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_00380.1
MSHLSTLFMFAFFNFVAAVTEFDFGTLTLGSLKLLGDAHFNNGTVSLTRDLAVPTSSAGRALYSRPVRFRLPGNRSPASFTTFFSFSVANLNPSSIGGGLAFVLSPDDETIGDAGGFLGLSAAAAAADGGGGGFIAVEFDTLMDVEFKDINGNHVGVDLNSVVSSEVGDLESVGIDLKSGDLINAWIEFDGSSKGLSVWVSYSNLKPKDPVLSTSLDVDMYLSDFMYVGFSGSTQGSTEIHRIEWWSFGSSFDVAAGAAPPPPPATSLMNPTANVVKSAPPSPAPSNSEEKDSKSKSSCHNGLCKQNLGAVAGVVSAGAFVLAIFAGALIWFYSKKVKRVNKFDSLGPEIIKMPKQFTYKELKSATKCFNANRIIGHGAFGTVYKGVLPENGDTVAVKRCSHSSQGKNEFLSELSIIGSLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARTPLPWSHRRKILLGVASALAYLHQECENQVIHRDIKTSNIMLDEGFNARPTMRGVVQMLVGEAEVPIVPRTKPSTGFSTSHSYLLMSLQDSVSDCDGIITISTSTSENSFNLGDIV*


CDS Sequence:
>Vu_00380.1
ATGTCGCATCTTTCAACGCTCTTTATGTTTGCCTTCTTCAATTTCGTAGCTGCAGTCACCGAGTTCGACTTTGGAACTTTAACATTGGGAAGCCTCAAGCTTCTGGGGGACGCTCACTTTAACAACGGCACCGTAAGCCTCACGCGCGACCTCGCCGTTCCCACCTCCAGCGCCGGCAGAGCTCTTTACTCCCGTCCGGTTAGGTTCCGCCTTCCCGGTAACCGCTCTCCGGCCAGCTTCACCACCTTCTTTTCCTTCTCCGTCGCCAACCTCAACCCATCCTCCATCGGCGGCGGCCTCGCCTTCGTCCTCTCGCCGGACGATGAAACGATCGGCGATGCCGGTGGATTTCTTGGACTTAGCGCAGCCGCCGCCGCCGCGGATGGTGGCGGCGGCGGGTTTATTGCCGTGGAGTTTGATACGCTTATGGACGTAGAGTTTAAGGACATTAATGGGAACCACGTTGGGGTGGACTTAAACAGCGTTGTTTCGAGCGAGGTTGGTGATTTGGAGAGCGTTGGGATCGATCTGAAGAGCGGTGACCTAATTAACGCGTGGATTGAGTTCGATGGATCGAGCAAAGGATTAAGCGTGTGGGTTTCGTATTCCAATTTGAAACCGAAAGATCCCGTGTTGTCGACGAGCCTCGATGTGGATATGTATTTGAGTGATTTTATGTATGTGGGGTTCTCAGGTTCTACGCAGGGTAGCACAGAGATTCACAGAATAGAGTGGTGGAGTTTTGGCTCTTCTTTTGATGTTGCGGCAGGGGCGGCCCCACCGCCTCCGCCGGCGACGAGTCTGATGAACCCGACGGCGAATGTGGTGAAGTCGGCGCCTCCTTCTCCGGCTCCTTCTAACAGTGAAGAGAAAGATAGCAAAAGCAAATCGTCTTGCCACAATGGGTTGTGTAAGCAGAATTTAGGAGCGGTTGCTGGTGTTGTTAGTGCCGGGGCTTTTGTTTTGGCTATCTTTGCCGGTGCATTGATTTGGTTTTACTCTAAGAAGGTTAAGCGTGTTAACAAGTTTGATTCGCTTGGTCCGGAGATCATTAAAATGCCGAAGCAGTTTACCTACAAGGAGCTGAAGTCTGCTACCAAGTGTTTCAATGCTAATAGGATCATTGGTCATGGCGCGTTTGGGACTGTGTATAAGGGGGTTTTGCCTGAAAACGGGGACACTGTTGCGGTGAAGAGATGCAGCCATAGTAGTCAGGGGAAGAATGAATTTTTGTCTGAGTTGTCTATCATTGGGAGCCTGAGGCATCGGAATCTGGTTCGGCTTCAAGGGTGGTGCCATGAAAAAGGGGAGATTCTGCTGGTGTATGACTTGATGCCCAATGGGAGTTTGGACAAGGCTTTGTTCGAGGCTAGGACACCTCTTCCCTGGTCTCACCGGCGCAAGATTTTGTTGGGCGTGGCCTCTGCCTTGGCCTACTTGCATCAAGAGTGTGAGAATCAGGTGATTCACAGGGACATCAAGACTAGTAATATAATGTTGGATGAAGGGTTCAACGCCAGACCTACTATGAGGGGTGTGGTTCAGATGCTGGTGGGGGAAGCTGAAGTGCCTATTGTTCCAAGAACCAAGCCTTCCACAGGTTTCAGTACTTCCCACTCTTACTTACTGATGAGCTTGCAAGATAGTGTATCTGACTGTGATGGTATAATCACCATCTCTACATCCACATCAGAGAACAGCTTCAATCTTGGAGATATAGTCTGA


