Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_00303 LG1 5529754 5534184 PREDICTED: probable serine/threonine-protein kinase WNK4
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   protein autophosphorylation, intracellular signal transduction, protein phosphorylation, protein phosphorylation, protein phosphorylation, protein autophosphorylation, protein autophosphorylation, protein phosphorylation, protein phosphorylation, protein phosphorylation
Cellular Component   is active in   cytoplasm
Cellular Component   located in   cytoplasm, nucleus, cytoplasm
Molecular Function   enables   protein kinase activity, protein serine/threonine kinase activity, protein kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein kinase activity
Pathway   B 09181 Protein families: metabolism   C 01001 Protein kinases [BR:ko01001]
SNP Position Effect Amino acid change
G/A 5529754 splice_region_variant
A/G 5529812 3_prime_UTR_variant
T/A,G 5529833 3_prime_UTR_variant
G/A 5529912 3_prime_UTR_variant
G/A 5529959 3_prime_UTR_variant
A/T 5529988 3_prime_UTR_variant
A/G 5530022 3_prime_UTR_variant
T/G 5530089 3_prime_UTR_variant
T/G 5530189 3_prime_UTR_variant
C/T 5530225 3_prime_UTR_variant
C/T 5530304 missense_variant p.Arg594Lys
G/T 5530334 missense_variant p.Thr584Lys
G/T 5530349 missense_variant p.Pro579His
A/C 5530502 missense_variant p.Ile528Ser
A/G 5530510 synonymous_variant p.Asn525Asn
C/A 5530544 missense_variant p.Cys514Phe
T/G 5530612 synonymous_variant p.Pro491Pro
G/T 5530617 missense_variant p.Leu490Ile
T/C 5530711 synonymous_variant p.Arg458Arg
G/A 5530769 downstream_gene_variant
A/G 5530788 downstream_gene_variant
T/A 5530877 downstream_gene_variant
A/T 5531046 downstream_gene_variant
C/T 5531062 downstream_gene_variant
T/A 5531095 downstream_gene_variant
C/A 5531162 downstream_gene_variant
G/A 5531192 downstream_gene_variant
T/G 5531306 downstream_gene_variant
A/G 5531373 downstream_gene_variant
A/G 5531433 downstream_gene_variant
G/T 5531545 missense_variant p.Phe420Leu
G/C 5531811 downstream_gene_variant
A/G 5531858 downstream_gene_variant
G/A 5532055 synonymous_variant p.Thr323Thr