Promoter Sequence:
>Vu_00380::LG1:6637732-6639732(-)
TTGATTTAGATTCAAAATGTATTTATTAATATTAAATAAAAATGGAGAGAAGAGTAGGCGAGGGGTGAGAAATTTGAAGCGGTTGGTGGAAATGAAAATGAGAAATAGATCTGAGTTTGAGAATGGCGTCTGGTGAGCTTTGAGAAGAAGTAACCTAATTTTCAGAAAAGGCATTATAGAGTTTGAGTAGAAGTTTGGTAAAGTATGCCACTGCCACCAAAACCTTCCTTCCATACGCATATATACCTTTCTCACCAGTTTCCATAGAAAAAAACAACATCATCTTATCCATAATAACACCCTTTTCCTCCAACGCCTCCTTTCTCTCATCTTGCGTGTTCATCAATTCTCAACCCAACATTTTTTCATTCAGTAAAATAACATATCCTTCTCATCAAACTCAAACCGATGCATCATTTTCTGATTTCCAAGGAAAGGGAATAACTAAAGAAACAAAAAGTGATACACATTCACATACACACAAAAACAAAAGCAACTTCCTCACCCTTTCCCAGTTTCCTCCTTCTATAATTAAAACCATAAAAGAGTAAACCTTTTTTTCTCCCTTTATTCCTTTCTAATCCCATGCTATTTCGTAACAAGAATCTGGGCAACATTTAGTGAGAATGTGGTAAAATAATAAAAAGCTTTTAGTGAAAAAGGATAATATTGTATGGCATGTCAAGTTAGTGGTAGATGATGAACATCAAAATTATGGTATTATAATACTTTCTGGGTTATATGGTATTGACTCATAAAAACCATGCCTTGCACTTTCTCTTCTCTTTTTTTGGTAAAGTTTTTAACCCTTTTACTCTTTTTTAATAATTTTTTTCTTTAGTTCCTTTTTCCTATCTAAAAGACACCCTTTTCTCCTCTCCCTTATCCTATTATTCTCTTGTTAACCCTTTGGCTTCGCCTAAATATGCCACACTAAAATTATTTTTTTTCAACTAATCAAATTACCCTTTCGGCATGCAGGTCGTTTTGATTATAAAATGTGTTTGTATGATAACTTTTTTCGTATTTAAAGTTATTTATTTGCTAAAATAAATTCAAACCATTTAAATCAACTAACTCTATGGTTTTTCAATCAATTTTTTTCTAATGGTAGTTCAGATTTCGTTTCTTCCAAAATCGAATTCTGACTTACTTTTTAATCAATTTTCTTCTAATCCCAAATTCTGATTAAAAAAAAAGAATCATATTATTTATATAAATATTTGACGCAATATTTCATCTGCGTAAATTTTTAGTCTATATATGCTATTTGGGTAAAAGTATTCTGTCAGCATTTTTCTTTGTCTTTCGTCTTTCTCTTCTTTATGATATTGAGTAAAGAACATTTAAAATAATTGATGAAACGACAATTTGATTGTATGCACAACTTTTAGACAGCCAAACAATATAATGTTTTTATTGTAGAAAACATTTTGGGTCTTAATTTATCATCCTTTCACTTTTCCATCGAATGGAGAGTATAAAAAGTAGTATTTTATTTATAATAATAATAAATGAGAAGAAGGGTGGATTGAGCGGCGAGTGCACATGTCCGTGAGCGTGAGCGTGAGCGTGAGCGTGAGCGTGAGAGAGTGAGCGCAGCCACCACAAGAGAGAGAGCAAAGAATTTGTCTGCAGTTGAATTGAATTGAACGCATTCATACGCAAAGTCTCGTATCTTTCTTAAACATGAATTTAATCTCAATGATTAAACGTAATTAAGATGATTAAAAATGTAATGCGAATTATGTTGAATAGTTATTTGAAGATTATGGAGAAGAGTGTGTGTGAGAAAGATGAAAGAAATAACCGTTGAGAGAGAGTGGACAGGTGTCGACGTGGCGAAGAAGAGACTATCTTGGGATTCTCTGAACCCGTGAATTCTTCACTCTTTTTTCTCTTTCACTTTCACTCTCCTTACTTAGGGGAACAAACCAAACATACAACGTACAAAGGAACAAAACAGAATCAAATTCGCCAATTCAATCTCTGCTTCGCCA