A/G 5532139 synonymous_variant p.Thr295Thr
A/T 5532254 missense_variant p.Leu257Gln
C/T,* 5532340 downstream_gene_variant
C/A 5532375 downstream_gene_variant
T/G 5532376 downstream_gene_variant
G/A 5532438 synonymous_variant p.Ser222Ser
C/T 5532477 synonymous_variant p.Leu209Leu
A/T 5532631 upstream_gene_variant
T/C 5532704 synonymous_variant p.Leu164Leu
C/G 5532922 upstream_gene_variant
T/C 5532931 upstream_gene_variant
G/C,A 5533095 upstream_gene_variant
A/C 5533099 upstream_gene_variant
G/T 5533186 upstream_gene_variant
T/C 5533354 synonymous_variant p.Arg61Arg
G/C 5533396 synonymous_variant p.Val47Val
A/G 5533498 upstream_gene_variant
C/A 5533508 upstream_gene_variant
C/G 5533601 upstream_gene_variant
C/A 5533672 upstream_gene_variant
A/C 5533680 upstream_gene_variant
C/A 5533682 upstream_gene_variant
A/C 5533743 upstream_gene_variant
T/A 5533749 upstream_gene_variant
T/C 5533773 upstream_gene_variant
G/A 5533792 upstream_gene_variant
T/G 5533829 synonymous_variant p.Thr9Thr
T/A 5533874 5_prime_UTR_variant
C/A 5533882 5_prime_UTR_variant
G/A 5533885 5_prime_UTR_variant
G/T 5533905 5_prime_UTR_variant
C/T 5533919 5_prime_UTR_variant
G/A 5533923 5_prime_UTR_variant
G/A 5533925 5_prime_UTR_variant
C/A 5533928 5_prime_UTR_variant
G/A 5533949 5_prime_UTR_variant
G/C 5533952 5_prime_UTR_premature_start_codon_gain_variant
T/A 5533973 5_prime_UTR_variant
A/G 5533974 5_prime_UTR_variant
C/G 5533986 5_prime_UTR_variant
G/A 5534087 5_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_00303.1
MAEHCYVETDPTGRYGRFGDVLGKGAMKTVYKAIDEVLGIEVAWNQVRLNEALRTPEDLQRLYSEVHLLSTLKHQSIIRFYTSWIDVDNRAFNFITELFTSGSLREYRKKYERVSIQAIKNWARQILQGLVYLHGHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSQSAHSVIGTPEFMAPELYEEEYNELADVYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPMAFFRIEDMEAQRFIGKCLLPAEKRPSAKELLLDSFLASDDPSSTTKFPIQKPFLNATEMEKLQLNDDLPRTGMKVIGKLNPEDDTIFLKVQISDKNGSVRNVFFPFDIFNDTPIDVATEMVKELEISDWEPFEIANMIDREISALLPQKRQTSCSDAFHTFSYIDDDDCDDNDAPHHHFRSFSSSSSFQESMPDFVSNAEEISTGYYWLHDDSHDDTSSRCSSQGTYSNLNYSSVDDHQDQYNMPSLRKDKLPIMKSHSKGKKASPGEDLSNFNQCKLMAGSQVPFNSKIKMMMNNQRLTRNRSLIDIRSQLLHRSLVEEVNKRRLFKTVGAVENIGFQAPCDVTTKRSHHVSAARNENCSRRGKGEKNKR*


CDS Sequence:
>Vu_00303.1
ATGGCAGAACATTGTTATGTGGAAACAGACCCAACTGGTCGCTATGGCAGGTTTGGAGATGTTCTTGGAAAAGGGGCAATGAAGACTGTGTACAAAGCAATTGATGAGGTTCTTGGAATTGAGGTAGCATGGAACCAAGTCAGACTCAACGAGGCTCTTCGCACTCCTGAAGATTTGCAGAGACTTTACTCAGAGGTTCATCTCCTCAGTACCCTCAAGCATCAGTCCATCATAAGATTCTACACTTCTTGGATTGATGTTGATAACAGGGCCTTCAACTTTATCACAGAATTGTTCACATCAGGGTCACTTAGAGAATACAGGAAGAAATATGAGCGTGTTAGCATACAAGCTATAAAGAATTGGGCTCGCCAAATCTTACAAGGTCTTGTTTATCTACATGGCCATGATCCACCAGTTATACACAGGGACCTTAAATGTGATAACATATTCGTTAATGGTCATCTTGGACAAGTAAAAATTGGTGACCTAGGACTTGCTGCAATTCTTCGTGGATCCCAATCAGCACACAGTGTCATAGGTACCCCTGAGTTCATGGCACCAGAGTTGTACGAGGAAGAATACAATGAACTTGCTGATGTGTACTCATTTGGCATGTGTGTGTTGGAAATGCTTACATCGGAATATCCATATAGTGAATGTTCCAATCCAGCCCAAATCTACAAGAAAGTGACATCGGGAAAACTACCAATGGCGTTTTTTCGGATTGAAGACATGGAAGCACAAAGGTTTATTGGAAAATGCTTGCTACCTGCAGAAAAGAGGCCTTCGGCAAAAGAATTGTTGCTTGACTCGTTTCTTGCATCTGATGATCCATCATCAACAACGAAATTTCCAATTCAGAAGCCATTTTTAAATGCCACTGAGATGGAGAAACTGCAATTAAATGATGATCTTCCGAGGACTGGAATGAAAGTGATAGGAAAACTGAATCCTGAAGATGATACCATCTTTCTCAAAGTACAAATTTCTGATAAGAATGGTTCTGTTAGGAATGTATTCTTTCCCTTTGACATTTTCAATGACACCCCTATTGATGTTGCAACTGAAATGGTGAAAGAGTTGGAGATTTCTGATTGGGAACCTTTTGAGATTGCAAATATGATTGATAGAGAGATATCTGCTCTGCTACCTCAGAAGAGGCAAACTAGCTGTTCAGATGCCTTTCACACATTCAGTTATATAGATGATGATGATTGTGATGATAATGATGCACCTCATCATCATTTTCGCTCCTTCTCTTCAAGTTCATCATTCCAAGAATCTATGCCAGATTTTGTCAGTAATGCTGAGGAAATATCAACTGGATATTATTGGCTCCATGATGATTCGCATGATGATACCAGTTCACGATGCTCTTCACAGGGGACATATTCCAACCTGAATTACTCTTCTGTGGATGATCATCAGGATCAGTACAATATGCCTTCTTTGAGAAAAGATAAACTTCCAATCATGAAGAGTCACAGCAAGGGCAAAAAGGCTTCCCCTGGCGAAGACTTGAGCAATTTCAACCAATGTAAACTCATGGCAGGATCACAGGTTCCTTTTAATAGTAAAATTAAGATGATGATGAACAATCAAAGATTAACAAGGAACAGGTCATTGATTGATATAAGGAGCCAACTATTACACCGATCACTGGTTGAGGAGGTCAACAAAAGAAGGTTGTTCAAGACAGTTGGTGCTGTAGAAAATATTGGATTTCAGGCACCTTGTGATGTTACAACAAAAAGGTCACATCATGTATCTGCTGCTAGGAATGAGAACTGTTCAAGGAGGGGCAAGGGGGAAAAAAATAAGAGATGA


Promoter Sequence:
>Vu_00303::LG1:5534184-5536184(-)