Gene Sequence:
>Vu_00380(-)
ATGTCGCATCTTTCAACGCTCTTTATGTTTGCCTTCTTCAATTTCGTAGCTGCAGTCACCGAGTTCGACTTTGGAACTTTAACATTGGGAAGCCTCAAGCTTCTGGGGGACGCTCACTTTAACAACGGCACCGTAAGCCTCACGCGCGACCTCGCCGTTCCCACCTCCAGCGCCGGCAGAGCTCTTTACTCCCGTCCGGTTAGGTTCCGCCTTCCCGGTAACCGCTCTCCGGCCAGCTTCACCACCTTCTTTTCCTTCTCCGTCGCCAACCTCAACCCATCCTCCATCGGCGGCGGCCTCGCCTTCGTCCTCTCGCCGGACGATGAAACGATCGGCGATGCCGGTGGATTTCTTGGACTTAGCGCAGCCGCCGCCGCCGCGGATGGTGGCGGCGGCGGGTTTATTGCCGTGGAGTTTGATACGCTTATGGACGTAGAGTTTAAGGACATTAATGGGAACCACGTTGGGGTGGACTTAAACAGCGTTGTTTCGAGCGAGGTTGGTGATTTGGAGAGCGTTGGGATCGATCTGAAGAGCGGTGACCTAATTAACGCGTGGATTGAGTTCGATGGATCGAGCAAAGGATTAAGCGTGTGGGTTTCGTATTCCAATTTGAAACCGAAAGATCCCGTGTTGTCGACGAGCCTCGATGTGGATATGTATTTGAGTGATTTTATGTATGTGGGGTTCTCAGGTTCTACGCAGGGTAGCACAGAGATTCACAGAATAGAGTGGTGGAGTTTTGGCTCTTCTTTTGATGTTGCGGCAGGGGCGGCCCCACCGCCTCCGCCGGCGACGAGTCTGATGAACCCGACGGCGAATGTGGTGAAGTCGGCGCCTCCTTCTCCGGCTCCTTCTAACAGTGAAGAGAAAGATAGCAAAAGCAAATCGTCTTGCCACAATGGGTTGTGTAAGCAGAATTTAGGAGCGGTTGCTGGTGTTGTTAGTGCCGGGGCTTTTGTTTTGGCTATCTTTGCCGGTGCATTGATTTGGTTTTACTCTAAGAAGGTTAAGCGTGTTAACAAGTTTGATTCGCTTGGTCCGGAGATCATTAAAATGCCGAAGCAGTTTACCTACAAGGAGCTGAAGTCTGCTACCAAGTGTTTCAATGCTAATAGGATCATTGGTCATGGCGCGTTTGGGACTGTGTATAAGGGGGTTTTGCCTGAAAACGGGGACACTGTTGCGGTGAAGAGATGCAGCCATAGTAGTCAGGGGAAGAATGAATTTTTGTCTGAGTTGTCTATCATTGGGAGCCTGAGGCATCGGAATCTGGTTCGGCTTCAAGGGTGGTGCCATGAAAAAGGGGAGATTCTGCTGGTGTATGACTTGATGCCCAATGGGAGTTTGGACAAGGCTTTGTTCGAGGCTAGGACACCTCTTCCCTGGTCTCACCGGCGCAAGATTTTGTTGGGCGTGGCCTCTGCCTTGGCCTACTTGCATCAAGAGTGTGAGAATCAGGTGATTCACAGGGACATCAAGACTAGTAATATAATGTTGGATGAAGGGTTCAACGCCAGGTTGGGAGATTTTGGTTTGGCGAGGCAAACGGAGCATGATAAGTCGCCGGATGCCACCGTGGCTGCTGGGACAATGGGGTACCTGGCACCCGAGTATCTCCTTACAGGAAAGGCTACAGAGAAAACTGATGTGTTCAGCTATGGTGCAGTGGTTCTTGAGGTGGCAAGTGGGAGAAGACCGATAGAGAGGGATGGGAATGGAGGTGGTAAAGGTGGAATTAGCTGCAATTTGGTAGAATGGGTGTGGAGTTTGCACCGGGAAGGAAGGTTGCAATTGGCGGCTGATGCAAGGCTTGAAGGGGAGTTTGATGAGGCGGAGATGAGGAGGGTACTGTTGGTTGGGCTAGCTTGCTCTCACCCTGATCCATTGGCTAGACCTACTATGAGGGGTGTGGTTCAGATGCTGGTGGGGGAAGCTGAAGTGCCTATTGTTCCAAGAACCAAGCCTTCCACAGGTTTCAGTACTTCCCACTCTTACTTACTGATGAGCTTGCAAGATAGTGTATCTGACTGTGATGGTATAATCACCATCTCTACATCCACATCAGAGAACAGCTTCAATCTTGGAGATATAGTCTGA