TTGTCGTCCTCACGTGGTGTAAAAGTGTCAATTGAATCCAAACATAGAAAAAATTTGTGTCAAAGTAGTCATCTCCGTTAAATACACACTAACGGTGTTAAGTGGCTGATTATTTGGCATTAGAAAATTAAAACGTGGCAAATGAGTCACAGTAGTGGTAATGACGTGTCAATGACGTGGCATACGGCAATGAAACTTTCAAATCTTCCTCATTCTTCCAGTTCAGAAAGACATGAGACTCTCTATTCTTTCAGCTAGGAACTCCGACGAAGGATCGTCTCCCTGCGCGCATACGGCTGCCCCCACCAAACCGACCACCGCGAAGAGGCCCTCCGCCTGGTCCATGACGTCACCGGCGACCCCAAGCGCCACCAGGATCGCGGCTGGCCGCGGTGTCAGGTCCTCTCTCCTGCCCCCTTTCCGCGCGATAGAGGAGAAACTCTTTCAGTCCGACACCGGCCTCCGCTTGGGCACGTCCAGCCACCGGAGGCAGCGTTCAGGCCCTTCTCACCCTCCGATTCGGCGCGAGTTCTCTTCCTTCTCCATCGAACACCGCCAGTGCCACGAAACGCGGCCAAGGTCGCCGCCAGTTACCGAACCCCGAACACCACCTCTGAGGCAACGAGCGAAACCCTACCGTCGACGAAGCTAGTCACCATCGTTCTCGCCGGAGTTCGTTTCGTCATCGACGCCACCGATGGCGCCTCTCCCTCTCTTTTCTATCCTTTTTATTTACTAGTTGGTTTGGGATTTGGTTCTTGGAATGGTTGATGGATGATCCAGTGAGAAAAATGGGGATGAATTTGACGAATTCTAGAACGGAAAGGGTGGAAATCCGAGAGGGGCTGATCACGGGTGTTGGAGATGAAGGCCCCTGTTGGAGATGAAGGCCCCTGTTGGAGATGAAGGCCCATGAGGTAAGGAAGAAGATGAGGGTGATGAGCAGAGGGGTCAGTGCCACGAAGGGGTGAAGATTGATGATGGTCGTTGGCCGTATGCCACGTCATTACCACTACTGTGACTCATTTGCCACGTTTTAATTTTCTAATGCCAAATAATCAGCCACTTAACACCGTTAGTGTGTATTTAACGGAGATGACTACTTTGACACAAATTTTTTCTATGTTTGGATTCAATTGACACTTTTACACCACGTGAGGACGACAATGAAACTTTTTTAAAAATGAGGATGAATTTGACACAATTCAACCAAACTGGGGACAAAGGAAACAATTAAACCTAAATTAAATTCATATCATTGAACATGACCAAAAGAGGTAAAAGAGGTACAATTATGCCCTAACATTAATATATGTATACACATACTTAAAATCAATTGAGAGAAGCCATATAATCCAAAAGAAAAAGTAGAGAAATTTATTGCTGACAGAGCACTTTACAAGTTGTCTTTCTCCACTGAGTGACCCCACCCTTTGGCACACAGGACACAGCAACAATACTGTCGAGTGATTCAAAAGGGGTTCCAACACCAAACCCACTTCCATCCCAACTTCATTTCATGCTCTGGTTTTACTCTCTTTATCACTATCATTAATATTATAAGAACATTTTTTTCACCAACCATTGTTCATTATAAATTTACTCTACAAAGCCTGAAACCACACCAAAATCCTCACCTTCACAACTTCATCTCCTCTCTGTAATAGTTCCCTCTCTTCATTATCCCACTCTGTTTTTCTCTTCTTGCTCTGTTTTATTGGCCTTCCCCTGTTACTCACCAATGATTACACCAAAGCGGGTCCACAGATTCTTCAAGTTCCGTGCCTTAGTGCATTCCCTTATCTATATGCCAACCATTCTTTGTGCCTTGTGAATGCCCAAAACTGACCCTGTGCTCAACCCTTATCTGCCACAAGTCCTCTGCACCAAAAGGAAGTACTTTGACACCAACCTGTCACTTTCCTTGTTAAATAGTACCTCCTTATTCTCCCATCCAATCACCCGCACGTTGCCCCACTTTCTCATCCTTGCAACTTTCG


Gene Sequence:
>Vu_00303(-)
TTTTCAAATAGAACAGAAACTAGAAAAATCAAATGGTTGCTAAGGACTATAACCACTTAACATGTACGGTTCTGAACATGGGCAAAATCATGCAGAGCATTGACTATTCTACACTTTTCTGGCTATTTTTTGGGGTCTTCTCTCACGTAAATCATGAAGGAAAGCCTCGAATCTAGGATAATACCATAAGACCATTTTGTTCCGCTTTTATATATTTTTTTATCCCGTTCTTCTTCTCTGCACAAAGAAAGCTGCAGTCCACAAGGTATATTGTTTCAGCAAATATAAGAGGCTGTTGTCAAGTTAGTACATATAGATAACAATCGATCATGGCAGAACATTGTTATGTGGAAACAGACCCAACTGGTCGCTATGGCAGGGTAAGTTCTAATCCCCTGTTTATCTTTCTCTATATTTTATTCCATTTCTTTAGTCATTTGTTATGTTAGGGTTAAAAATATATTTCAATCCTTGTTTTTGTTCATAATAAGTATGGTTTTGTGGTTTTAGATGAGACATATTTTGGCCTACATGGTTAGTTTTGTATGAAAGTTTAATCTGTGAAGAAGTTATTATTACTCTTGGATAGGTAATCCACATAATTGTATATAATTATGGAGAGGAAATCCTTTGTTTATAAAACTGTGTGTATTATCAATTATAAAGGATTGATATTGGATGTTTGTTATTGATTATTAGTTTGGAGATGTTCTTGGAAAAGGGGCAATGAAGACTGTGTACAAAGCAATTGATGAGGTTCTTGGAATTGAGGTAGCATGGAACCAAGTCAGACTCAACGAGGCTCTTCGCACTCCTGAAGATTTGCAGAGACTTTACTCAGAGGTTCATCTCCTCAGTACCCTCAAGCATCAGTCCATCATAAGATTCTACACTTCTTGGATTGATGTTGATAACAGGGCCTTCAACTTTATCACAGAATTGTTCACATCAGGGTCACTTAGAGAGTAACTAAACTTCCTTTCCAACTATAAATTAGGCAATTACTCAGTCCCATTATGTAGTTCATCACAAAATTGAGCAACCTAGGAATAACCGTCATCACAACGATTATGTTTGATACTAAATAGGCTATTGGAACTTTTAACAATTATGAGAATACAATTATGAGCGTAAATGTATGCTGTGACTTTATGCTGTATATGAAAAGCATATAAGAACATAAAGTTGCAATTTACATTTCATTCACTGATTTGTTTTCAGTATTTTGAATGATTAGTCCTTAACTTCTGGTGAGAGAATACGGAGTTCATTAGAAAATTAATTGATGATTTTCTTGCATATGCAGATACAGGAAGAAATATGAGCGTGTTAGCATACAAGCTATAAAGAATTGGGCTCGCCAAATCTTACAAGGTCTTGTTTATCTACATGGCCATGATCCACCAGTTATACACAGGGACCTTAAATGTGATAACATATTCGTTAATGGTCATCTTGGACAAGTAAAAATTGGTGACCTAGGACTTGCTGCAATTCTTCGTGGATCCCAATCAGCACACAGTGTCATAGGTATTCACTTTTTCTCCAATGACTGTTTCACATAGAGCAGATACTAAGAAACATTATTATTTGTCATTGTCAATTAAAATTTTCCCCCTTAGGTACCCCTGAGTTCATGGCACCAGAGTTGTACGAGGAAGAATACAATGAACTTGCTGATGTGTACTCATTTGGCATGTGTGTGTTGGAAATGCTTACATCGGAATATCCATATAGTGAATGTTCCAATCCAGCCCAAATCTACAAGAAAGTGACATCGGTAACTTCGAATTCTGGTCTAAGTTTCTAGAGATATGTATAGCTGGTTGTTTTATTTAGAAAGAGTATTTCATATTTCAGGGAAAACTACCAATGGCGTTTTTTCGGATTGAAGACATGGAAGCACAAAGGTTTATTGGAAAATGCTTGCTACCTGCAGAAAAGAGGCCTTCGGCAAAAGAATTGTTGCTTGACTCGTTTCTTGCATCTGATGATCCATCATCAACAACGAAATTTCCAATTCAGAAGCCATTTTTAAATGCCACTGAGATGGAGAAACTGCAATTAAATGATGATCTTCCGAGGACTGGAATGAAAGTGATAGGAAAACTGAATCCTGAAGATGATACCATCTTTCTCAAAGTACAAATTTCTGATAAGAATGGTTCGTAATCTTTTTCTCAACACAATAACCAGTTTGTTGATTTTAAGGAAAGCTCTCTTAATGTTACTTAAGACTCTGAATTACATGCTTCTTTCCATTTGACCTTTAAACAATTGCACATGTTTTGTTAATGAATTTCAGTCTTTTATTAGCTAAACTTTATTAGTAAACATCATCATATTAAAGTAACAATAATTGTTTTGCTGCCTCTTTCTGCAGGTTCTGTTAGGAATGTATTCTTTCCCTTTGACATTTTCAATGACACCCCTATTGATGTTGCAACTGAAATGGTGAAAGAGTTGGAGATTTCTGATTGGGAACCTTTTGAGATTGCAAATATGATTGATAGAGAGATATCTGCTCTGCTACCTCAGAAGAGGCAAACTAGCTGTTCAGATGCCTTTCACACATTCAGTTATATAGATGATGATGATTGTGATGATAATGATGCACCTCATCATCATTTTCGCTCCTTCTCTTCAAGTTCATCATTCCAAGAATCTATGCCAGATTTTGTCAGTAATGCTGAGGAAATATCAACTGGATATTATTGGCTCCATGGTATGTGTACTTGGTCCTTTTCCTTATGATATTGTGAATGTCTTGTATAATAGCTCCATATATTGAATTGTAGACCACCTTCACACTAGGAAGAAATGTAGATACTTCAAATGGCCATAGTCTAAGGCTACTGTGGTTGGAACTAATCTTCACATGACAATGTTATTAACTTTTTCTTATAAATTGGAAAAATTCAACTACATGTATCAGGAATTCATCAAGACTACGAATATGGGATGGTCTTGGACTAGTAAAAGACCTCTTTAGCAATTCACAATTAGTCTACTTAGAAAAAACGTTTTCATAAGCTTAAAGCTAAAACTTGCTTACACGGAAGCTAATTTGTTGGAATTATTTTCTATTAAGTTCTCTAATATTTAACTTTTAATTTTTGTGTGAACTAATGTTTTAGTTTACTTCTATGAAACTAAATAATTCTCTAAAAATGTTGTTGTACCTAAATACAATGTACATAAATACGTGTCAGAGAGCCCCATAATTTATTTATTTATTCCAGAAAATTATCTTATGTATCATGATTCAACTGTGATATATGACTTTATCTACTCCTCTTAATTTTTAAAGCTGATTTTTTGTTTTGGTCAACTATAGCTGTATTAAATAGTAGGCTTCTTTTGGATAGGATTATTGATGTTTTTTTGAAAAACATGTAATCTATTGTCGGTTTAACTATAGTAACATGAGAAACTATTGTTGCAGATGATTCGCATGATGATACCAGTTCACGATGCTCTTCACAGGGGACATATTCCAACCTGAATTACTCTTCTGTGGATGATCATCAGGATCAGTACAATATGCCTTCTTTGAGAAAAGATAAACTTCCAATCATGAAGAGTCACAGCAAGGGCAAAAAGGCTTCCCCTGGCGAAGACTTGAGCAATTTCAACCAATGTAAACTCATGGCAGGATCACAGGTTCCTTTTAATAGTAAAATTAAGATGATGATGAACAATCAAAGATTAACAAGGAACAGGTCATTGATTGATATAAGGAGCCAACTATTACACCGATCACTGGTTGAGGAGGTCAACAAAAGAAGGTTGTTCAAGACAGTTGGTGCTGTAGAAAATATTGGATTTCAGGCACCTTGTGATGTTACAACAAAAAGGTCACATCATGTATCTGCTGCTAGGAATGAGAACTGTTCAAGGAGGGGCAAGGGGGAAAAAAATAAGAGATGAAAACATTTACATGTGTCTCTTGAACATTGGACAATAAATAAATGGAATGCATAGCCTTTTGTGTTATATAAGGTTGAGAAATTATCTGGTTGATTAAATATCGGGTTAATTATCAGATTTCCAACGTAGGAAATGTCAATACTAAAGTTTGGCCACTAGCATAGGAAAAAATAATTGCACTGTTTTGGATGAGTTAGGTTCAGATGAATGTGATTAAGTGTATAGATGTACATGGAGCGTGCTTAGCAAAAAATAATTGATTTTCGTGGGATGAAAGTCTTCTTAGAATGCTGGTCCAATGTGTTGTACTATTTCTGTTCTGTAGATGAAAATTAAACTAATCGGTGCAGCTGGTCGACTAGAATATGCTGATGCCAGTGCTTTTCTTTTACCTTTGCTTTCTCATTTTTGGAGCATGCATAGATTTGCATGCTGTCAGATATGAATGTATGTGCGCACTTTGCTGTCAATTATAAAAATTAAGAGCCATGTTTCCAAACC